RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Haus6Q6NV99 933 aaKnown RBP13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Hook2Q7TMK6 716 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Mkrn1Q9QXP6 481 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Snapc4Q8BP86 1333 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Pard3Q99NH2 1333 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Pde8bE9Q4S1 865 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 KaznQ69ZS8 779 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Lin9Q8C735 542 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tmem132aQ922P8 1018 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Lamc1P02468 1607 aaKnown RBP13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Mybl2P48972 704 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Jdp2P97875 163 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Znf667Q2TL60 609 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Oxsr1Q6P9R2 527 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Dnm3Q8BZ98 863 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Galnt15Q9D2N8 638 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Apol7aB2RT54 418 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 DgkiD3YWQ0 1071 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Atp6v1aP50516 617 aaKnown RBP13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ankrd13cQ3UX43 541 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 HelbQ6NVF4 1074 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Rassf2Q8BMS9 326 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Hdac6Q9Z2V5 1149 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cul7Q8VE73 1689 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Gm4758L7N258 96 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Sap30bpQ02614 308 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Gngt1Q61012 74 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Acbd3Q8BMP6 525 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ccdc14Q8K2J4 934 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 ChmQ9QXG2 665 aa13.92□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ak9G3UYQ4 1894 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Fhod3Q76LL6 1578 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Rps8P62242 208 aaKnown RBP13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Iqsec3Q3TES0 1195 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Kcnn1Q9EQR3 537 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Spa17Q62252 149 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cap2Q9CYT6 476 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Akap8Q9DBR0 687 aaKnown RBP13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Trpm2Q91YD4 1506 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Eif2ak4Q9QZ05 1648 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tbc1d31Q6NXY1 996 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Lrsam1Q80ZI6 727 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Mcur1Q9CXD6 340 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Plekhg1F6S200 1446 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 SpopQ6ZWS8 374 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Asic2Q925H0 512 aa13.91□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Parp1P11103 1013 aaKnown RBP13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Rad23aP54726 363 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ccdc114Q3UX62 658 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Msl1Q6PDM1 616 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cyp2d12Q8BVD2 504 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Paip2Q9D6V8 124 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ifi35Q9D8C4 286 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tmco5aQ9D9D5 303 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Acap3Q6NXL5 833 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cbx6Q9DBY5 414 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ubn2Q80WC1 1314 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Gm38392E9Q2A2 434 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Nf2P46662 596 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Armc2Q3URY6 854 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ift20Q61025 132 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ankk1Q8BZ25 745 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ifih1Q8R5F7 1025 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ddx41Q91VN6 622 aaKnown RBP13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Klhl40Q9D783 621 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Efcc1Q9JJF6 558 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Zbtb7aO88939 569 aaKnown RBP13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Gbp1Q01514 589 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ripply1Q2WG77 201 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ccdc189Q6NZQ0 333 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tas2r124Q7M718 309 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Bbs9Q811G0 885 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 GlmnQ8BZM1 596 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Emilin1Q99K41 1017 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Lrp2bpQ9D4C6 346 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Mtmr7Q9Z2C9 660 aa13.9□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Sos2Q02384 1333 aa13.9□□□□□ -0.19
Sdf4-201ENSMUST00000050078 A0A1Y7VML8 143 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Gm2030D3Z7C4 212 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Fam228bQ497Q6 232 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Krt77Q6IFZ6 572 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 SncbQ91ZZ3 133 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Mxra7Q9CZH7 178 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Unc13aQ4KUS2 1712 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Psmc2P46471 433 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Drc1Q3USS3 753 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Nsrp1Q5NCR9 542 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Mei4Q8BRM6 389 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 StambpQ9CQ26 424 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Ube3bQ9ES34 1070 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Tmod2Q9JKK7 351 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Yeats2Q3TUF7 1407 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Map7d1A2AJI0 846 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Ccdc6D3YZP9 469 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Kif5cP28738 956 aaKnown RBP13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Senp1P59110 640 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Psmd1Q3TXS7 953 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Hirip3Q8BLH7 601 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 FliiQ9JJ28 1271 aa13.89□□□□□ -0.19
Sdf4-201ENSMUST00000050078 Azi2Q9QYP6 405 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms