RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Saal1Q9D2C2 474 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Rmdn1Q9DCV4 305 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Mcm6P97311 821 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Nlrp1bA1Z198 1177 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Smc5Q8CG46 1101 aaKnown RBP20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Kdm5cP41230 1554 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Il7P10168 154 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 PparaP23204 468 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Vmn1r191Q8K4D0 298 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Tbc1d22aQ8R5A6 516 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Cabp7Q91ZM8 215 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Fam83bQ0VBM2 1012 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Ccdc189Q6NZQ0 333 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Rfc4Q99J62 364 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Abcc6Q9R1S7 1498 aa20.54■□□□□ 0.88
Sort1-203ENSMUST00000135636 Prss51A0A286YDY8 319 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Eif3j1Q3UGC7 261 aaKnown RBP20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Eif3j2Q66JS6 263 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Gigyf2Q6Y7W8 1291 aaKnown RBP20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Adgrb2Q8CGM1 1561 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Tagap1P0CAX8 505 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Fgfr1opQ66JX5 399 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Mysm1Q69Z66 819 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Spata16Q8C636 571 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Strn3Q9ERG2 796 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Gm4841E9QAA8 417 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Cavin1O54724 392 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Trim6Q8BGE7 488 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Ano10Q8BH79 659 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 HhatQ8BMT9 499 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Ubn2Q80WC1 1314 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Col20a1Q923P0 1320 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Pdia4P08003 638 aaKnown RBP20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Ctnna3Q65CL1 895 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 4930504O13RikQ8C5Z9 145 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Cplx3Q8R1B5 158 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Uspl1Q3ULM6 1089 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Ddx27Q921N6 760 aaKnown RBP20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 4921530L21RikQ9CQ47 274 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Rufy3Q9D394 469 aa20.53■□□□□ 0.88
Sort1-203ENSMUST00000135636 Pdzrn3Q69ZS0 1063 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Fbxo11Q7TPD1 930 aaKnown RBP20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 LlphQ9D945 130 aaKnown RBP20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Appbp2Q9DAX9 585 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Twf2Q9Z0P5 349 aaKnown RBP20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Trim66Q924W6 1242 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Wdr17E9Q271 1322 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Veph1A1A535 833 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Ccdc169Q8BXX9 214 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Noxred1Q9D3S5 366 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Traf5P70191 558 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Pde1bQ01065 535 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Znf692Q3U381 531 aa20.52■□□□□ 0.88
Sort1-203ENSMUST00000135636 Zscan18E9PUD6 809 aa20.52■□□□□ 0.87
Sort1-203ENSMUST00000135636 Pde6aP27664 859 aa20.52■□□□□ 0.87
Sort1-203ENSMUST00000135636 Samhd1Q60710 627 aa20.52■□□□□ 0.87
Sort1-203ENSMUST00000135636 Ireb2Q811J3 963 aaKnown RBP20.52■□□□□ 0.87
Sort1-203ENSMUST00000135636 Slc12a8Q8VI23 705 aa20.52■□□□□ 0.87
Sort1-203ENSMUST00000135636 Rps6ka2Q9WUT3 733 aa20.52■□□□□ 0.87
Sort1-203ENSMUST00000135636 Terf2O35144 541 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Fam178bQ24JP3 464 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Ces3aQ63880 571 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Dclk2Q6PGN3 756 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Ces3bQ8VCU1 571 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Rps6kb1Q8BSK8 525 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 PigbQ9JJQ0 542 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Rfx7F8VPJ6 1459 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Eif4g3Q80XI3 1579 aaKnown RBP20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Pard3Q99NH2 1333 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Kcng1A2BDX4 514 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Gm1993A6X8I0 212 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 SlxD3Z347 212 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Sfi1Q3UZY0 1216 aaKnown RBP20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Ccdc57Q6PHN1 1016 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Zkscan7E9PVW1 718 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Prl3d1P18121 224 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 FtoQ8BGW1 502 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Champ1Q8K327 802 aaKnown RBP20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Gdpd2Q9ESM6 539 aa20.51■□□□□ 0.87
Sort1-203ENSMUST00000135636 Gdap1O88741 358 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Cacnb3P54285 484 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Dnajc25A2ALW5 357 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Tnnc2P20801 160 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Ciapin1Q8WTY4 309 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Syndig1A2ANU3 258 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Hmgb1P63158 215 aaKnown RBP20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Ifit1Q64282 463 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Pja2Q80U04 707 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Efhd1Q9D4J1 240 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 DgkiD3YWQ0 1071 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Magea6O89010 325 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 SsbP32067 415 aaKnown RBP20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 RgmbQ7TQ33 436 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Rsad2Q8CBB9 362 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Brd3Q8K2F0 726 aaKnown RBP20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Nod2Q8K3Z0 1020 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 BrapQ99MP8 591 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Acnat1A2AKK5 416 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Tmod1P49813 359 aa20.5■□□□□ 0.87
Sort1-203ENSMUST00000135636 Trim68Q8K243 485 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms