RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Tep1P97499 2629 aa5.66□□□□□ -1.5
Smchd1-201ENSMUST00000127430 Gm36176A0A1W2P8D5 158 aa5.64□□□□□ -1.51
Smchd1-201ENSMUST00000127430 Stab2Q8R4U0 2559 aa5.64□□□□□ -1.51
Smchd1-201ENSMUST00000127430 Rps29P62274 56 aa5.63□□□□□ -1.51
Smchd1-201ENSMUST00000127430 Myo15bI7HPW8 3033 aa5.63□□□□□ -1.51
Smchd1-201ENSMUST00000127430 Gm9918Q8BUR5 174 aa5.62□□□□□ -1.51
Smchd1-201ENSMUST00000127430 Ubr5Q80TP3 2792 aa5.61□□□□□ -1.51
Smchd1-201ENSMUST00000127430 9530053A07RikE9PVG8 2581 aa5.6□□□□□ -1.51
Smchd1-201ENSMUST00000127430 Itpr3P70227 2670 aa5.6□□□□□ -1.51
Smchd1-201ENSMUST00000127430 4933428G20RikQ9D3X4 101 aa5.59□□□□□ -1.51
Smchd1-201ENSMUST00000127430 Trank1Q8BV79 2999 aa5.58□□□□□ -1.52
Smchd1-201ENSMUST00000127430 Gm40193A0A1B0GT39 78 aa5.56□□□□□ -1.52
Smchd1-201ENSMUST00000127430 Tnp2P11378 117 aa5.56□□□□□ -1.52
Smchd1-201ENSMUST00000127430 2310061N02RikQ9D6S9 174 aa5.56□□□□□ -1.52
Smchd1-201ENSMUST00000127430 Adgrg4B7ZCC9 3073 aa5.54□□□□□ -1.52
Smchd1-201ENSMUST00000127430 Itpr1P11881 2749 aa5.54□□□□□ -1.52
Smchd1-201ENSMUST00000127430 Tnrc18Q80WC3 2878 aa5.53□□□□□ -1.52
Smchd1-201ENSMUST00000127430 Igsf10Q3V1M1 2594 aa5.53□□□□□ -1.52
Smchd1-201ENSMUST00000127430 Utp20Q5XG71 2788 aaKnown RBP5.51□□□□□ -1.53
Smchd1-201ENSMUST00000127430 Tnp1P10856 55 aa5.51□□□□□ -1.53
Smchd1-201ENSMUST00000127430 Pkd1l1Q8R526 2615 aa5.5□□□□□ -1.53
Smchd1-201ENSMUST00000127430 Gm20537G3UYK7 97 aa5.5□□□□□ -1.53
Smchd1-201ENSMUST00000127430 Chd9Q8BYH8 2885 aa5.49□□□□□ -1.53
Smchd1-201ENSMUST00000127430 Tex15F8VPN2 2785 aa5.47□□□□□ -1.53
Smchd1-201ENSMUST00000127430 TgO08710 2766 aa5.47□□□□□ -1.53
Smchd1-201ENSMUST00000127430 Nbeal2Q6ZQA0 2742 aa5.46□□□□□ -1.53
Smchd1-201ENSMUST00000127430 ApcQ61315 2845 aa5.46□□□□□ -1.53
Smchd1-201ENSMUST00000127430 LrbaQ9ESE1 2856 aa5.45□□□□□ -1.54
Smchd1-201ENSMUST00000127430 Fbn2Q61555 2907 aa5.45□□□□□ -1.54
Smchd1-201ENSMUST00000127430 Csmd2V9GX34 3611 aa5.43□□□□□ -1.54
Smchd1-201ENSMUST00000127430 Zzef1Q5SSH7 2924 aa5.41□□□□□ -1.54
Smchd1-201ENSMUST00000127430 Gm2696A0A1W2P709 240 aa5.39□□□□□ -1.55
Smchd1-201ENSMUST00000127430 Muc5acE9QAQ8 3455 aa5.39□□□□□ -1.55
Smchd1-201ENSMUST00000127430 Col6a5A6H584 2640 aa5.38□□□□□ -1.55
Smchd1-201ENSMUST00000127430 Gm10318A0A1W2P728 225 aa5.36□□□□□ -1.55
Smchd1-201ENSMUST00000127430 FcgbpE9Q0B5 2583 aa5.35□□□□□ -1.55
Smchd1-201ENSMUST00000127430 Lama5Q61001 3718 aa5.35□□□□□ -1.55
Smchd1-201ENSMUST00000127430 Srrm2Q8BTI8 2703 aaKnown RBP5.34□□□□□ -1.55
Smchd1-201ENSMUST00000127430 Muc4Q8JZM8 3443 aa5.32□□□□□ -1.56
Smchd1-201ENSMUST00000127430 Hivep1Q03172 2688 aa5.32□□□□□ -1.56
Smchd1-201ENSMUST00000127430 Svep1A2AVA0 3567 aa5.3□□□□□ -1.56
Smchd1-201ENSMUST00000127430 Muc2Q80Z19 2680 aa5.3□□□□□ -1.56
Smchd1-201ENSMUST00000127430 A930033H14RikG5E8X6 103 aa5.29□□□□□ -1.56
Smchd1-201ENSMUST00000127430 B930094E09RikQ8C4T2 136 aa5.29□□□□□ -1.56
Smchd1-201ENSMUST00000127430 2310079G19RikQ9D6L6 185 aa5.28□□□□□ -1.56
Smchd1-201ENSMUST00000127430 NbeaQ9EPN1 2936 aa5.25□□□□□ -1.57
Smchd1-201ENSMUST00000127430 Itpr2Q9Z329 2701 aa5.21□□□□□ -1.58
Smchd1-201ENSMUST00000127430 Igfn1Q3KNY0 2849 aa5.2□□□□□ -1.58
Smchd1-201ENSMUST00000127430 Csmd3Q80T79 3707 aa5.19□□□□□ -1.58
Smchd1-201ENSMUST00000127430 CubnQ9JLB4 3623 aa5.19□□□□□ -1.58
Smchd1-201ENSMUST00000127430 LystP97412 3788 aa5.17□□□□□ -1.58
Smchd1-201ENSMUST00000127430 Hspg2Q05793 3707 aaKnown RBP5.08□□□□□ -1.6
Smchd1-201ENSMUST00000127430 Helz2E9QAM5 2947 aaKnown RBP5.07□□□□□ -1.6
Smchd1-201ENSMUST00000127430 Celsr2Q9R0M0 2920 aa5.07□□□□□ -1.6
Smchd1-201ENSMUST00000127430 Gm17416Q30KP4 66 aa5.06□□□□□ -1.6
Smchd1-201ENSMUST00000127430 Pdzd2E9Q1M1 2796 aa5.06□□□□□ -1.6
Smchd1-201ENSMUST00000127430 Gm17402F6Z0L5 76 aa5.04□□□□□ -1.6
Smchd1-201ENSMUST00000127430 Gm9736A0A1W2P7N1 277 aa5.02□□□□□ -1.61
Smchd1-201ENSMUST00000127430 FlncQ8VHX6 2726 aaKnown RBP5.01□□□□□ -1.61
Smchd1-201ENSMUST00000127430 2210017I01RikA0A0A6YVV1 95 aa4.98□□□□□ -1.61
Smchd1-201ENSMUST00000127430 Xirp2Q4U4S6 3784 aa4.94□□□□□ -1.62
Smchd1-201ENSMUST00000127430 Nf1Q04690 2841 aa4.92□□□□□ -1.62
Smchd1-201ENSMUST00000127430 Tenm3Q9WTS6 2715 aa4.92□□□□□ -1.62
Smchd1-201ENSMUST00000127430 Crct1Q6PAI5 102 aa4.91□□□□□ -1.62
Smchd1-201ENSMUST00000127430 Tenm1Q9WTS4 2731 aa4.86□□□□□ -1.63
Smchd1-201ENSMUST00000127430 Gm6358A0A087WPH4 74 aa4.86□□□□□ -1.63
Smchd1-201ENSMUST00000127430 Ank2Q8C8R3 3898 aa4.83□□□□□ -1.64
Smchd1-201ENSMUST00000127430 Tenm4Q3UHK6 2771 aa4.83□□□□□ -1.64
Smchd1-201ENSMUST00000127430 Megf8P60882 2789 aa4.77□□□□□ -1.65
Smchd1-201ENSMUST00000127430 Gm11939A2A592 99 aa4.76□□□□□ -1.65
Smchd1-201ENSMUST00000127430 Gm19668J3QMD1 248 aa4.76□□□□□ -1.65
Smchd1-201ENSMUST00000127430 Gm18596A0A1W2P860 280 aa4.75□□□□□ -1.65
Smchd1-201ENSMUST00000127430 Krtap3-2Q9D638 99 aa4.7□□□□□ -1.66
Smchd1-201ENSMUST00000127430 Krtap3-3Q9D7P0 99 aa4.7□□□□□ -1.66
Smchd1-201ENSMUST00000127430 Tenm2Q9WTS5 2764 aa4.69□□□□□ -1.66
Smchd1-201ENSMUST00000127430 Krtap3-1A2A591 98 aa4.65□□□□□ -1.66
Smchd1-201ENSMUST00000127430 Fbn1Q61554 2873 aaKnown RBP4.64□□□□□ -1.67
Smchd1-201ENSMUST00000127430 OtogO55225 2910 aa4.64□□□□□ -1.67
Smchd1-201ENSMUST00000127430 Krtap13-1Q8K198 168 aa4.64□□□□□ -1.67
Smchd1-201ENSMUST00000127430 Gm19402J3QJV4 266 aa4.6□□□□□ -1.67
Smchd1-201ENSMUST00000127430 VwfQ8CIZ8 2813 aa4.54□□□□□ -1.68
Smchd1-201ENSMUST00000127430 Krtap7-1Q9D3I6 87 aa4.47□□□□□ -1.69
Smchd1-201ENSMUST00000127430 BsnO88737 3942 aa4.46□□□□□ -1.69
Smchd1-201ENSMUST00000127430 Krtap19-5O08632 62 aa4.45□□□□□ -1.7
Smchd1-201ENSMUST00000127430 Vps13bQ80TY5 3993 aa4.43□□□□□ -1.7
Smchd1-201ENSMUST00000127430 Col7a1Q63870 2944 aa4.38□□□□□ -1.71
Smchd1-201ENSMUST00000127430 Muc6Q80T03 2850 aa4.38□□□□□ -1.71
Smchd1-201ENSMUST00000127430 Sprr2a3Q4KL71 83 aa4.35□□□□□ -1.71
Smchd1-201ENSMUST00000127430 Sprr2a1Q9CQK8 83 aa4.35□□□□□ -1.71
Smchd1-201ENSMUST00000127430 Krtap1-5A2A590 122 aa4.25□□□□□ -1.73
Smchd1-201ENSMUST00000127430 Dnah6E9Q0B6 4144 aa4.16□□□□□ -1.74
Smchd1-201ENSMUST00000127430 Krtap19-9aF8WH65 55 aa4.14□□□□□ -1.75
Smchd1-201ENSMUST00000127430 Krtap19-9bQ99NG9 58 aa4.12□□□□□ -1.75
Smchd1-201ENSMUST00000127430 Krtap1-4Q3V2D6 188 aa4.11□□□□□ -1.75
Smchd1-201ENSMUST00000127430 Krtap12-1Q9Z287 130 aa4.1□□□□□ -1.75
Smchd1-201ENSMUST00000127430 Sprr2kO70562 68 aa4.1□□□□□ -1.75
Smchd1-201ENSMUST00000127430 Huwe1Q7TMY8 4377 aaKnown RBP4.07□□□□□ -1.76
Smchd1-201ENSMUST00000127430 Dnah7bL7N1Y0 4068 aa4.06□□□□□ -1.76
Smchd1-201ENSMUST00000127430 Krtap8-1O08633 61 aa3.99□□□□□ -1.77
Smchd1-201ENSMUST00000127430 Kmt2aP55200 3966 aa3.98□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms