RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Wdr3Q8BHB4 942 aaKnown RBP20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Spata32Q8C5V0 334 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Sh3bp5lQ99LH9 392 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Hip1rQ9JKY5 1068 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Zscan20B2KFW1 1030 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 EmbP21995 330 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Gnat2P50149 354 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Gng11P61953 73 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 IntuQ059U7 942 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Trak2Q6P9N8 913 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Rbm28Q8CGC6 750 aaKnown RBP20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Brd3Q8K2F0 726 aaKnown RBP20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Nod2Q8K3Z0 1020 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Thap2Q9D305 217 aa20.98■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Prr16A3KMN5 304 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Mapkapk5O54992 473 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Tdo2P48776 406 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Sh3bp1P55194 680 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Mcm6P97311 821 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Kmt5bQ3U8K7 883 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Sun3Q5SS91 320 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Gm36210A0A1B0GS00 229 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Pet2A2AHY8 747 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Usp50Q6P8X6 390 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Lonrf3Q9D4H7 753 aa20.97■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Golgb1E9PVZ8 3238 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Gabpb2P81069 414 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 1700013D24RikQ0P521 120 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Spag5Q7TME2 1165 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Caps2Q8BUG5 550 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Foxo3Q9WVH4 672 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Cul4bA2A432 970 aaKnown RBP20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 NefhP19246 1090 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Cd209bQ8CJ91 325 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 NgdnQ9DB96 315 aaKnown RBP20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 Irs4Q9Z0Y7 1216 aa20.96■□□□□ 0.95
Ccdc3-201ENSMUST00000027988 TbcaP48428 108 aaKnown RBP20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Psmb7P70195 277 aa20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Txndc5Q91W90 417 aa20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ankrd63A2ARS0 390 aa20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 MycbpapQ5SUV2 932 aa20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ncoa7Q6DFV7 943 aa20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Rasal3Q8C2K5 1041 aa20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Stn1Q8K2X3 378 aa20.95■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Nab2Q61127 525 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Bsdc1Q80Y55 427 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Rnf41Q8BH75 317 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Mapk8ip1Q9WVI9 707 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Vstm4T1NXB5 319 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Gucy1a2F8VQK3 730 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Rhbdl3P58873 404 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Snai1Q02085 264 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ctr9Q62018 1173 aaKnown RBP20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 1700018B08RikQ9DA83 213 aa20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Nup98Q6PFD9 1816 aaKnown RBP20.94■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 IkbkbO88351 757 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Sox5P35710 763 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Kiaa1468Q148V7 1216 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Mrps31Q61733 384 aaKnown RBP20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Lrrc15Q80X72 579 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Anks1bQ8BIZ1 1259 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 HdlbpQ8VDJ3 1268 aaKnown RBP20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Zranb2Q9R020 330 aaKnown RBP20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Bicdl1A0JNT9 577 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 PnnO35691 725 aaKnown RBP20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Myo1aO88329 1043 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Fam83bQ0VBM2 1012 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Lamb3Q61087 1168 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Krt40Q6IFX3 439 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ankrd23Q812A3 306 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 ParvgQ9ERD8 331 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ecm29Q6PDI5 1840 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Myh4Q5SX39 1939 aa20.93■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 CltaO08585 235 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 SfswapQ3USH5 945 aaKnown RBP20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Mns1Q61884 491 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Vps53Q8CCB4 832 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Rbm19Q8R3C6 952 aaKnown RBP20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Lcmt1A0A0U1RNF2 332 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Celf1P28659 486 aaKnown RBP20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 MpndQ3TV65 487 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Dusp9Q7TNL7 452 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 RadxQ8C779 850 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Sgpp1Q9JI99 430 aa20.92■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Zc3h12cQ5DTV4 884 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Cdcp1Q5U462 833 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Tas2r124Q7M718 309 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Maats1Q8BRC6 783 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Cxcl11Q9JHH5 100 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Gja10Q9WUS4 505 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Myh13B1AR69 1938 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Myh15E9Q264 1925 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Stox1B2RQL2 990 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Pbx1P41778 430 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Plekha7Q3UIL6 1118 aaKnown RBP20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ift88Q61371 824 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Znf526Q8BI66 675 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 QarsQ8BML9 775 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Smc2Q8CG48 1191 aaKnown RBP20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Prpf3Q922U1 683 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms