RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Mphosph6Q9D1Q1 161 aa18.58■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Gm1993A6X8I0 212 aa18.58■□□□□ 0.56
Col17a1-201ENSMUST00000026045 SlxD3Z347 212 aa18.58■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Hs2st1Q8R3H7 356 aa18.58■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Atad3Q925I1 591 aa18.58■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Gpr161B2RPY5 545 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Eef2P58252 858 aaKnown RBP18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ppp1r1bQ60829 194 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Klhl7Q8BUL5 586 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Pck1Q9Z2V4 622 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 FancaQ9JL70 1439 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ift81O35594 676 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Dact3Q0PHV7 610 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Cage1Q5IR70 849 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Cacna2d4Q5RJF7 1116 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Dnajc8Q6NZB0 253 aaKnown RBP18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Atp8b1Q148W0 1251 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Jade3Q6IE82 823 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Rcn2Q8BP92 320 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ccdc175E9PVB3 822 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Prl3d2F6R3P9 224 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Creld2Q9CYA0 350 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Aox1O54754 1333 aa18.57■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Rabgap1A2AWA9 1064 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Gm9992B2RWK3 458 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 SsbP32067 415 aaKnown RBP18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Unc93aQ710D3 458 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Spata2Q8K004 515 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Znf335A2A5K6 1337 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Rad23aP54726 363 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 CgasQ8C6L5 507 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Tab2Q99K90 693 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Kif17Q99PW8 1038 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Kif24Q6NWW5 1356 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Synj2Q9D2G5 1434 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ncaph2Q8BSP2 607 aa18.56■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Lrriq3Q14DL3 633 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ccdc33Q3ULW6 985 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Csrnp2Q8BGQ2 534 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Kif2cQ922S8 721 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Cfap57Q9D180 1249 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Dnaaf1Q9D2H9 634 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Xab2Q9DCD2 855 aaKnown RBP18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 DesP31001 469 aaKnown RBP18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Dnaaf2Q8BPI1 814 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Myl6bQ8CI43 207 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Casp8O89110 480 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Fchsd1Q6PFY1 688 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Syce1Q9D495 329 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 MarcksP26645 309 aaKnown RBP18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Gnat2P50149 354 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Itga6Q61739 1091 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 2310002L09RikQ9D7L5 217 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 1700006A11RikB9EHI3 544 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Mroh2aD3Z750 1679 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ddx17Q501J6 650 aaKnown RBP18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 SdsQ8VBT2 327 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Pde3aQ9Z0X4 1141 aa18.55■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Mdh1P14152 334 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ddb1Q3U1J4 1140 aaKnown RBP18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 4930519G04RikQ9CPT7 205 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Klhl40Q9D783 621 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Mast3Q3U214 1321 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Terf1P70371 421 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 MycbpapQ5SUV2 932 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Myl10Q62082 202 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Dnm3Q8BZ98 863 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Zfp202Q8C879 641 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Cd209bQ8CJ91 325 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Col4a3bpQ9EQG9 624 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 TsksO54887 585 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 IqceQ6PCQ0 778 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Prpf40bQ80W14 870 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ccdc80Q8R2G6 949 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Cul5Q9D5V5 780 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 1700109H08RikQ9D9C0 210 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Snrpa1P57784 255 aaKnown RBP18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ints8Q80V86 995 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Daam1Q8BPM0 1077 aa18.54■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Srek1ip1Q4V9W2 153 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Irs4Q9Z0Y7 1216 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Anxa1P10107 346 aaKnown RBP18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Tmco5aQ9D9D5 303 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Pacsin2Q9WVE8 486 aaKnown RBP18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Cep170Q6A065 1588 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 HdxQ14B70 692 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Ptpn14Q62130 1189 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Usp8Q80U87 1080 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Spc24Q9D083 201 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Angptl3Q9R182 455 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Gm12185Q5NCB2 835 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Tsr1Q5SWD9 803 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Tekt3Q6X6Z7 490 aa18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Foxp4Q9DBY0 795 aaKnown RBP18.53■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Brpf3B2KF05 1204 aaKnown RBP18.52■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Gm28043E0CXC2 719 aa18.52■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Serpinb6eI7HJI3 429 aa18.52■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Mum1l1Q4VA55 681 aa18.52■□□□□ 0.56
Col17a1-201ENSMUST00000026045 PsdQ5DTT2 1024 aa18.52■□□□□ 0.56
Col17a1-201ENSMUST00000026045 Kctd16Q5DTY9 427 aa18.52■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms