RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Thap2Q9D305 217 aa12.94□□□□□ -0.34
Vps54-201ENSMUST00000006221 Lonp2Q9DBN5 852 aa12.94□□□□□ -0.34
Vps54-201ENSMUST00000006221 Zranb2Q9R020 330 aaKnown RBP12.94□□□□□ -0.34
Vps54-201ENSMUST00000006221 Sun3Q5SS91 320 aa12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 Drc7Q6V3W6 876 aa12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 Vstm4T1NXB5 319 aa12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 Znfx1Q8R151 1909 aaKnown RBP12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 Caps2Q8BUG5 550 aa12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 TbcaP48428 108 aaKnown RBP12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 Nab2Q61127 525 aa12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 Fam114a1Q9D281 569 aa12.93□□□□□ -0.34
Vps54-201ENSMUST00000006221 Cyp3a25O09158 503 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Ifit1bl2Q3U687 466 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Rcan1Q9JHG6 198 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Hip1rQ9JKY5 1068 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 NesQ6P5H2 1864 aaKnown RBP12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Pus7lQ8CE46 702 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Txndc5Q91W90 417 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Ltbp4Q8K4G1 1666 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Pet2A2AHY8 747 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 1700029H14RikE9PY36 240 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Sox5P35710 763 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Tdo2P48776 406 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Mrps31Q61733 384 aaKnown RBP12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Rbm15bQ6PHZ5 887 aaKnown RBP12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Olfr118Q7TRJ6 321 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Foxo3Q9WVH4 672 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 AfdnQ9QZQ1 1820 aaKnown RBP12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Cul4bA2A432 970 aaKnown RBP12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Prr16A3KMN5 304 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Myo1aO88329 1043 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 MlphQ91V27 590 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Lonrf3Q9D4H7 753 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 Fbxo3Q9DC63 480 aa12.92□□□□□ -0.34
Vps54-201ENSMUST00000006221 IkbkbO88351 757 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Gnat2P50149 354 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 1700013D24RikQ0P521 120 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Rtel1Q0VGM9 1203 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 MycbpapQ5SUV2 932 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Dusp9Q7TNL7 452 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Rasal3Q8C2K5 1041 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 IntuQ059U7 942 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Exoc5Q3TPX4 708 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Anks1bQ8BIZ1 1259 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Smc2Q8CG48 1191 aaKnown RBP12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Tcp11l2Q8K1H7 517 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Myh3P13541 1940 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Dhx8A2A4P0 1244 aaKnown RBP12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Mapkapk5O54992 473 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Stat5bP42232 786 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Usp50Q6P8X6 390 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Ercc6lQ8BHK9 1240 aa12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Ccdc12Q8R344 166 aaKnown RBP12.91□□□□□ -0.34
Vps54-201ENSMUST00000006221 Ift88Q61371 824 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Stac3Q8BZ71 360 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Tpm3-rs7D3Z2H9 248 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Gucy1a2F8VQK3 730 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Kiaa1468Q148V7 1216 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Rnf41Q8BH75 317 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Rbm19Q8R3C6 952 aaKnown RBP12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Ercc4Q9QZD4 917 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Lgr5Q9Z1P4 907 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Znf638Q61464 1960 aaKnown RBP12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Zfp597E9Q6S0 419 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Traf1P39428 409 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Cep128Q8BI22 1102 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Vps53Q8CCB4 832 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Stn1Q8K2X3 378 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Tubb4aQ9D6F9 444 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 SelenooQ9DBC0 667 aa12.9□□□□□ -0.34
Vps54-201ENSMUST00000006221 Ugt1a8D3Z748 530 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Ugt1a10E9PXN7 530 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Gucy2cQ3UWA6 1072 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Pcdha7Q91Y13 937 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Mis18aQ9CZJ6 204 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Cfap44E9Q5M6 1843 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Kcnj4P52189 445 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Sval3Q76I99 144 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Phf20l1Q8CCJ9 1013 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 NgdnQ9DB96 315 aaKnown RBP12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Sgpp1Q9JI99 430 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Eif2ak3Q9Z2B5 1114 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Ccdc191J3QQ27 883 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Kif2aP28740 705 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Tas2r124Q7M718 309 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Irs4Q9Z0Y7 1216 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Scgb2b18A0A087WPA9 112 aa12.89□□□□□ -0.35
Vps54-201ENSMUST00000006221 Ankrd63A2ARS0 390 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Rsrc2A2RTL5 376 aaKnown RBP12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Pola2P33611 600 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Pbx1P41778 430 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 SfswapQ3USH5 945 aaKnown RBP12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Hspa4Q61316 841 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Ctr9Q62018 1173 aaKnown RBP12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Atp1a2Q6PIE5 1020 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Lrrc15Q80X72 579 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Sh3bp5lQ99LH9 392 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Krtap5-3Q9D226 196 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Mapk8ip1Q9WVI9 707 aa12.88□□□□□ -0.35
Vps54-201ENSMUST00000006221 Gm36210A0A1B0GS00 229 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms