RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 CenpbP27790 599 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Sept2P42208 361 aaKnown RBP23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Zbtb39Q6PDK0 712 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Tacc1Q6Y685 774 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Tnpo1Q8BFY9 898 aaKnown RBP23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Terb1Q8C0V1 768 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Il21rQ9JHX3 529 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Dock5B2RY04 1868 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Palm3A2TJV2 734 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Zscan18E9PUD6 809 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Dnajc2P54103 621 aaKnown RBP23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Sema3eP70275 775 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Utp18Q5SSI6 552 aaKnown RBP23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Calhm4Q8CE93 315 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Pms1Q8K119 917 aa23.4■■□□□ 1.34
Lig3-209ENSMUST00000173009 Rgs12Q8CGE9 1381 aa23.39■■□□□ 1.34
Lig3-209ENSMUST00000173009 Prr16A3KMN5 304 aa23.39■■□□□ 1.33
Lig3-209ENSMUST00000173009 Irx3P81067 507 aa23.39■■□□□ 1.33
Lig3-209ENSMUST00000173009 Sec23aQ01405 765 aa23.39■■□□□ 1.33
Lig3-209ENSMUST00000173009 Usp50Q6P8X6 390 aa23.39■■□□□ 1.33
Lig3-209ENSMUST00000173009 Pitpnm2Q6ZPQ6 1335 aa23.38■■□□□ 1.33
Lig3-209ENSMUST00000173009 Sema3fO88632 785 aa23.38■■□□□ 1.33
Lig3-209ENSMUST00000173009 Myl3P09542 204 aa23.38■■□□□ 1.33
Lig3-209ENSMUST00000173009 Trpv1Q704Y3 839 aa23.38■■□□□ 1.33
Lig3-209ENSMUST00000173009 Hps6Q8BLY7 805 aa23.38■■□□□ 1.33
Lig3-209ENSMUST00000173009 Rbm28Q8CGC6 750 aaKnown RBP23.38■■□□□ 1.33
Lig3-209ENSMUST00000173009 Gpr108Q91WD0 569 aa23.38■■□□□ 1.33
Lig3-209ENSMUST00000173009 Llgl2Q3TJ91 1027 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 Senp5Q6NXL6 749 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 RubcnQ80U62 956 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 9230110C19RikQ8CC70 267 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 Mtmr4Q91XS1 1190 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 Cyp27a1Q9DBG1 533 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 WtapQ9ER69 396 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 Celf2Q9Z0H4 508 aaKnown RBP23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 TbcaP48428 108 aaKnown RBP23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 WaplQ65Z40 1200 aaKnown RBP23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 Ddx55Q6ZPL9 600 aaKnown RBP23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 Rufy3Q9D394 469 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 S1pr4Q9Z0L1 386 aa23.37■■□□□ 1.33
Lig3-209ENSMUST00000173009 Gprin1Q3UNH4 932 aa23.36■■□□□ 1.33
Lig3-209ENSMUST00000173009 Prr7Q3V0I2 269 aa23.36■■□□□ 1.33
Lig3-209ENSMUST00000173009 Eme2Q56A04 373 aa23.36■■□□□ 1.33
Lig3-209ENSMUST00000173009 Glra4Q61603 456 aa23.36■■□□□ 1.33
Lig3-209ENSMUST00000173009 Trmt112Q9DCG9 125 aa23.36■■□□□ 1.33
Lig3-209ENSMUST00000173009 Suclg2Q9Z2I8 433 aa23.36■■□□□ 1.33
Lig3-209ENSMUST00000173009 A430078G23RikE9Q7Y4 484 aa23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Ireb2Q811J3 963 aaKnown RBP23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Sulf1Q8K007 870 aa23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Cchcr1Q8K2I2 770 aa23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Paf1Q8K2T8 535 aa23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Mtx1P47802 317 aa23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Usp5P56399 858 aaKnown RBP23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Pip5kl1Q6U7H8 395 aa23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Lonrf3Q9D4H7 753 aa23.35■■□□□ 1.33
Lig3-209ENSMUST00000173009 Stx8O88983 236 aa23.34■■□□□ 1.33
Lig3-209ENSMUST00000173009 Alppl2P24823 529 aa23.34■■□□□ 1.33
Lig3-209ENSMUST00000173009 Scfd2Q8BTY8 684 aa23.34■■□□□ 1.33
Lig3-209ENSMUST00000173009 DymQ8CHY3 669 aa23.34■■□□□ 1.33
Lig3-209ENSMUST00000173009 Tmem47Q9JJG6 181 aa23.34■■□□□ 1.33
Lig3-209ENSMUST00000173009 Mmp10O55123 476 aa23.33■■□□□ 1.33
Lig3-209ENSMUST00000173009 Gja3Q64448 417 aa23.33■■□□□ 1.33
Lig3-209ENSMUST00000173009 Garem2Q6PAJ3 880 aa23.33■■□□□ 1.33
Lig3-209ENSMUST00000173009 Tmem59lQ7TNI2 337 aa23.33■■□□□ 1.33
Lig3-209ENSMUST00000173009 KinQ8K339 391 aa23.33■■□□□ 1.33
Lig3-209ENSMUST00000173009 Pof1bQ8K4L4 587 aa23.33■■□□□ 1.33
Lig3-209ENSMUST00000173009 SmapQ9R0P4 181 aaKnown RBP23.33■■□□□ 1.33
Lig3-209ENSMUST00000173009 Atp8b3Q6UQ17 1335 aa23.33■■□□□ 1.32
Lig3-209ENSMUST00000173009 Vmn2r23E9PXI5 849 aa23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Sptbn5F6UCX4 1208 aa23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Ttll1Q91V51 423 aa23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Ccdc7Q9D541 371 aa23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Eid1Q9DCR4 169 aa23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Ddx49Q4FZF3 480 aaKnown RBP23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Bcs1lQ9CZP5 418 aa23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Prg3Q9JL95 222 aa23.32■■□□□ 1.32
Lig3-209ENSMUST00000173009 Rbm46P86049 533 aa23.31■■□□□ 1.32
Lig3-209ENSMUST00000173009 Mad2l2Q9D752 211 aa23.31■■□□□ 1.32
Lig3-209ENSMUST00000173009 Smarce1O54941 411 aaKnown RBP23.3■■□□□ 1.32
Lig3-209ENSMUST00000173009 Scg2Q03517 617 aa23.3■■□□□ 1.32
Lig3-209ENSMUST00000173009 Cnksr2Q80YA9 1032 aa23.3■■□□□ 1.32
Lig3-209ENSMUST00000173009 Scfd1Q8BRF7 639 aaKnown RBP23.3■■□□□ 1.32
Lig3-209ENSMUST00000173009 Nop2Q922K7 793 aaKnown RBP23.3■■□□□ 1.32
Lig3-209ENSMUST00000173009 Prkab1Q9R078 270 aa23.3■■□□□ 1.32
Lig3-209ENSMUST00000173009 SynrgQ5SV85 1306 aa23.3■■□□□ 1.32
Lig3-209ENSMUST00000173009 Has3O08650 554 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Cyp26a1O55127 497 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 ThbdP15306 577 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 PtpraP18052 829 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Secisbp2lQ6A098 1086 aaKnown RBP23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 BrapQ99MP8 591 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Cnpy3Q9DAU1 276 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Frmpd4A2AFR3 1320 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 1700006A11RikB9EHI3 544 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Me1P06801 572 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 SobpQ0P5V2 864 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 LrmpQ60664 539 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Sirt2Q8VDQ8 389 aa23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Upf1Q9EPU0 1124 aaKnown RBP23.29■■□□□ 1.32
Lig3-209ENSMUST00000173009 Cct2P80314 535 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 98.5 ms