RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Apol7aB2RT54 418 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Fam186bD3Z420 943 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ighmbp2P40694 993 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccdc186Q8C9S4 917 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Lrrc1Q80VQ1 524 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ces1dQ8VCT4 565 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Stk39Q9Z1W9 556 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tmem131lQ3U3D7 1597 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cdk12Q14AX6 1484 aaKnown RBP12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 DgkiD3YWQ0 1071 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cyp3a57D3YYZ0 503 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Gm10378F6XQQ1 160 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Traf1P39428 409 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tsnaxip1Q99P25 704 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Sos2Q02384 1333 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Sec24cG3X972 1096 aaKnown RBP12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Acbd5Q5XG73 508 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Atg9aQ68FE2 551 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Nek5Q7TSC3 627 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ublcp1Q8BGR9 318 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Farp2Q91VS8 1065 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Mfap3Q922T2 349 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Etnk1Q9D4V0 363 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Irx5Q9JKQ4 484 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Fndc1E9Q043 1732 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Col15a1O35206 1367 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 A0A1Y7VML8 143 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 CltaO08585 235 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccng2O08918 344 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pla2g4aP47713 748 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Plcb3P51432 1234 aaKnown RBP12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Erlin2Q8BFZ9 340 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccdc43Q9CR29 222 aaKnown RBP12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ribc1Q9D0B8 379 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Mfap3lQ9D3X9 409 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 EhhadhQ9DBM2 718 aa12.72□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ehbp1l1Q99MS7 1716 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Speer4aF8VPX6 267 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 NpcdF8VQB8 469 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pip4k2aO70172 405 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ssrp1Q08943 708 aaKnown RBP12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccnl1Q52KE7 532 aaKnown RBP12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cyp7b1Q60991 507 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Asic1Q6NXK8 526 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cplx4Q80WM3 160 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Washc1Q8VDD8 475 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Osbpl1aQ91XL9 950 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Rrp1bQ91YK2 724 aaKnown RBP12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ubxn1Q922Y1 297 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Abca9Q8K449 1623 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Bicdl1A0JNT9 577 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Prr16A3KMN5 304 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cops6O88545 324 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Rnf41Q8BH75 317 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pdia6Q922R8 440 aaKnown RBP12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Sept14Q9DA97 430 aa12.71□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Zfp853A0A1D5RM95 733 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Epb41l2O70318 988 aaKnown RBP12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Casp1P29452 402 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cep63Q3UPP8 700 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tmem232Q5K6N0 675 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Fermt3Q8K1B8 665 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tmem143Q8VD26 458 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Copb1Q9JIF7 953 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Trp53inp1Q9QXE4 239 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Flt4P35917 1363 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 VimP20152 466 aaKnown RBP12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Prpf40bQ80W14 870 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 D130040H23RikQ8BII3 405 aa12.71□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Zbtb38Q3LR78 1197 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Carmil2Q3V3V9 1296 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Mcm7Q61881 719 aaKnown RBP12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Trim6Q8BGE7 488 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Arhgap4B1AUY3 965 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cnnm2Q3TWN3 875 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ufl1Q8CCJ3 793 aaKnown RBP12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Prl7d1P04769 244 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ccdc174Q3U155 467 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Sval3Q76I99 144 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Anks1bQ8BIZ1 1259 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Vps53Q8CCB4 832 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Trim34aQ99PP6 485 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tnip1Q9WUU8 647 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Gm28919A0A087WP35 240 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Art2aP17981 287 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ell2Q3UKU1 639 aa12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Knop1Q9Z2Q2 478 aaKnown RBP12.7□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Foxp1P58462 705 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Gemin5Q8BX17 1502 aaKnown RBP12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ebag9Q9D0V7 213 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 CpvlQ9D3S9 478 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Zbtb7aO88939 569 aaKnown RBP12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tubb5P99024 444 aaKnown RBP12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Dnph1Q80VJ3 173 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Asnsd1Q8BFS9 627 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Iqcb1Q8BP00 598 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Paf1Q8K2T8 535 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Six6os1Q9CTN5 574 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Gm5934D3Z4U6 212 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cyp4x1Q6A152 507 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms