RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Tcp11l1Q8BTG3 509 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Zfp113Q8C689 439 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 SltmQ8CH25 1031 aaKnown RBP12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Enox2Q8R0Z2 598 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ddx27Q921N6 760 aaKnown RBP12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cabp5Q9JLK3 173 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Map3k15A2AQW0 1331 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Col20a1Q923P0 1320 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Pfkfb1P70266 471 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Aak1Q3UHJ0 959 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Slc51aQ8R000 340 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Slfn1Q9Z0I7 337 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 AsnsQ61024 561 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ciapin1Q8WTY4 309 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 CenpqQ9CPQ5 267 aa12.2□□□□□ -0.46
Msh3-202ENSMUST00000185852 Hvcn1Q3U2S8 269 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ddx10Q80Y44 875 aaKnown RBP12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Exoc1Q8R3S6 894 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cnpy3Q9DAU1 276 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Capn12Q9ER56 720 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Crb1Q8VHS2 1405 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Zscan18E9PUD6 809 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 ItpripQ3TNL8 555 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Gpbp1Q6NXH3 473 aaKnown RBP12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Atxn2lQ7TQH0 1049 aaKnown RBP12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ano10Q8BH79 659 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Nap1l5Q9JJF0 156 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Aox1O54754 1333 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 A430078G23RikE9Q7Y4 484 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 TrdnE9Q9K5 693 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Eef2kO08796 724 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Kiaa1211Q5PR69 1207 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Glis3Q6XP49 780 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Hs2st1Q8R3H7 356 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ces1Q8VCC2 565 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 SrrtQ99MR6 875 aaKnown RBP12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 DmtnQ9WV69 405 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Epb41l3Q9WV92 929 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Msh6P54276 1358 aaKnown RBP12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 PplQ9R269 1755 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 Camta1A2A891 1682 aa12.19□□□□□ -0.46
Msh3-202ENSMUST00000185852 1700113H08RikE9Q9Q5 327 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Chmp6P0C0A3 200 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cyp2d9P11714 504 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Rc3h1Q4VGL6 1130 aaKnown RBP12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Mcm7Q61881 719 aaKnown RBP12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Zcwpw1Q6IR42 630 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ctdp1Q7TSG2 960 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ubxn10Q8BG34 277 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cacnb1Q8R3Z5 597 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ndufb9Q9CQJ8 179 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Glt1d1A4FUP9 346 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Rnf216P58283 853 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Senp6Q6P7W0 1132 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cdk8Q8R3L8 464 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ttc8Q8VD72 515 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Tubgcp2Q921G8 905 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Nol7Q9D7Z3 254 aaKnown RBP12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Pkd2l2Q9JLG4 621 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Calcoco2A2A6M5 331 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ccdc78D3Z5T1 437 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Parp1P11103 1013 aaKnown RBP12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Spata5Q3UMC0 893 aaKnown RBP12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Exoc3Q6KAR6 755 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Brms1Q99N20 246 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Atp10bB1AWN4 1474 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 MetP16056 1379 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cdkn1cP49919 348 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Fxr1Q61584 677 aaKnown RBP12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Sh3d21Q7TSG5 549 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 CenphQ9QYM8 241 aa12.18□□□□□ -0.46
Msh3-202ENSMUST00000185852 Med23Q80YQ2 1367 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Pde4aO89084 844 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Psd3Q2PFD7 1037 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 PaoxQ8C0L6 504 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Lrrd1Q8C0R9 853 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Atxn7Q8R4I1 867 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Galnt15Q9D2N8 638 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Usp21Q9QZL6 566 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 AW822073A0A0N4SUK1 652 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ifi207E9Q3L4 978 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ankrd35E9Q9D8 996 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Stag2O35638 1231 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Taf3Q5HZG4 932 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ctr9Q62018 1173 aaKnown RBP12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Hoxa13Q62424 386 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 GlyctkQ8QZY2 523 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Rnf34Q99KR6 376 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ccdc7Q9D541 371 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Lgr5Q9Z1P4 907 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Zc3h13E9Q784 1729 aaKnown RBP12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Myom1Q62234 1667 aaKnown RBP12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cyp2c68K7N6C2 491 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 D1Pas1P16381 660 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Rab11fip4Q8BQP8 635 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 IarsQ8BU30 1262 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Prkab1Q9R078 270 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Usp32F8VPZ3 1604 aa12.17□□□□□ -0.46
Msh3-202ENSMUST00000185852 Nrxn3Q6P9K9 1571 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 LdhaP06151 332 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms