RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Trim55G3X8Y1 545 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Api5O35841 504 aaKnown RBP11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Anks1bQ8BIZ1 1259 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Pcdha12Q91Y18 950 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Trim34aQ99PP6 485 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ppil4Q9CXG3 492 aaKnown RBP11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Rims2Q9EQZ7 1530 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Pde8bE9Q4S1 865 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Tmem143Q8VD26 458 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Mfap3Q922T2 349 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cnpy3Q9DAU1 276 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ehd4Q9EQP2 541 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Myo1cQ9WTI7 1063 aa11.68□□□□□ -0.54
Trim17-201ENSMUST00000047697 Gm5580A0A0N4SVP8 411 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Zbtb7aO88939 569 aaKnown RBP11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Prl7d1P04769 244 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 MarcksP26645 309 aaKnown RBP11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Stim1P70302 685 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Sycp1Q62209 993 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Zrsr2Q62377 462 aaKnown RBP11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 SetQ9EQU5 289 aaKnown RBP11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Rapgef4Q9EQZ6 1011 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Acad12D3Z7X0 555 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Zfpm1O35615 995 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Vsnl1P62761 191 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Kcna6Q61923 529 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ctnna3Q65CL1 895 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cfap69Q8BH53 942 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Mfap3lQ9D3X9 409 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 PtprvP70289 1705 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 A0A1Y7VML8 143 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Pak1O88643 545 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cct5P80316 541 aaKnown RBP11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ric8aQ3TIR3 530 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Mrps31Q61733 384 aaKnown RBP11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cyp4x1Q6A152 507 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Sval3Q76I99 144 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Alx1Q8C8B0 326 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Krt222Q8CCX5 294 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Tspyl4Q8VD63 406 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ssfa2Q922B9 1252 aa11.67□□□□□ -0.54
Trim17-201ENSMUST00000047697 Prr16A3KMN5 304 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Casp1P29452 402 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Gpt2Q8BGT5 522 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cep85Q8BMK0 761 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 NelfbQ8C4Y3 580 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Card14Q99KF0 999 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Mis18aQ9CZJ6 204 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Fam217aQ9D9W6 419 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Akr1c19G3X9Y6 323 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 PpardP35396 440 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Traf1P39428 409 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Bbof1Q3V079 533 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Slc44a1Q6X893 653 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Hps6Q8BLY7 805 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Iqcb1Q8BP00 598 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Vps53Q8CCB4 832 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Gm28042B7ZCM9 1014 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Krt86P97861 486 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Slf2Q6P9P0 1278 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Glis3Q6XP49 780 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Lrrc59Q922Q8 307 aaKnown RBP11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Dpf1Q9QX66 387 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Mroh6V9GX81 722 aa11.66□□□□□ -0.54
Trim17-201ENSMUST00000047697 Setdb1O88974 1307 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Chd2E9PZM4 1827 aaKnown RBP11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Krt24A1L317 512 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Prr29B1ARI9 187 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Dnajc21E9Q8D0 531 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Eif3j1Q3UGC7 261 aaKnown RBP11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cyp24a1Q64441 514 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Eif3j2Q66JS6 263 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Otop3Q80UF9 577 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Olfm5Q8BU90 496 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Slc13a4Q8BZ82 625 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Sox30Q8CGW4 782 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ints5Q8CHT3 1018 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Hexim1Q8R409 356 aaKnown RBP11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Srgap2Q91Z67 1071 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ppp2r3dQ9Z176 491 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Robo1O89026 1612 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Casz1Q9CWL2 1761 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cyp19a1P28649 503 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Nap1l1P28656 391 aaKnown RBP11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 LtbrP50284 415 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Cdr2P97817 455 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Olfr119Q7TRJ5 321 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Ccdc14Q8K2J4 934 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Rrp1bQ91YK2 724 aaKnown RBP11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Sel1lQ9Z2G6 790 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Scn7aB1AYL1 1681 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Pard3Q99NH2 1333 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Rsrc2A2RTL5 376 aaKnown RBP11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Atp8b5A3FIN4 1183 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Rfc1P35601 1131 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Sept1P42209 366 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Lrriq3Q14DL3 633 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Dact1Q8R4A3 778 aa11.65□□□□□ -0.54
Trim17-201ENSMUST00000047697 Tas2r124Q7M718 309 aa11.64□□□□□ -0.55
Trim17-201ENSMUST00000047697 Prpf40bQ80W14 870 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms