RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Arrdc4A0A0B4J1F4 415 aa35.84■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Sept2P42208 361 aaKnown RBP35.84■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Frmpd4A2AFR3 1320 aa35.84■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Zmym2Q9CU65 1376 aa35.84■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 WaplQ65Z40 1200 aaKnown RBP35.83■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Tmc1Q8R4P5 757 aa35.83■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Exosc10P56960 887 aaKnown RBP35.83■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Prdm1Q60636 856 aa35.83■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Pxylp1Q8BHA9 480 aa35.83■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Fsd2Q8BZ52 692 aa35.83■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Cog5Q8C0L8 829 aa35.83■■■■□ 3.33
Ctdnep1-201ENSMUST00000108593 Nmt2O70311 529 aa35.82■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Gprin1Q3UNH4 932 aa35.82■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 DlatQ8BMF4 642 aa35.82■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 HunkO88866 714 aa35.81■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Sh2d1b2Q45HK4 132 aa35.81■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Cep55Q8BT07 462 aa35.81■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Mtmr4Q91XS1 1190 aa35.81■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Tomm22Q9CPQ3 142 aa35.81■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Has3O08650 554 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Sema3fO88632 785 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Serpinb2P12388 415 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Ptpn12P35831 775 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Rasa3Q60790 834 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Rps6kb1Q8BSK8 525 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Slc4a7Q8BTY2 1034 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Il31raQ8K5B1 716 aa35.8■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Anp32aO35381 247 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Gjb2Q00977 226 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Pip5kl1Q6U7H8 395 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Tacc1Q6Y685 774 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Gpr108Q91WD0 569 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Atp8b3Q6UQ17 1335 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Gm10093D3YYI8 482 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Hdac1O09106 482 aaKnown RBP35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Sv2cQ69ZS6 727 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Ncaph2Q8BSP2 607 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Lca5lQ8C0X0 741 aa35.79■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 PtpraP18052 829 aa35.78■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Ints3Q7TPD0 1041 aaKnown RBP35.78■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Calhm4Q8CE93 315 aa35.78■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Ero1bQ8R2E9 467 aa35.78■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 LlphQ9D945 130 aaKnown RBP35.78■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Q9D9S1 216 aa35.78■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Pde6aP27664 859 aa35.77■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 VegfbP49766 207 aa35.77■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Tti2Q8BGV4 512 aa35.77■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 EngaseQ8BX80 734 aa35.77■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Terb1Q8C0V1 768 aa35.77■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Pus7lQ8CE46 702 aa35.77■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Tceanc2Q8R2M0 207 aa35.77■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Glra4Q61603 456 aa35.76■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Paf1Q8K2T8 535 aa35.76■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 Slx4ipQ9D7Y9 413 aa35.76■■■■□ 3.32
Ctdnep1-201ENSMUST00000108593 SynrgQ5SV85 1306 aa35.76■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Cfap99A0A140LIX9 648 aa35.75■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Scfd1Q8BRF7 639 aaKnown RBP35.75■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Ttll1Q91V51 423 aa35.75■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Prr16A3KMN5 304 aa35.75■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Sec23aQ01405 765 aa35.75■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Hps6Q8BLY7 805 aa35.75■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Trmt112Q9DCG9 125 aa35.75■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Mtx1P47802 317 aa35.74■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Zbtb39Q6PDK0 712 aa35.74■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Cnksr2Q80YA9 1032 aa35.74■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Trnp1Q80ZI1 223 aa35.74■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Myl10Q62082 202 aa35.73■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 AnlnQ8K298 1121 aaKnown RBP35.73■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Phactr2B1AVP0 632 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Prr7Q3V0I2 269 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Pes1Q9EQ61 584 aaKnown RBP35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Gm44503E9PYU5 387 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 ThbdP15306 577 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 TbcaP48428 108 aaKnown RBP35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Otud5Q3U2S4 566 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Dnaaf4Q8R368 420 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Rfc4Q99J62 364 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Eid1Q9DCR4 169 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 WtapQ9ER69 396 aa35.72■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Alppl2P24823 529 aa35.71■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Pou3f3P31361 497 aa35.71■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 OsbpQ3B7Z2 805 aa35.71■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Tfcp2l1Q3UNW5 479 aa35.71■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Col11a1Q61245 1804 aa35.71■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Usp5P56399 858 aaKnown RBP35.7■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Zfp341Q6PGC9 846 aa35.7■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 Nop2Q922K7 793 aaKnown RBP35.7■■■■□ 3.31
Ctdnep1-201ENSMUST00000108593 A430078G23RikE9Q7Y4 484 aa35.69■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Cbx2P30658 519 aa35.69■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Atoh1P48985 351 aa35.69■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Scg2Q03517 617 aa35.69■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Arl14Q3SXC5 192 aa35.69■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Arhgef6Q8K4I3 771 aa35.69■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Tmem47Q9JJG6 181 aa35.69■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Rabep1O35551 862 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 LrmpQ60664 539 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Usp50Q6P8X6 390 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Prkab1Q9R078 270 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Armc3A2AU72 881 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Fgfr2P21803 821 aa35.68■■■■□ 3.3
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms