RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Akap4Q60662 849 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Mapk4Q6P5G0 583 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Angel2Q8K1C0 544 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Gpsm2Q8VDU0 679 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Mtmr4Q91XS1 1190 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Pitpnm2Q6ZPQ6 1335 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Naaladl2A0A0N4SUJ3 795 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Catsper2A2ARP9 588 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Qrich1Q3UA37 777 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 LrmpQ60664 539 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 WaplQ65Z40 1200 aaKnown RBP17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ccdc148Q6P5U8 527 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Usp50Q6P8X6 390 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ift74Q8BKE9 600 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Phf20Q8BLG0 1010 aaKnown RBP17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Epc2Q8C0I4 808 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 DymQ8CHY3 669 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ccdc47Q9D024 483 aaKnown RBP17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Rcan1Q9JHG6 198 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Tmod2Q9JKK7 351 aa17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 SmapQ9R0P4 181 aaKnown RBP17.22■□□□□ 0.35
Ercc1-201ENSMUST00000003645 FanccP50652 591 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Dnajc2P54103 621 aaKnown RBP17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Cep63Q3UPP8 700 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ckap2Q3V1H1 664 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Abhd15Q5F2F2 459 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Stxbp2Q64324 593 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Tacc1Q6Y685 774 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Tpcn2Q8BWC0 731 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 C8aQ8K182 587 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Inpp5bQ8K337 993 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Mad2l2Q9D752 211 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Tmem47Q9JJG6 181 aa17.21■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Eef2kO08796 724 aa17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 L1camP11627 1260 aa17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Sept2P42208 361 aaKnown RBP17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 TbcaP48428 108 aaKnown RBP17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Cct2P80314 535 aaKnown RBP17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Bola3Q8CEI1 110 aa17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Rufy2Q8R4C2 606 aa17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Nop2Q922K7 793 aaKnown RBP17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Trmt112Q9DCG9 125 aa17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Acot3Q9QYR7 432 aa17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Znf638Q61464 1960 aaKnown RBP17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Cacna1fQ9JIS7 1985 aa17.2■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Atp8b3Q6UQ17 1335 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Fam71e1A1L3C1 212 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Me1P06801 572 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Myl3P09542 204 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Alppl2P24823 529 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Tmtc2Q56A06 836 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Zbtb39Q6PDK0 712 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Fsd1Q7TPM6 496 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Nxf7Q80SZ6 620 aaKnown RBP17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Rbm28Q8CGC6 750 aaKnown RBP17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Trex1Q91XB0 314 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Il21rQ9JHX3 529 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Pcdh15Q99PJ1 1943 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Usp31E9Q6Y8 1344 aa17.19■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Palm3A2TJV2 734 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 A430078G23RikE9Q7Y4 484 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Metap2O08663 478 aaKnown RBP17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Stx8O88983 236 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Mmp20P57748 482 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Mex3cQ05A36 652 aaKnown RBP17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Zfp953Q3UPV7 304 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Glra4Q61603 456 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Ube2oQ6ZPJ3 1288 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Alg3Q8K2A8 438 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Ttll1Q91V51 423 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 PdgfdQ925I7 370 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Wdr19Q3UGF1 1341 aa17.18■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Casq1O09165 405 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Calm1P0DP26 149 aaKnown RBP17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Calm2P0DP27 149 aaKnown RBP17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Calm3P0DP28 149 aaKnown RBP17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Usp5P56399 858 aaKnown RBP17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Traf3ip1Q149C2 625 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Krt74Q6IFZ9 495 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Senp6Q6P7W0 1132 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Smarcc2Q6PDG5 1213 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Scfd1Q8BRF7 639 aaKnown RBP17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Scfd2Q8BTY8 684 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Tut1Q8R3F9 869 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Gripap1Q8VD04 806 aa17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Telo2Q9DC40 840 aaKnown RBP17.17■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Tll1Q62381 1013 aa17.16■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Ppp2r5bQ6PD28 497 aa17.16■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Spata21Q8BHW6 681 aa17.16■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Tsr2Q8C8T8 191 aa17.16■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Calhm4Q8CE93 315 aa17.16■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Gimap7Q8R379 293 aa17.16■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Myh14Q6URW6 2000 aa17.16■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Gm20425E9Q035 978 aaKnown RBP17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 SrprbP47758 269 aa17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Plcd3Q8K2J0 785 aa17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Iffo2Q8R2V2 512 aa17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Ces1hD3Z298 562 aa17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Gtpbp6Q3U6U5 514 aa17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Garem2Q6PAJ3 880 aa17.15■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms