RNA–Protein interactions for RNA: ENSMUST00000063249.8

Xrcc1-201, Transcript of DNA repair protein XRCC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1-201ENSMUST00000063249 Zmym2Q9CU65 1376 aa17.3■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Has3O08650 554 aa17.3■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Usp53P15975 1069 aa17.3■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 OsbpQ3B7Z2 805 aa17.3■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Scfd2Q8BTY8 684 aa17.3■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Calhm4Q8CE93 315 aa17.3■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Akap8Q9DBR0 687 aaKnown RBP17.3■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Znf638Q61464 1960 aaKnown RBP17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Cyp2d34L7N463 504 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Sema3fO88632 785 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Pou3f3P31361 497 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Anapc15P60007 132 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Cnksr2Q80YA9 1032 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Il31raQ8K5B1 716 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 SmapQ9R0P4 181 aaKnown RBP17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Clip2Q9Z0H8 1047 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Zkscan16A2ALW2 728 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Fbxl16A2RT62 479 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 PtpraP18052 829 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Ptpn12P35831 775 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Tekt3Q6X6Z7 490 aa17.29■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Zscan18E9PUD6 809 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Gm29094F6Q785 221 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Nmt2O70311 529 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Prdm1Q60636 856 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Ero1bQ8R2E9 467 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Odf2lQ9D478 642 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 SynrgQ5SV85 1306 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 WaplQ65Z40 1200 aaKnown RBP17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Sv2cQ69ZS6 727 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Trnp1Q80ZI1 223 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Sp8Q8BMJ8 486 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Tomm22Q9CPQ3 142 aa17.28■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Atp8b3Q6UQ17 1335 aa17.27■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Otud5Q3U2S4 566 aa17.27■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Mtmr4Q91XS1 1190 aa17.27■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Cdca7lQ922M5 438 aa17.27■□□□□ 0.36
Xrcc1-201ENSMUST00000063249 Cfap99A0A140LIX9 648 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Nolc1E9Q5C9 702 aaKnown RBP17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Gm21985Q6P6P5 1106 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 DlatQ8BMF4 642 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 ThbdP15306 577 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Cbx2P30658 519 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Tfcp2l1Q3UNW5 479 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Glra4Q61603 456 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Zbtb39Q6PDK0 712 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Pip5kl1Q6U7H8 395 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Tacc1Q6Y685 774 aa17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Psma5Q9Z2U1 241 aaKnown RBP17.26■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Zmynd8A2A484 1235 aaKnown RBP17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Atoh1P48985 351 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Exosc10P56960 887 aaKnown RBP17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Prr7Q3V0I2 269 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Fsd2Q8BZ52 692 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Armc3A2AU72 881 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Gm44503E9PYU5 387 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Oog1E9Q5G7 496 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Pde6aP27664 859 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Arl14Q3SXC5 192 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Spryd7Q3TFQ1 196 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Zfp341Q6PGC9 846 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Dnaaf4Q8R368 420 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Rfc4Q99J62 364 aa17.25■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Gm38655A0A286YDK6 273 aa17.24■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Mrps27Q8BK72 415 aaKnown RBP17.24■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Scfd1Q8BRF7 639 aaKnown RBP17.24■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Terb1Q8C0V1 768 aa17.24■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Pus7lQ8CE46 702 aa17.24■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Ttll1Q91V51 423 aa17.24■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 A430078G23RikE9Q7Y4 484 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Usp17ldG5E8G2 545 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Usp17lcG5E8I7 545 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Traf5P70191 558 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Rps6kb1Q8BSK8 525 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Cep55Q8BT07 462 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Vmn1r199Q8R280 367 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Tceanc2Q8R2M0 207 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Trmt112Q9DCG9 125 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Eid1Q9DCR4 169 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Fgfr2P21803 821 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Gjb2Q00977 226 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Sec23aQ01405 765 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Eme2Q56A04 373 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Myl10Q62082 202 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Liat1Q810M6 228 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Ncaph2Q8BSP2 607 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Gpr108Q91WD0 569 aa17.23■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Prr16A3KMN5 304 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Alppl2P24823 529 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 LtbrP50284 415 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Usp50Q6P8X6 390 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Tti2Q8BGV4 512 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Hps6Q8BLY7 805 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Prkab1Q9R078 270 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Brca1P48754 1812 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Gm42688A0A0R3P9D1 673 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Mms22lB1AUR6 1238 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Dcaf15Q6PFH3 600 aa17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Ints3Q7TPD0 1041 aaKnown RBP17.22■□□□□ 0.35
Xrcc1-201ENSMUST00000063249 Ccdc142Q8CAI1 738 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms