RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Dph5Q9CWQ0 281 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Bfsp1A2AMT1 669 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Lekr1B2RVN1 116 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Cdr1E9Q0B4 517 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Atp6v1aP50516 617 aaKnown RBP10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 4930504O13RikQ8C5Z9 145 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Bag2Q91YN9 210 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Pde1bQ01065 535 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Msl1Q6PDM1 616 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Hgh1Q8C3I8 393 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Apol10aQ8CCA5 318 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Apbb1ipQ8R5A3 670 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Armc3A2AU72 881 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Gna15P30678 374 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Mcm5P49718 733 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Samsn1P57725 372 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Clic6Q8BHB9 596 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Arhgap24Q8C4V1 747 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Vps52Q8C754 723 aaKnown RBP10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 4921530L21RikQ9CQ47 274 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Thap12Q9CUX1 758 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Nckap5lQ6GQX2 1323 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Tbc1d4Q8BYJ6 1307 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Cnksr1A2A9K7 700 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Atp8a2P98200 1148 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Bicdl2Q8CHW5 507 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Tnpo2Q99LG2 887 aaKnown RBP10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Pdzd9Q9D9M4 266 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 Trpc3Q9QZC1 836 aa10.9□□□□□ -0.66
Syne1-201ENSMUST00000041639 AW822073A0A0N4SUK1 652 aa10.9□□□□□ -0.67
Syne1-201ENSMUST00000041639 Parp2O88554 559 aa10.9□□□□□ -0.67
Syne1-201ENSMUST00000041639 Psmc2P46471 433 aa10.9□□□□□ -0.67
Syne1-201ENSMUST00000041639 Eif4a1P60843 406 aaKnown RBP10.9□□□□□ -0.67
Syne1-201ENSMUST00000041639 Slc7a6osQ7TPE5 306 aa10.9□□□□□ -0.67
Syne1-201ENSMUST00000041639 Spc24Q9D083 201 aa10.9□□□□□ -0.67
Syne1-201ENSMUST00000041639 PrphP15331 475 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Csrnp1P59054 583 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Zbtb16Q3UQ17 673 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pabpn1lQ5XFR0 273 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Trim21Q62191 470 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Fgd5Q80UZ0 1219 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Spata2Q8K004 515 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Golga1Q9CW79 758 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nsun2Q1HFZ0 757 aaKnown RBP10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Slc38a10Q5I012 1090 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Psma7Q9Z2U0 248 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ccdc13D3YV10 709 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ppp2r5bQ6PD28 497 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ppp2r2cQ8BG02 447 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Scyl2Q8CFE4 930 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Kcnk13Q8R1P5 405 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Lrrc74aA0A1Y7VMD6 494 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Cpb1B2RS76 415 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Slc51bQ80WK2 128 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pde6cQ91ZQ1 861 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Prl3d1P18121 224 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Etf1Q8BWY3 437 aaKnown RBP10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Filip1Q9CS72 1211 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Kdm3bQ6ZPY7 1562 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Talpid3E9PV87 1520 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Tlr7P58681 1050 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Znf667Q2TL60 609 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Spats2Q8K1N4 545 aaKnown RBP10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Emilin2Q8K482 1074 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Rbm43Q99J64 343 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Syap1Q9D5V6 365 aa10.89□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nedd9O35177 833 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Becn2P0DM65 447 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Trip13Q3UA06 432 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Birc2Q62210 612 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nrbp1Q99J45 535 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pdzd4Q9QY39 772 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ighmbp2P40694 993 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Camsap3Q80VC9 1252 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Eif2aQ8BJW6 581 aaKnown RBP10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Znf76Q8BMU0 568 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ginm1Q91WR6 327 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Cd2bp2Q9CWK3 342 aaKnown RBP10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Speer3W4VSP1 261 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Arhgef40Q3UPH7 1517 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pus7B7ZNL8 666 aaKnown RBP10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 1700029H14RikE9PY36 240 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Sclt1G5E861 688 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Cnnm4Q69ZF7 771 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gpcpd1Q8C0L9 675 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Tex14Q7M6U3 1450 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ftl2P49945 183 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Armcx3Q8BHS6 379 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Krt222Q8CCX5 294 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ankrd49Q8VE42 238 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pcdha7Q91Y13 937 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Sh2d4bA6X942 431 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Taf4E9QAP7 1042 aaKnown RBP10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ncf2O70145 525 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Armc2Q3URY6 854 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ovgp1Q62010 721 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Rab34Q64008 259 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Stk38lQ7TSE6 464 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 MesdQ9ERE7 224 aa10.88□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ercc5P35689 1170 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 108.9 ms