RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Clic4Q9QYB1 253 aa12.27□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ppp2r3dQ9Z176 491 aa12.27□□□□□ -0.44
Msh3-201ENSMUST00000022220 Psmb7P70195 277 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sap30bpQ02614 308 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Slc38a10Q5I012 1090 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Zrsr2Q62377 462 aaKnown RBP12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 RragbQ6NTA4 374 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 HelbQ6NVF4 1074 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Cyp4f39Q8BGU0 532 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Brd3Q8K2F0 726 aaKnown RBP12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 TrdnE9Q9K5 693 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ccdc191J3QQ27 883 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Islr2Q5RKR3 745 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Map3k11Q80XI6 850 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Klhl30Q8C3F7 581 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 NktrP30415 1453 aa12.27□□□□□ -0.45
Msh3-201ENSMUST00000022220 Spata18Q0P557 537 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ctdnep1Q3TP92 244 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Zfp202Q8C879 641 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ano2Q8CFW1 1002 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Lbhd1A0A087WPA0 259 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 CoblQ5NBX1 1337 aaKnown RBP12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Commd10Q8JZY2 202 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Arl8aQ8VEH3 186 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 MycbpQ9EQS3 103 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Aox4Q3TYQ9 1336 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Lrriq3Q14DL3 633 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Znf667Q2TL60 609 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Necab1Q8BG18 352 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Yars2Q8BYL4 472 aaKnown RBP12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sept12Q9D451 317 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sorbs3Q9R1Z8 733 aa12.26□□□□□ -0.45
Msh3-201ENSMUST00000022220 Slit3Q9WVB4 1523 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Prkg1P0C605 671 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Il7P10168 154 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Anks1aP59672 1150 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Pramel6Q810Y9 485 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Q8CEZ4 452 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Mettl5Q8K1A0 209 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Kcnh3Q9WVJ0 1095 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Pde3aQ9Z0X4 1141 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Rps6ka4Q9Z2B9 773 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sema6bO54951 886 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Slurp2P0DP59 97 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 C87499Q3UX49 493 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Gm5592Q3V0A6 857 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 KhnynQ80U38 671 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Tsen34Q8BMZ5 316 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 AbraQ8BUZ1 375 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 McamQ8R2Y2 648 aaKnown RBP12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Gimap7Q8R379 293 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Gps2Q921N8 327 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Prc1Q99K43 603 aaKnown RBP12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Dpf1Q9QX66 387 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Foxo4Q9WVH3 505 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Vmn2r23E9PXI5 849 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Rsph10bE9PYQ0 876 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Mx1P09922 631 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 GnaqP21279 359 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Cacnb3P54285 484 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Gm28047Q3US59 414 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ncoa7Q6DFV7 943 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 Zc3h6Q8BYK8 1177 aa12.25□□□□□ -0.45
Msh3-201ENSMUST00000022220 MeiocA2AG06 965 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Cfap100Q80VN0 613 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Gpcpd1Q8C0L9 675 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Kiaa1024Q8K3V7 917 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Trpm1Q2TV84 1622 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Gjc1P28229 396 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Rufy1Q8BIJ7 712 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 AdpgkQ8VDL4 496 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Desi2Q9D291 194 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Pnpla7A2AJ88 1352 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Cyp2j7A0A140T8U1 504 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Calm1P0DP26 149 aaKnown RBP12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Calm2P0DP27 149 aaKnown RBP12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Calm3P0DP28 149 aaKnown RBP12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 CalrP14211 416 aaKnown RBP12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 EmbP21995 330 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Eya3P97480 510 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Sec62Q8BU14 398 aaKnown RBP12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Efcab8Q8C9R9 203 aa12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Golph3lQ8R088 285 aaKnown RBP12.24□□□□□ -0.45
Msh3-201ENSMUST00000022220 Fam196bQ6GQV1 535 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Asic1Q6NXK8 526 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Luc7l2Q7TNC4 392 aaKnown RBP12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ppm1eQ80TL0 749 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Zfp317Q8C0Q5 607 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Usp44Q8C2S0 711 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 1700017N19RikA0A087WPJ1 469 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Nmt2O70311 529 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Pde6aP27664 859 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Lrrc36Q3V0M2 755 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Olfr118Q7TRJ6 321 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Ccdc181Q80ZU5 509 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Tcp11l1Q8BTG3 509 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Slc39a11Q8BWY7 342 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 HibadhQ99L13 335 aaKnown RBP12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Magi2Q9WVQ1 1275 aa12.23□□□□□ -0.45
Msh3-201ENSMUST00000022220 Palm3A2TJV2 734 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms