RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Gm9507D3Z5T3 223 aa4.77□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Szt2A2A9C3 3431 aa4.77□□□□□ -1.65
Ptpre-204ENSMUST00000209979 NbeaQ9EPN1 2936 aa4.76□□□□□ -1.65
Ptpre-204ENSMUST00000209979 FlncQ8VHX6 2726 aaKnown RBP4.75□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Unc80Q8BLN6 3261 aa4.74□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Itpr2Q9Z329 2701 aa4.74□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Zfhx3Q61329 3726 aa4.74□□□□□ -1.65
Ptpre-204ENSMUST00000209979 FcgbpE9Q0B5 2583 aa4.74□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Wdfy3Q6VNB8 3508 aa4.74□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Tenm4Q3UHK6 2771 aa4.73□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Krtap28-10A0A1Y7VP58 119 aa4.73□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Celsr1O35161 3034 aa4.72□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Csmd2V9GX34 3611 aa4.72□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Dmxl2Q8BPN8 3032 aa4.72□□□□□ -1.65
Ptpre-204ENSMUST00000209979 Tex15F8VPN2 2785 aa4.71□□□□□ -1.66
Ptpre-204ENSMUST00000209979 FrylF8VQ05 3007 aa4.7□□□□□ -1.66
Ptpre-204ENSMUST00000209979 Krtap10-4Q08EG8 221 aa4.68□□□□□ -1.66
Ptpre-204ENSMUST00000209979 Wdfy4E9Q2M9 3149 aa4.68□□□□□ -1.66
Ptpre-204ENSMUST00000209979 Gm17416Q30KP4 66 aa4.67□□□□□ -1.66
Ptpre-204ENSMUST00000209979 4933428G20RikQ9D3X4 101 aa4.66□□□□□ -1.66
Ptpre-204ENSMUST00000209979 TgO08710 2766 aa4.65□□□□□ -1.67
Ptpre-204ENSMUST00000209979 BptfA2A654 3036 aaKnown RBP4.64□□□□□ -1.67
Ptpre-204ENSMUST00000209979 Krtap10-10A0A1W2P7T6 217 aa4.63□□□□□ -1.67
Ptpre-204ENSMUST00000209979 LystP97412 3788 aa4.62□□□□□ -1.67
Ptpre-204ENSMUST00000209979 SpenQ62504 3644 aaKnown RBP4.6□□□□□ -1.67
Ptpre-204ENSMUST00000209979 Lama1P19137 3084 aa4.59□□□□□ -1.67
Ptpre-204ENSMUST00000209979 Dchs2A0A0A6YW72 3346 aa4.59□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Srrm2Q8BTI8 2703 aaKnown RBP4.58□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Adgrg4B7ZCC9 3073 aa4.58□□□□□ -1.68
Ptpre-204ENSMUST00000209979 2210017I01RikA0A0A6YVV1 95 aa4.57□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Gm884A2A9H6 3643 aa4.56□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Trank1Q8BV79 2999 aa4.56□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Krtap28-13A0A087WQP5 138 aa4.56□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Col6a3E9PWQ3 3284 aa4.55□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Celsr3Q91ZI0 3301 aa4.55□□□□□ -1.68
Ptpre-204ENSMUST00000209979 Gm2696A0A1W2P709 240 aa4.52□□□□□ -1.69
Ptpre-204ENSMUST00000209979 Nf1Q04690 2841 aa4.52□□□□□ -1.69
Ptpre-204ENSMUST00000209979 Chd9Q8BYH8 2885 aa4.52□□□□□ -1.69
Ptpre-204ENSMUST00000209979 Celsr2Q9R0M0 2920 aa4.52□□□□□ -1.69
Ptpre-204ENSMUST00000209979 ApcQ61315 2845 aa4.5□□□□□ -1.69
Ptpre-204ENSMUST00000209979 Zzef1Q5SSH7 2924 aa4.5□□□□□ -1.69
Ptpre-204ENSMUST00000209979 Akap9Q70FJ1 3797 aa4.5□□□□□ -1.69
Ptpre-204ENSMUST00000209979 A030003K21RikA0A1Y7VIM3 128 aa4.48□□□□□ -1.69
Ptpre-204ENSMUST00000209979 A030005K14RikA0A1Y7VNY1 122 aa4.48□□□□□ -1.69
Ptpre-204ENSMUST00000209979 Brca2P97929 3329 aa4.47□□□□□ -1.69
Ptpre-204ENSMUST00000209979 VcanQ62059 3357 aa4.47□□□□□ -1.69
Ptpre-204ENSMUST00000209979 Tenm3Q9WTS6 2715 aa4.42□□□□□ -1.7
Ptpre-204ENSMUST00000209979 LrbaQ9ESE1 2856 aa4.41□□□□□ -1.7
Ptpre-204ENSMUST00000209979 Muc5acE9QAQ8 3455 aa4.41□□□□□ -1.7
Ptpre-204ENSMUST00000209979 Pdzd2E9Q1M1 2796 aa4.4□□□□□ -1.7
Ptpre-204ENSMUST00000209979 Gm19668J3QMD1 248 aa4.39□□□□□ -1.71
Ptpre-204ENSMUST00000209979 SpegQ62407 3262 aa4.37□□□□□ -1.71
Ptpre-204ENSMUST00000209979 Zfhx4Q9JJN2 3550 aa4.37□□□□□ -1.71
Ptpre-204ENSMUST00000209979 A030005L19RikA0A1Y7VIU2 113 aa4.36□□□□□ -1.71
Ptpre-204ENSMUST00000209979 Dchs1E9PVD3 3291 aa4.34□□□□□ -1.72
Ptpre-204ENSMUST00000209979 Vps13cQ8BX70 3748 aa4.34□□□□□ -1.72
Ptpre-204ENSMUST00000209979 Helz2E9QAM5 2947 aaKnown RBP4.32□□□□□ -1.72
Ptpre-204ENSMUST00000209979 Ank2Q8C8R3 3898 aa4.32□□□□□ -1.72
Ptpre-204ENSMUST00000209979 Tenm1Q9WTS4 2731 aa4.3□□□□□ -1.72
Ptpre-204ENSMUST00000209979 Gm7544A0A1Y7VJ58 118 aa4.29□□□□□ -1.72
Ptpre-204ENSMUST00000209979 Krtap13-1Q8K198 168 aa4.26□□□□□ -1.73
Ptpre-204ENSMUST00000209979 A0A1Y7VJ07 166 aa4.26□□□□□ -1.73
Ptpre-204ENSMUST00000209979 Myo15aQ9QZZ4 3511 aa4.25□□□□□ -1.73
Ptpre-204ENSMUST00000209979 Gm6217A0A1Y7VJK9 128 aa4.23□□□□□ -1.73
Ptpre-204ENSMUST00000209979 Megf8P60882 2789 aa4.22□□□□□ -1.73
Ptpre-204ENSMUST00000209979 RelnQ60841 3461 aa4.22□□□□□ -1.73
Ptpre-204ENSMUST00000209979 Tenm2Q9WTS5 2764 aa4.21□□□□□ -1.74
Ptpre-204ENSMUST00000209979 Gm11939A2A592 99 aa4.2□□□□□ -1.74
Ptpre-204ENSMUST00000209979 OtogO55225 2910 aa4.19□□□□□ -1.74
Ptpre-204ENSMUST00000209979 Krtap3-1A2A591 98 aa4.18□□□□□ -1.74
Ptpre-204ENSMUST00000209979 Krtap3-2Q9D638 99 aa4.17□□□□□ -1.74
Ptpre-204ENSMUST00000209979 Krtap3-3Q9D7P0 99 aa4.17□□□□□ -1.74
Ptpre-204ENSMUST00000209979 Dnah7bL7N1Y0 4068 aa4.15□□□□□ -1.74
Ptpre-204ENSMUST00000209979 Gm9736A0A1W2P7N1 277 aa4.12□□□□□ -1.75
Ptpre-204ENSMUST00000209979 Gm9918Q8BUR5 174 aa4.12□□□□□ -1.75
Ptpre-204ENSMUST00000209979 Col7a1Q63870 2944 aa4.12□□□□□ -1.75
Ptpre-204ENSMUST00000209979 Cmya5Q70KF4 3739 aa4.12□□□□□ -1.75
Ptpre-204ENSMUST00000209979 Krtap7-1Q9D3I6 87 aa4.1□□□□□ -1.75
Ptpre-204ENSMUST00000209979 Smg1Q8BKX6 3658 aaKnown RBP4.09□□□□□ -1.76
Ptpre-204ENSMUST00000209979 BsnO88737 3942 aa4.07□□□□□ -1.76
Ptpre-204ENSMUST00000209979 Csmd1Q923L3 3564 aa4.07□□□□□ -1.76
Ptpre-204ENSMUST00000209979 VwfQ8CIZ8 2813 aa4.03□□□□□ -1.76
Ptpre-204ENSMUST00000209979 Fbn1Q61554 2873 aaKnown RBP4.03□□□□□ -1.76
Ptpre-204ENSMUST00000209979 CubnQ9JLB4 3623 aa4.02□□□□□ -1.77
Ptpre-204ENSMUST00000209979 Dnah3Q8BW94 4083 aa4□□□□□ -1.77
Ptpre-204ENSMUST00000209979 Krtap19-5O08632 62 aa3.99□□□□□ -1.77
Ptpre-204ENSMUST00000209979 Kmt2aP55200 3966 aa3.99□□□□□ -1.77
Ptpre-204ENSMUST00000209979 Muc6Q80T03 2850 aa3.98□□□□□ -1.77
Ptpre-204ENSMUST00000209979 Sprr2a3Q4KL71 83 aa3.96□□□□□ -1.77
Ptpre-204ENSMUST00000209979 Sprr2a1Q9CQK8 83 aa3.96□□□□□ -1.77
Ptpre-204ENSMUST00000209979 Lama5Q61001 3718 aa3.95□□□□□ -1.78
Ptpre-204ENSMUST00000209979 A030014E15RikA0A1Y7VJV2 120 aa3.93□□□□□ -1.78
Ptpre-204ENSMUST00000209979 Hspg2Q05793 3707 aaKnown RBP3.91□□□□□ -1.78
Ptpre-204ENSMUST00000209979 Muc4Q8JZM8 3443 aa3.91□□□□□ -1.78
Ptpre-204ENSMUST00000209979 Csmd3Q80T79 3707 aa3.9□□□□□ -1.78
Ptpre-204ENSMUST00000209979 Svep1A2AVA0 3567 aa3.89□□□□□ -1.79
Ptpre-204ENSMUST00000209979 Dync2h1Q45VK7 4306 aa3.88□□□□□ -1.79
Ptpre-204ENSMUST00000209979 Xirp2Q4U4S6 3784 aa3.84□□□□□ -1.8
Ptpre-204ENSMUST00000209979 Dnah6E9Q0B6 4144 aa3.83□□□□□ -1.8
Ptpre-204ENSMUST00000209979 Krtap4-1Q3UUY3 169 aa3.83□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms