RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Vps41Q5KU39 853 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Dhx40Q6PE54 779 aaKnown RBP11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Cdc23Q8BGZ4 597 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Tmem87bQ8BKU8 555 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Apol10aQ8CCA5 318 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Krt222Q8CCX5 294 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Bmp2kQ91Z96 1138 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gkap1Q9JMB0 366 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Vstm4T1NXB5 319 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ampd3O08739 766 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Cyp26a1O55127 497 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Dpf2Q61103 391 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Brd2Q7JJ13 798 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Tsen34Q8BMZ5 316 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Wasf1Q8R5H6 559 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Sar1bQ9CQC9 198 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 March10E9PX79 788 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ankrd35E9Q9D8 996 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Speer4aF8VPX6 267 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Hspd1P63038 573 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Kiaa1524Q8BWY9 907 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ddx54Q8K4L0 874 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Wnk3Q80XP9 1757 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Tcof1O08784 1320 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Trip13Q3UA06 432 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Trim6Q8BGE7 488 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Cyp2d12Q8BVD2 504 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Acsl3Q9CZW4 720 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 SarnpQ9D1J3 210 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Paip2Q9D6V8 124 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Smco2Q9DA21 347 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Krt71Q9R0H5 524 aa11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Uso1Q9Z1Z0 959 aaKnown RBP11.97□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ube3aO08759 870 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Casp1P29452 402 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gna15P30678 374 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Slc5a1Q8C3K6 665 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Proser2Q8C5R2 471 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Abcf2Q99LE6 628 aaKnown RBP11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 MbipQ99LQ1 341 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Aox4Q3TYQ9 1336 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 TrdnE9Q9K5 693 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Haus1Q8BHX1 278 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Arpp21Q9DCB4 807 aa11.96□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Slit2Q9R1B9 1521 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ptpn23Q6PB44 1692 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Mdh1P14152 334 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Aimp1P31230 310 aaKnown RBP11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Anks1aP59672 1150 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Bend3Q6PAL0 825 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Dzip1Q8BMD2 852 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tada3Q8R0L9 432 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Flad1Q8R123 492 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cgref1Q8R1U2 281 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Atp1a1Q8VDN2 1023 aaKnown RBP11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Fam133bQ9CVI2 245 aaKnown RBP11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ribc1Q9D0B8 379 aa11.96□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Clcn6O35454 870 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Serpinb1cQ5SV42 375 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cyp7a1Q64505 503 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 D130040H23RikQ8BII3 405 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ulbp1Q8HWA3 334 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Nol7Q9D7Z3 254 aaKnown RBP11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 PigbQ9JJQ0 542 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ltbp4Q8K4G1 1666 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm5580A0A0N4SVP8 411 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Zfp174B9EJW5 407 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 NpcdF8VQB8 469 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pip4k2aO70172 405 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ms4a1P19437 291 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pla2g4aP47713 748 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Kifap3P70188 793 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Foxd4Q60688 444 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pde5aQ8CG03 865 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Slc4a8Q8JZR6 1089 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 HdlbpQ8VDJ3 1268 aaKnown RBP11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ncoa5Q91W39 579 aaKnown RBP11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gucy1a3Q9ERL9 691 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pramel3A2AHA7 463 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm7903A2AWL1 463 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 AV320801A2AWL3 467 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm15023L7MUB4 467 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cacna2d1O08532 1103 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cdk4P30285 303 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Ccdc114Q3UX62 658 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Mettl5Q8K1A0 209 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Brms1Q99N20 246 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 4930519G04RikQ9CPT7 205 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Luc7lQ9CYI4 371 aaKnown RBP11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Fam217aQ9D9W6 419 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Cwc25Q9DBF7 416 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Trp53inp1Q9QXE4 239 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Stk36Q69ZM6 1316 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 PtprvP70289 1705 aa11.95□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Tbc1d8bA3KGB4 1114 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Hap1O35668 628 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Bank1Q80VH0 783 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 CpvlQ9D3S9 478 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Nfat5Q9WV30 1534 aa11.94□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Trim34bJ3QNR8 485 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms