RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Gm11565A2A4M7 156 aa7.27□□□□□ -1.25
Ndc1-204ENSMUST00000139560 CriptO70333 101 aa7.27□□□□□ -1.25
Ndc1-204ENSMUST00000139560 Tenm3Q9WTS6 2715 aa7.26□□□□□ -1.25
Ndc1-204ENSMUST00000139560 Col7a1Q63870 2944 aa7.24□□□□□ -1.25
Ndc1-204ENSMUST00000139560 Tenm1Q9WTS4 2731 aa7.24□□□□□ -1.25
Ndc1-204ENSMUST00000139560 Gm17349F7BGH6 99 aa7.21□□□□□ -1.26
Ndc1-204ENSMUST00000139560 Gm3646F6S692 53 aa7.2□□□□□ -1.26
Ndc1-204ENSMUST00000139560 Tenm4Q3UHK6 2771 aa7.19□□□□□ -1.26
Ndc1-204ENSMUST00000139560 Gm26620Q9CY65 116 aa7.16□□□□□ -1.26
Ndc1-204ENSMUST00000139560 NbdyA0A0N4SUI7 68 aa7.15□□□□□ -1.26
Ndc1-204ENSMUST00000139560 Gm10065F6TJM2 114 aa7.14□□□□□ -1.27
Ndc1-204ENSMUST00000139560 Gm37013Q8K491 104 aa7.12□□□□□ -1.27
Ndc1-204ENSMUST00000139560 Cypt14J3QPF7 87 aa7.11□□□□□ -1.27
Ndc1-204ENSMUST00000139560 Gm9821Q8K076 103 aa7.1□□□□□ -1.27
Ndc1-204ENSMUST00000139560 Gm10139O88245 57 aa7.1□□□□□ -1.27
Ndc1-204ENSMUST00000139560 Sprr1aQ62266 144 aa7.1□□□□□ -1.27
Ndc1-204ENSMUST00000139560 Krtap13O88375 197 aa7.08□□□□□ -1.28
Ndc1-204ENSMUST00000139560 Odf3bQ5M8M2 238 aa7.07□□□□□ -1.28
Ndc1-204ENSMUST00000139560 4933415A04RikQ9D443 101 aa7.04□□□□□ -1.28
Ndc1-204ENSMUST00000139560 Gm9507D3Z5T3 223 aa7.03□□□□□ -1.28
Ndc1-204ENSMUST00000139560 1700042G07RikB1AUF7 90 aa7.02□□□□□ -1.29
Ndc1-204ENSMUST00000139560 Gm4491E0CX42 125 aa7.02□□□□□ -1.29
Ndc1-204ENSMUST00000139560 Krtap10-4Q08EG8 221 aa7□□□□□ -1.29
Ndc1-204ENSMUST00000139560 Krtap15-1Q9QZU5 150 aa6.94□□□□□ -1.3
Ndc1-204ENSMUST00000139560 Gm16253D3Z167 63 aa6.94□□□□□ -1.3
Ndc1-204ENSMUST00000139560 Fbn1Q61554 2873 aaKnown RBP6.92□□□□□ -1.3
Ndc1-204ENSMUST00000139560 VwfQ8CIZ8 2813 aa6.91□□□□□ -1.3
Ndc1-204ENSMUST00000139560 Megf8P60882 2789 aa6.89□□□□□ -1.31
Ndc1-204ENSMUST00000139560 Krtap10-10A0A1W2P7T6 217 aa6.87□□□□□ -1.31
Ndc1-204ENSMUST00000139560 Spink7Q6IE32 76 aa6.87□□□□□ -1.31
Ndc1-204ENSMUST00000139560 Gm9955Q8CEJ8 102 aa6.87□□□□□ -1.31
Ndc1-204ENSMUST00000139560 Pla2g10Q9QXX3 151 aa6.86□□□□□ -1.31
Ndc1-204ENSMUST00000139560 2310050C09RikG5E8Z3 280 aa6.86□□□□□ -1.31
Ndc1-204ENSMUST00000139560 Csmd3Q80T79 3707 aa6.85□□□□□ -1.31
Ndc1-204ENSMUST00000139560 Gm2310J3QNJ2 377 aa6.79□□□□□ -1.32
Ndc1-204ENSMUST00000139560 2310061N02RikQ9D6S9 174 aa6.79□□□□□ -1.32
Ndc1-204ENSMUST00000139560 Krtap29-1A2A5X4 342 aa6.77□□□□□ -1.32
Ndc1-204ENSMUST00000139560 Krtap14O08640 167 aa6.76□□□□□ -1.33
Ndc1-204ENSMUST00000139560 Tenm2Q9WTS5 2764 aa6.73□□□□□ -1.33
Ndc1-204ENSMUST00000139560 Rpl37Q9D823 97 aa6.71□□□□□ -1.34
Ndc1-204ENSMUST00000139560 Gm10382Q3V0T5 144 aa6.7□□□□□ -1.34
Ndc1-204ENSMUST00000139560 Gm2696A0A1W2P709 240 aa6.68□□□□□ -1.34
Ndc1-204ENSMUST00000139560 Romo1P60603 79 aa6.66□□□□□ -1.34
Ndc1-204ENSMUST00000139560 Gm5767A0A0J9YTU8 78 aa6.66□□□□□ -1.34
Ndc1-204ENSMUST00000139560 Kmt2aP55200 3966 aa6.65□□□□□ -1.35
Ndc1-204ENSMUST00000139560 Fam229aB2KGE5 128 aa6.63□□□□□ -1.35
Ndc1-204ENSMUST00000139560 Gm20538F6Z9R1 75 aa6.62□□□□□ -1.35
Ndc1-204ENSMUST00000139560 Sec61bQ9CQS8 96 aaKnown RBP6.59□□□□□ -1.36
Ndc1-204ENSMUST00000139560 Dnah10D3YYQ8 4591 aa6.54□□□□□ -1.36
Ndc1-204ENSMUST00000139560 Dnah7bL7N1Y0 4068 aa6.53□□□□□ -1.36
Ndc1-204ENSMUST00000139560 D6Ertd527eA0A0N4SWI3 464 aa6.52□□□□□ -1.37
Ndc1-204ENSMUST00000139560 Tnp2P11378 117 aa6.51□□□□□ -1.37
Ndc1-204ENSMUST00000139560 Dnah3Q8BW94 4083 aa6.5□□□□□ -1.37
Ndc1-204ENSMUST00000139560 Camk2n1Q6QWF9 78 aa6.5□□□□□ -1.37
Ndc1-204ENSMUST00000139560 Cox6b2Q80ZN9 88 aa6.5□□□□□ -1.37
Ndc1-204ENSMUST00000139560 BC029722A0A0N4SW31 51 aa6.47□□□□□ -1.37
Ndc1-204ENSMUST00000139560 Ndufaf8A2AMZ4 74 aa6.47□□□□□ -1.37
Ndc1-204ENSMUST00000139560 Gm19426M0QWC7 77 aa6.46□□□□□ -1.38
Ndc1-204ENSMUST00000139560 Dnah6E9Q0B6 4144 aa6.46□□□□□ -1.38
Ndc1-204ENSMUST00000139560 Muc6Q80T03 2850 aa6.41□□□□□ -1.38
Ndc1-204ENSMUST00000139560 Dnah1E9Q8T7 4250 aa6.37□□□□□ -1.39
Ndc1-204ENSMUST00000139560 Gm5965D3Z724 196 aa6.36□□□□□ -1.39
Ndc1-204ENSMUST00000139560 Gm20537G3UYK7 97 aa6.35□□□□□ -1.39
Ndc1-204ENSMUST00000139560 Rps29P62274 56 aa6.3□□□□□ -1.4
Ndc1-204ENSMUST00000139560 2310057N15RikQ9D6T8 200 aa6.27□□□□□ -1.41
Ndc1-204ENSMUST00000139560 Dnah14A0A140LIJ4 4489 aa6.25□□□□□ -1.41
Ndc1-204ENSMUST00000139560 Fras1Q80T14 4010 aa6.22□□□□□ -1.41
Ndc1-204ENSMUST00000139560 Dnah9B1AR51 4484 aa6.21□□□□□ -1.42
Ndc1-204ENSMUST00000139560 Gm9112A2AI92 75 aa6.18□□□□□ -1.42
Ndc1-204ENSMUST00000139560 Dync2h1Q45VK7 4306 aa6.17□□□□□ -1.42
Ndc1-204ENSMUST00000139560 2310079G19RikQ9D6L6 185 aa6.16□□□□□ -1.42
Ndc1-204ENSMUST00000139560 Dnah11E9Q7N9 4488 aa6.14□□□□□ -1.43
Ndc1-204ENSMUST00000139560 Dnah17Q69Z23 4481 aa6.13□□□□□ -1.43
Ndc1-204ENSMUST00000139560 Gm21887J3QQ04 176 aa6.1□□□□□ -1.43
Ndc1-204ENSMUST00000139560 Dnah7aE9Q0T8 4024 aa6.1□□□□□ -1.43
Ndc1-204ENSMUST00000139560 PrkdcP97313 4128 aa6.09□□□□□ -1.43
Ndc1-204ENSMUST00000139560 Gm9736A0A1W2P7N1 277 aa6.08□□□□□ -1.44
Ndc1-204ENSMUST00000139560 Dnah7cA0A087WR13 4024 aa6.08□□□□□ -1.44
Ndc1-204ENSMUST00000139560 Prm2P07978 107 aa6.06□□□□□ -1.44
Ndc1-204ENSMUST00000139560 Dnah5Q8VHE6 4621 aa6.01□□□□□ -1.45
Ndc1-204ENSMUST00000139560 A930033H14RikG5E8X6 103 aa6.01□□□□□ -1.45
Ndc1-204ENSMUST00000139560 Huwe1Q7TMY8 4377 aaKnown RBP5.98□□□□□ -1.45
Ndc1-204ENSMUST00000139560 TnxbO35452 4006 aa5.98□□□□□ -1.45
Ndc1-204ENSMUST00000139560 B930094E09RikQ8C4T2 136 aa5.94□□□□□ -1.46
Ndc1-204ENSMUST00000139560 Gm10318A0A1W2P728 225 aa5.94□□□□□ -1.46
Ndc1-204ENSMUST00000139560 Stard9Q80TF6 4561 aa5.88□□□□□ -1.47
Ndc1-204ENSMUST00000139560 Pkhd1E9PZ36 4059 aa5.87□□□□□ -1.47
Ndc1-204ENSMUST00000139560 Hectd4E9Q2E4 4418 aa5.85□□□□□ -1.47
Ndc1-204ENSMUST00000139560 PlecQ9QXS1 4691 aaKnown RBP5.83□□□□□ -1.48
Ndc1-204ENSMUST00000139560 Pkd1O08852 4293 aa5.82□□□□□ -1.48
Ndc1-204ENSMUST00000139560 Tnp1P10856 55 aa5.8□□□□□ -1.48
Ndc1-204ENSMUST00000139560 Vps13dB1ART2 4390 aa5.79□□□□□ -1.48
Ndc1-204ENSMUST00000139560 Gm9918Q8BUR5 174 aa5.79□□□□□ -1.48
Ndc1-204ENSMUST00000139560 Gm40193A0A1B0GT39 78 aa5.78□□□□□ -1.48
Ndc1-204ENSMUST00000139560 Gm11939A2A592 99 aa5.77□□□□□ -1.49
Ndc1-204ENSMUST00000139560 Gm17416Q30KP4 66 aa5.73□□□□□ -1.49
Ndc1-204ENSMUST00000139560 Crct1Q6PAI5 102 aa5.7□□□□□ -1.5
Ndc1-204ENSMUST00000139560 Krtap3-2Q9D638 99 aa5.68□□□□□ -1.5
Ndc1-204ENSMUST00000139560 Krtap3-3Q9D7P0 99 aa5.68□□□□□ -1.5
Ndc1-204ENSMUST00000139560 2210017I01RikA0A0A6YVV1 95 aa5.67□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 66.8 ms