RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Hivep1Q03172 2688 aa5.64□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 SpenQ62504 3644 aaKnown RBP5.63□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 Gm10139O88245 57 aa5.62□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 Rps29P62274 56 aa5.62□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 Gm19402J3QJV4 266 aa5.6□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 Romo1P60603 79 aa5.6□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 Akap9Q70FJ1 3797 aa5.6□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 Cystm1Q8K353 104 aa5.59□□□□□ -1.51
Pdgfra-202ENSMUST00000168162 RelnQ60841 3461 aa5.58□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Muc2Q80Z19 2680 aa5.58□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Csmd1Q923L3 3564 aa5.58□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Muc5acE9QAQ8 3455 aa5.57□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Gm16253D3Z167 63 aa5.57□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Gm21887J3QQ04 176 aa5.55□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 4933415A04RikQ9D443 101 aa5.55□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Chd9Q8BYH8 2885 aa5.53□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 KalrnA2CG49 2964 aa5.53□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Muc4Q8JZM8 3443 aa5.53□□□□□ -1.52
Pdgfra-202ENSMUST00000168162 Adgrg4B7ZCC9 3073 aa5.52□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 Ndufaf8A2AMZ4 74 aa5.51□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 Cox6b2Q80ZN9 88 aa5.51□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 Dmxl1Q6PNC0 3013 aa5.5□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 Gm37013Q8K491 104 aa5.49□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 Vps13cQ8BX70 3748 aa5.49□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 Smg1Q8BKX6 3658 aaKnown RBP5.48□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 2310046K23RikA0A0A6YVW6 87 aa5.46□□□□□ -1.53
Pdgfra-202ENSMUST00000168162 Gm884A2A9H6 3643 aa5.46□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 NipblQ6KCD5 2798 aaKnown RBP5.46□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 Prm2P07978 107 aa5.46□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 B930094E09RikQ8C4T2 136 aa5.45□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 Celsr1O35161 3034 aa5.45□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 Prrc2cQ3TLH4 2846 aaKnown RBP5.45□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 Dmxl2Q8BPN8 3032 aa5.44□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 Tenm2Q9WTS5 2764 aa5.43□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 Gm9112A2AI92 75 aa5.43□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 A730071L15RikQ8C4X0 137 aa5.4□□□□□ -1.54
Pdgfra-202ENSMUST00000168162 Fbn2Q61555 2907 aa5.39□□□□□ -1.55
Pdgfra-202ENSMUST00000168162 Tnrc18Q80WC3 2878 aa5.37□□□□□ -1.55
Pdgfra-202ENSMUST00000168162 Trank1Q8BV79 2999 aa5.36□□□□□ -1.55
Pdgfra-202ENSMUST00000168162 Chd7A2AJK6 2986 aaKnown RBP5.36□□□□□ -1.55
Pdgfra-202ENSMUST00000168162 Svep1A2AVA0 3567 aa5.36□□□□□ -1.55
Pdgfra-202ENSMUST00000168162 Nf1Q04690 2841 aa5.35□□□□□ -1.55
Pdgfra-202ENSMUST00000168162 Krtap17-1A2A5X6 109 aa5.33□□□□□ -1.56
Pdgfra-202ENSMUST00000168162 Gm6358A0A087WPH4 74 aa5.3□□□□□ -1.56
Pdgfra-202ENSMUST00000168162 SmcpP15265 143 aa5.3□□□□□ -1.56
Pdgfra-202ENSMUST00000168162 Megf8P60882 2789 aa5.27□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Gm20537G3UYK7 97 aa5.27□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Tnp1P10856 55 aa5.27□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Tenm1Q9WTS4 2731 aa5.26□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Krtap8-1O08633 61 aa5.26□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Cmya5Q70KF4 3739 aa5.25□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Srrm2Q8BTI8 2703 aaKnown RBP5.25□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Lama5Q61001 3718 aa5.24□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Krtap19-5O08632 62 aa5.23□□□□□ -1.57
Pdgfra-202ENSMUST00000168162 Lce1mQ9CR91 182 aa5.21□□□□□ -1.58
Pdgfra-202ENSMUST00000168162 Utp20Q5XG71 2788 aaKnown RBP5.2□□□□□ -1.58
Pdgfra-202ENSMUST00000168162 Csmd2V9GX34 3611 aa5.2□□□□□ -1.58
Pdgfra-202ENSMUST00000168162 DspE9Q557 2883 aaKnown RBP5.19□□□□□ -1.58
Pdgfra-202ENSMUST00000168162 NbeaQ9EPN1 2936 aa5.17□□□□□ -1.58
Pdgfra-202ENSMUST00000168162 LorP18165 486 aa5.15□□□□□ -1.59
Pdgfra-202ENSMUST00000168162 CubnQ9JLB4 3623 aa5.08□□□□□ -1.6
Pdgfra-202ENSMUST00000168162 Tex15F8VPN2 2785 aa5.08□□□□□ -1.6
Pdgfra-202ENSMUST00000168162 Pdzd2E9Q1M1 2796 aa5.02□□□□□ -1.61
Pdgfra-202ENSMUST00000168162 Sprr2fO70557 76 aa5.01□□□□□ -1.61
Pdgfra-202ENSMUST00000168162 Zzef1Q5SSH7 2924 aa5.01□□□□□ -1.61
Pdgfra-202ENSMUST00000168162 Tenm3Q9WTS6 2715 aa5□□□□□ -1.61
Pdgfra-202ENSMUST00000168162 Gm40193A0A1B0GT39 78 aa4.99□□□□□ -1.61
Pdgfra-202ENSMUST00000168162 TgO08710 2766 aa4.97□□□□□ -1.61
Pdgfra-202ENSMUST00000168162 Krtap4-2B1AQ85 167 aa4.93□□□□□ -1.62
Pdgfra-202ENSMUST00000168162 Gm38119A0A0A6YX29 146 aa4.9□□□□□ -1.63
Pdgfra-202ENSMUST00000168162 Col7a1Q63870 2944 aa4.88□□□□□ -1.63
Pdgfra-202ENSMUST00000168162 LrbaQ9ESE1 2856 aa4.88□□□□□ -1.63
Pdgfra-202ENSMUST00000168162 2310079G19RikQ9D6L6 185 aa4.88□□□□□ -1.63
Pdgfra-202ENSMUST00000168162 VwfQ8CIZ8 2813 aa4.88□□□□□ -1.63
Pdgfra-202ENSMUST00000168162 2210017I01RikA0A0A6YVV1 95 aa4.87□□□□□ -1.63
Pdgfra-202ENSMUST00000168162 Gm19668J3QMD1 248 aa4.78□□□□□ -1.64
Pdgfra-202ENSMUST00000168162 Celsr2Q9R0M0 2920 aa4.78□□□□□ -1.64
Pdgfra-202ENSMUST00000168162 ApcQ61315 2845 aa4.77□□□□□ -1.65
Pdgfra-202ENSMUST00000168162 LystP97412 3788 aa4.74□□□□□ -1.65
Pdgfra-202ENSMUST00000168162 Fbn1Q61554 2873 aaKnown RBP4.74□□□□□ -1.65
Pdgfra-202ENSMUST00000168162 Prm1P02319 51 aa4.73□□□□□ -1.65
Pdgfra-202ENSMUST00000168162 Gm17416Q30KP4 66 aa4.73□□□□□ -1.65
Pdgfra-202ENSMUST00000168162 Sprr2iO70560 76 aa4.71□□□□□ -1.66
Pdgfra-202ENSMUST00000168162 Xirp2Q4U4S6 3784 aa4.69□□□□□ -1.66
Pdgfra-202ENSMUST00000168162 OtogO55225 2910 aa4.68□□□□□ -1.66
Pdgfra-202ENSMUST00000168162 Krtap13-1Q8K198 168 aa4.68□□□□□ -1.66
Pdgfra-202ENSMUST00000168162 Lce1gQ9D195 139 aa4.61□□□□□ -1.67
Pdgfra-202ENSMUST00000168162 Krtap9-5A2A5X3 358 aa4.58□□□□□ -1.68
Pdgfra-202ENSMUST00000168162 Helz2E9QAM5 2947 aaKnown RBP4.57□□□□□ -1.68
Pdgfra-202ENSMUST00000168162 Hspg2Q05793 3707 aaKnown RBP4.56□□□□□ -1.68
Pdgfra-202ENSMUST00000168162 Lce3bQ9CQM7 98 aa4.54□□□□□ -1.68
Pdgfra-202ENSMUST00000168162 Gm7735D3YX18 52 aa4.54□□□□□ -1.68
Pdgfra-202ENSMUST00000168162 Csmd3Q80T79 3707 aa4.53□□□□□ -1.68
Pdgfra-202ENSMUST00000168162 Gm11569B1AQB1 180 aa4.52□□□□□ -1.69
Pdgfra-202ENSMUST00000168162 Lce1lQ9D1G7 135 aa4.52□□□□□ -1.69
Pdgfra-202ENSMUST00000168162 Krtap19-9aF8WH65 55 aa4.51□□□□□ -1.69
Pdgfra-202ENSMUST00000168162 Mt4P47945 62 aa4.47□□□□□ -1.69
Pdgfra-202ENSMUST00000168162 Ank2Q8C8R3 3898 aa4.44□□□□□ -1.7
Pdgfra-202ENSMUST00000168162 Muc6Q80T03 2850 aa4.42□□□□□ -1.7
Pdgfra-202ENSMUST00000168162 Krtap7-1Q9D3I6 87 aa4.42□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 111.3 ms