RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Zfhx3Q61329 3726 aa12.39□□□□□ -0.43
Sox1-201ENSMUST00000180353 Vps13cQ8BX70 3748 aa12.39□□□□□ -0.43
Sox1-201ENSMUST00000180353 Akap9Q70FJ1 3797 aa12.38□□□□□ -0.43
Sox1-201ENSMUST00000180353 Cox6b2Q80ZN9 88 aa12.37□□□□□ -0.43
Sox1-201ENSMUST00000180353 LrbaQ9ESE1 2856 aa12.34□□□□□ -0.43
Sox1-201ENSMUST00000180353 Csmd1Q923L3 3564 aa12.31□□□□□ -0.44
Sox1-201ENSMUST00000180353 Tenm3Q9WTS6 2715 aa12.3□□□□□ -0.44
Sox1-201ENSMUST00000180353 Krtap29-1A2A5X4 342 aa12.28□□□□□ -0.44
Sox1-201ENSMUST00000180353 Fam229aB2KGE5 128 aa12.26□□□□□ -0.45
Sox1-201ENSMUST00000180353 Pdzd2E9Q1M1 2796 aa12.25□□□□□ -0.45
Sox1-201ENSMUST00000180353 Helz2E9QAM5 2947 aaKnown RBP12.25□□□□□ -0.45
Sox1-201ENSMUST00000180353 SpenQ62504 3644 aaKnown RBP12.24□□□□□ -0.45
Sox1-201ENSMUST00000180353 2310050C09RikG5E8Z3 280 aa12.22□□□□□ -0.45
Sox1-201ENSMUST00000180353 Srrm2Q8BTI8 2703 aaKnown RBP12.22□□□□□ -0.45
Sox1-201ENSMUST00000180353 D6Ertd527eA0A0N4SWI3 464 aa12.2□□□□□ -0.46
Sox1-201ENSMUST00000180353 2310061N02RikQ9D6S9 174 aa12.2□□□□□ -0.46
Sox1-201ENSMUST00000180353 Krtap13O88375 197 aa12.14□□□□□ -0.47
Sox1-201ENSMUST00000180353 Gm19426M0QWC7 77 aa12.09□□□□□ -0.47
Sox1-201ENSMUST00000180353 Gm9112A2AI92 75 aa12.08□□□□□ -0.48
Sox1-201ENSMUST00000180353 Gm9507D3Z5T3 223 aa12.07□□□□□ -0.48
Sox1-201ENSMUST00000180353 Smg1Q8BKX6 3658 aaKnown RBP12.06□□□□□ -0.48
Sox1-201ENSMUST00000180353 Spink7Q6IE32 76 aa12□□□□□ -0.49
Sox1-201ENSMUST00000180353 Gm20537G3UYK7 97 aa11.99□□□□□ -0.49
Sox1-201ENSMUST00000180353 Muc5acE9QAQ8 3455 aa11.99□□□□□ -0.49
Sox1-201ENSMUST00000180353 Prm2P07978 107 aa11.98□□□□□ -0.49
Sox1-201ENSMUST00000180353 FcgbpE9Q0B5 2583 aa11.97□□□□□ -0.49
Sox1-201ENSMUST00000180353 Krtap15-1Q9QZU5 150 aa11.92□□□□□ -0.5
Sox1-201ENSMUST00000180353 Tenm4Q3UHK6 2771 aa11.92□□□□□ -0.5
Sox1-201ENSMUST00000180353 Krtap10-4Q08EG8 221 aa11.9□□□□□ -0.5
Sox1-201ENSMUST00000180353 Camk2n1Q6QWF9 78 aa11.88□□□□□ -0.51
Sox1-201ENSMUST00000180353 Gm5767A0A0J9YTU8 78 aa11.87□□□□□ -0.51
Sox1-201ENSMUST00000180353 Tnp2P11378 117 aa11.85□□□□□ -0.51
Sox1-201ENSMUST00000180353 Zfhx4Q9JJN2 3550 aa11.85□□□□□ -0.51
Sox1-201ENSMUST00000180353 BC029722A0A0N4SW31 51 aa11.83□□□□□ -0.52
Sox1-201ENSMUST00000180353 Lama5Q61001 3718 aa11.78□□□□□ -0.52
Sox1-201ENSMUST00000180353 Gm884A2A9H6 3643 aa11.77□□□□□ -0.53
Sox1-201ENSMUST00000180353 2310079G19RikQ9D6L6 185 aa11.7□□□□□ -0.54
Sox1-201ENSMUST00000180353 Rps29P62274 56 aa11.69□□□□□ -0.54
Sox1-201ENSMUST00000180353 Krtap10-10A0A1W2P7T6 217 aa11.67□□□□□ -0.54
Sox1-201ENSMUST00000180353 Gm40193A0A1B0GT39 78 aa11.67□□□□□ -0.54
Sox1-201ENSMUST00000180353 OtogO55225 2910 aa11.66□□□□□ -0.54
Sox1-201ENSMUST00000180353 Sec61bQ9CQS8 96 aaKnown RBP11.61□□□□□ -0.55
Sox1-201ENSMUST00000180353 A930033H14RikG5E8X6 103 aa11.58□□□□□ -0.56
Sox1-201ENSMUST00000180353 Gm5965D3Z724 196 aa11.53□□□□□ -0.56
Sox1-201ENSMUST00000180353 Svep1A2AVA0 3567 aa11.43□□□□□ -0.58
Sox1-201ENSMUST00000180353 Gm2696A0A1W2P709 240 aa11.4□□□□□ -0.58
Sox1-201ENSMUST00000180353 Cmya5Q70KF4 3739 aa11.39□□□□□ -0.59
Sox1-201ENSMUST00000180353 Tenm1Q9WTS4 2731 aa11.38□□□□□ -0.59
Sox1-201ENSMUST00000180353 Muc4Q8JZM8 3443 aa11.34□□□□□ -0.59
Sox1-201ENSMUST00000180353 2310057N15RikQ9D6T8 200 aa11.28□□□□□ -0.6
Sox1-201ENSMUST00000180353 Gm21887J3QQ04 176 aa11.28□□□□□ -0.6
Sox1-201ENSMUST00000180353 B930094E09RikQ8C4T2 136 aa11.2□□□□□ -0.62
Sox1-201ENSMUST00000180353 Fbn1Q61554 2873 aaKnown RBP11.12□□□□□ -0.63
Sox1-201ENSMUST00000180353 VwfQ8CIZ8 2813 aa11.07□□□□□ -0.64
Sox1-201ENSMUST00000180353 Tenm2Q9WTS5 2764 aa11.03□□□□□ -0.64
Sox1-201ENSMUST00000180353 Tnp1P10856 55 aa11.01□□□□□ -0.65
Sox1-201ENSMUST00000180353 Csmd2V9GX34 3611 aa10.77□□□□□ -0.68
Sox1-201ENSMUST00000180353 Megf8P60882 2789 aa10.77□□□□□ -0.69
Sox1-201ENSMUST00000180353 Gm17416Q30KP4 66 aa10.69□□□□□ -0.7
Sox1-201ENSMUST00000180353 Col7a1Q63870 2944 aa10.67□□□□□ -0.7
Sox1-201ENSMUST00000180353 Krtap3-2Q9D638 99 aa10.67□□□□□ -0.7
Sox1-201ENSMUST00000180353 Krtap3-3Q9D7P0 99 aa10.67□□□□□ -0.7
Sox1-201ENSMUST00000180353 Ank2Q8C8R3 3898 aa10.67□□□□□ -0.7
Sox1-201ENSMUST00000180353 Gm17402F6Z0L5 76 aa10.64□□□□□ -0.71
Sox1-201ENSMUST00000180353 2210017I01RikA0A0A6YVV1 95 aa10.56□□□□□ -0.72
Sox1-201ENSMUST00000180353 LystP97412 3788 aa10.55□□□□□ -0.72
Sox1-201ENSMUST00000180353 CubnQ9JLB4 3623 aa10.49□□□□□ -0.73
Sox1-201ENSMUST00000180353 Gm9736A0A1W2P7N1 277 aa10.48□□□□□ -0.73
Sox1-201ENSMUST00000180353 Gm11939A2A592 99 aa10.48□□□□□ -0.73
Sox1-201ENSMUST00000180353 Gm9918Q8BUR5 174 aa10.46□□□□□ -0.74
Sox1-201ENSMUST00000180353 Muc6Q80T03 2850 aa10.43□□□□□ -0.74
Sox1-201ENSMUST00000180353 Krtap3-1A2A591 98 aa10.19□□□□□ -0.78
Sox1-201ENSMUST00000180353 Dnah14A0A140LIJ4 4489 aa10.17□□□□□ -0.78
Sox1-201ENSMUST00000180353 Krtap7-1Q9D3I6 87 aa10.14□□□□□ -0.79
Sox1-201ENSMUST00000180353 Krtap13-1Q8K198 168 aa10.06□□□□□ -0.8
Sox1-201ENSMUST00000180353 Xirp2Q4U4S6 3784 aa10.03□□□□□ -0.8
Sox1-201ENSMUST00000180353 Krtap19-5O08632 62 aa9.97□□□□□ -0.81
Sox1-201ENSMUST00000180353 Hspg2Q05793 3707 aaKnown RBP9.88□□□□□ -0.83
Sox1-201ENSMUST00000180353 Gm19668J3QMD1 248 aa9.87□□□□□ -0.83
Sox1-201ENSMUST00000180353 Dnah10D3YYQ8 4591 aa9.86□□□□□ -0.83
Sox1-201ENSMUST00000180353 BsnO88737 3942 aa9.86□□□□□ -0.83
Sox1-201ENSMUST00000180353 Csmd3Q80T79 3707 aa9.85□□□□□ -0.83
Sox1-201ENSMUST00000180353 Huwe1Q7TMY8 4377 aaKnown RBP9.81□□□□□ -0.84
Sox1-201ENSMUST00000180353 Gm10318A0A1W2P728 225 aa9.78□□□□□ -0.84
Sox1-201ENSMUST00000180353 4933428G20RikQ9D3X4 101 aa9.72□□□□□ -0.85
Sox1-201ENSMUST00000180353 Dnah17Q69Z23 4481 aa9.69□□□□□ -0.86
Sox1-201ENSMUST00000180353 Dnah5Q8VHE6 4621 aa9.62□□□□□ -0.87
Sox1-201ENSMUST00000180353 Crct1Q6PAI5 102 aa9.54□□□□□ -0.88
Sox1-201ENSMUST00000180353 Dnah7bL7N1Y0 4068 aa9.5□□□□□ -0.89
Sox1-201ENSMUST00000180353 Dnah11E9Q7N9 4488 aa9.48□□□□□ -0.89
Sox1-201ENSMUST00000180353 Sprr2a3Q4KL71 83 aa9.48□□□□□ -0.89
Sox1-201ENSMUST00000180353 Sprr2a1Q9CQK8 83 aa9.48□□□□□ -0.89
Sox1-201ENSMUST00000180353 PlecQ9QXS1 4691 aaKnown RBP9.47□□□□□ -0.89
Sox1-201ENSMUST00000180353 Vps13dB1ART2 4390 aa9.44□□□□□ -0.9
Sox1-201ENSMUST00000180353 Stard9Q80TF6 4561 aa9.4□□□□□ -0.9
Sox1-201ENSMUST00000180353 Dnah9B1AR51 4484 aa9.35□□□□□ -0.91
Sox1-201ENSMUST00000180353 Gm19402J3QJV4 266 aa9.25□□□□□ -0.93
Sox1-201ENSMUST00000180353 Krtap1-5A2A590 122 aa9.16□□□□□ -0.94
Sox1-201ENSMUST00000180353 TnxbO35452 4006 aa9.15□□□□□ -0.94
Sox1-201ENSMUST00000180353 Lrp1bQ9JI18 4599 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms