RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 NelfbQ8C4Y3 580 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Lman1Q9D0F3 517 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 EhhadhQ9DBM2 718 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Txnrd1Q9JMH6 613 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Pak1O88643 545 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 CalrP14211 416 aaKnown RBP14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 VimP20152 466 aaKnown RBP14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cdc37Q61081 379 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cplx4Q80WM3 160 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Col14a1Q80X19 1797 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Pkd2l2Q9JLG4 621 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Tet3Q8BG87 1668 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Nfil3O08750 462 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Recql4Q75NR7 1216 aaKnown RBP14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cdc23Q8BGZ4 597 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Efcab8Q8C9R9 203 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Tcp11l2Q8K1H7 517 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ccdc14Q8K2J4 934 aa14.33□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Lmtk3Q5XJV6 1424 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm1993A6X8I0 212 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 SlxD3Z347 212 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Usp5P56399 858 aaKnown RBP14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Itga6Q61739 1091 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cep131Q62036 1060 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Skor1Q8BX46 964 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Pcdha12Q91Y18 950 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Emilin1Q99K41 1017 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 MbipQ99LQ1 341 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Vstm4T1NXB5 319 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 InsrrQ9WTL4 1300 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ccdc24E9PUW8 296 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Letm1Q9Z2I0 738 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cdcp1Q5U462 833 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Tsg101Q61187 391 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ddx10Q80Y44 875 aaKnown RBP14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Jmjd4Q8BFT6 427 aa14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Nol7Q9D7Z3 254 aaKnown RBP14.32□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm5934D3Z4U6 212 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 DlatQ8BMF4 642 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Rab3il1Q8VDV3 383 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Dph6Q9CQ28 267 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Sar1bQ9CQC9 198 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ccdc105Q9D4K7 499 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Arpp21Q9DCB4 807 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Dpf1Q9QX66 387 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 GdaQ9R111 454 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Col15a1O35206 1367 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Setdb1O88974 1307 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Kdm3aQ6PCM1 1323 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Izumo3A6PWV3 263 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Skap2Q3UND0 358 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Kdm1aQ6ZQ88 853 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Spag7Q7TNE3 227 aaKnown RBP14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Naa15Q80UM3 865 aaKnown RBP14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Usp44Q8C2S0 711 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Paf1Q8K2T8 535 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Uba5Q8VE47 403 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm7347D3YYI9 267 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Pold4Q9CWP8 107 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cbx8Q9QXV1 362 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Prpf40aQ9R1C7 953 aaKnown RBP14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Sipa1l2Q80TE4 1722 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Simc1E9Q6E9 1354 aa14.31□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ankrd35E9Q9D8 996 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Tsga10Q6NY15 697 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Prpf40bQ80W14 870 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Myl6bQ8CI43 207 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cd274Q9EP73 290 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Myo1cQ9WTI7 1063 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Nfat5Q9WV30 1534 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Pramel3A2AHA7 463 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm7903A2AWL1 463 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 AV320801A2AWL3 467 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Apol7aB2RT54 418 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm15023L7MUB4 467 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ccdc25Q78PG9 208 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Caps2Q8BUG5 550 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ints4Q8CIM8 964 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Dnajc17Q91WT4 303 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 BaatQ91X34 420 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Nck2O55033 380 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ighmbp2P40694 993 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ccdc114Q3UX62 658 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Islr2Q5RKR3 745 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Krt222Q8CCX5 294 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Slc14a2Q8R4T9 930 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 EcsitQ9QZH6 435 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm28042B7ZCM9 1014 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Mapkapk5O54992 473 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Asap2Q7SIG6 958 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Lrsam1Q80ZI6 727 aa14.3□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Grin2dQ03391 1323 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Card10P58660 1021 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ddx49Q4FZF3 480 aaKnown RBP14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Srgap2Q91Z67 1071 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Klhl40Q9D783 621 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Fam217aQ9D9W6 419 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Mkrn1Q9QXP6 481 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Pcdhb9E9Q5G2 828 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Klhl7Q8BUL5 586 aa14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms