RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Igfn1Q3KNY0 2849 aa9.01□□□□□ -0.97
Shroom3-201ENSMUST00000113051 Hivep1Q03172 2688 aa8.99□□□□□ -0.97
Shroom3-201ENSMUST00000113051 Utp20Q5XG71 2788 aaKnown RBP8.99□□□□□ -0.97
Shroom3-201ENSMUST00000113051 FrylF8VQ05 3007 aa8.95□□□□□ -0.98
Shroom3-201ENSMUST00000113051 A930033H14RikG5E8X6 103 aa8.95□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Myo15aQ9QZZ4 3511 aa8.95□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Gm9918Q8BUR5 174 aa8.94□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Dchs1E9PVD3 3291 aa8.93□□□□□ -0.98
Shroom3-201ENSMUST00000113051 FcgbpE9Q0B5 2583 aa8.93□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Gm9736A0A1W2P7N1 277 aa8.92□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Tnp1P10856 55 aa8.91□□□□□ -0.98
Shroom3-201ENSMUST00000113051 Dmxl2Q8BPN8 3032 aa8.88□□□□□ -0.99
Shroom3-201ENSMUST00000113051 Tex15F8VPN2 2785 aa8.85□□□□□ -0.99
Shroom3-201ENSMUST00000113051 VcanQ62059 3357 aa8.84□□□□□ -0.99
Shroom3-201ENSMUST00000113051 ApcQ61315 2845 aa8.83□□□□□ -1
Shroom3-201ENSMUST00000113051 Gm9112A2AI92 75 aa8.82□□□□□ -1
Shroom3-201ENSMUST00000113051 NbeaQ9EPN1 2936 aa8.82□□□□□ -1
Shroom3-201ENSMUST00000113051 Srrm2Q8BTI8 2703 aaKnown RBP8.82□□□□□ -1
Shroom3-201ENSMUST00000113051 Tenm4Q3UHK6 2771 aa8.81□□□□□ -1
Shroom3-201ENSMUST00000113051 Gm10318A0A1W2P728 225 aa8.8□□□□□ -1
Shroom3-201ENSMUST00000113051 Zzef1Q5SSH7 2924 aa8.78□□□□□ -1
Shroom3-201ENSMUST00000113051 SmcpP15265 143 aa8.75□□□□□ -1.01
Shroom3-201ENSMUST00000113051 SpegQ62407 3262 aa8.74□□□□□ -1.01
Shroom3-201ENSMUST00000113051 TgO08710 2766 aa8.72□□□□□ -1.01
Shroom3-201ENSMUST00000113051 DspE9Q557 2883 aaKnown RBP8.72□□□□□ -1.01
Shroom3-201ENSMUST00000113051 Vps13cQ8BX70 3748 aa8.71□□□□□ -1.01
Shroom3-201ENSMUST00000113051 Akap9Q70FJ1 3797 aa8.71□□□□□ -1.02
Shroom3-201ENSMUST00000113051 Wdfy3Q6VNB8 3508 aa8.68□□□□□ -1.02
Shroom3-201ENSMUST00000113051 Gm20537G3UYK7 97 aa8.62□□□□□ -1.03
Shroom3-201ENSMUST00000113051 B930094E09RikQ8C4T2 136 aa8.56□□□□□ -1.04
Shroom3-201ENSMUST00000113051 RelnQ60841 3461 aa8.56□□□□□ -1.04
Shroom3-201ENSMUST00000113051 Prm2P07978 107 aa8.55□□□□□ -1.04
Shroom3-201ENSMUST00000113051 LrbaQ9ESE1 2856 aa8.55□□□□□ -1.04
Shroom3-201ENSMUST00000113051 Celsr2Q9R0M0 2920 aa8.52□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Gm40193A0A1B0GT39 78 aa8.51□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Crct1Q6PAI5 102 aa8.5□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Trank1Q8BV79 2999 aa8.46□□□□□ -1.05
Shroom3-201ENSMUST00000113051 Muc5acE9QAQ8 3455 aa8.45□□□□□ -1.06
Shroom3-201ENSMUST00000113051 FlncQ8VHX6 2726 aaKnown RBP8.41□□□□□ -1.06
Shroom3-201ENSMUST00000113051 Pdzd2E9Q1M1 2796 aa8.4□□□□□ -1.06
Shroom3-201ENSMUST00000113051 Nf1Q04690 2841 aa8.4□□□□□ -1.06
Shroom3-201ENSMUST00000113051 DmdP11531 3678 aa8.39□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Csmd1Q923L3 3564 aa8.39□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Chd9Q8BYH8 2885 aa8.39□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Tenm2Q9WTS5 2764 aa8.37□□□□□ -1.07
Shroom3-201ENSMUST00000113051 Smg1Q8BKX6 3658 aaKnown RBP8.33□□□□□ -1.08
Shroom3-201ENSMUST00000113051 Tenm1Q9WTS4 2731 aa8.28□□□□□ -1.08
Shroom3-201ENSMUST00000113051 Tenm3Q9WTS6 2715 aa8.27□□□□□ -1.09
Shroom3-201ENSMUST00000113051 2310079G19RikQ9D6L6 185 aa8.24□□□□□ -1.09
Shroom3-201ENSMUST00000113051 Lama5Q61001 3718 aa8.14□□□□□ -1.11
Shroom3-201ENSMUST00000113051 Gm17416Q30KP4 66 aa8.13□□□□□ -1.11
Shroom3-201ENSMUST00000113051 4933428G20RikQ9D3X4 101 aa8.1□□□□□ -1.11
Shroom3-201ENSMUST00000113051 2210017I01RikA0A0A6YVV1 95 aa8.08□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Krtap19-5O08632 62 aa8.05□□□□□ -1.12
Shroom3-201ENSMUST00000113051 OtogO55225 2910 aa8.04□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Zfhx4Q9JJN2 3550 aa8.03□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Gm19668J3QMD1 248 aa8.03□□□□□ -1.12
Shroom3-201ENSMUST00000113051 Helz2E9QAM5 2947 aaKnown RBP7.97□□□□□ -1.13
Shroom3-201ENSMUST00000113051 Krtap13-1Q8K198 168 aa7.93□□□□□ -1.14
Shroom3-201ENSMUST00000113051 Cmya5Q70KF4 3739 aa7.91□□□□□ -1.14
Shroom3-201ENSMUST00000113051 SpenQ62504 3644 aaKnown RBP7.91□□□□□ -1.14
Shroom3-201ENSMUST00000113051 Megf8P60882 2789 aa7.87□□□□□ -1.15
Shroom3-201ENSMUST00000113051 Gm884A2A9H6 3643 aa7.87□□□□□ -1.15
Shroom3-201ENSMUST00000113051 VwfQ8CIZ8 2813 aa7.84□□□□□ -1.15
Shroom3-201ENSMUST00000113051 Gm6358A0A087WPH4 74 aa7.84□□□□□ -1.15
Shroom3-201ENSMUST00000113051 Gm17402F6Z0L5 76 aa7.81□□□□□ -1.16
Shroom3-201ENSMUST00000113051 Gm11939A2A592 99 aa7.79□□□□□ -1.16
Shroom3-201ENSMUST00000113051 Csmd2V9GX34 3611 aa7.79□□□□□ -1.16
Shroom3-201ENSMUST00000113051 Svep1A2AVA0 3567 aa7.76□□□□□ -1.17
Shroom3-201ENSMUST00000113051 Ank2Q8C8R3 3898 aa7.65□□□□□ -1.18
Shroom3-201ENSMUST00000113051 Fbn1Q61554 2873 aaKnown RBP7.62□□□□□ -1.19
Shroom3-201ENSMUST00000113051 Col7a1Q63870 2944 aa7.62□□□□□ -1.19
Shroom3-201ENSMUST00000113051 Gm18596A0A1W2P860 280 aa7.6□□□□□ -1.19
Shroom3-201ENSMUST00000113051 Sprr2kO70562 68 aa7.55□□□□□ -1.2
Shroom3-201ENSMUST00000113051 Krtap3-1A2A591 98 aa7.52□□□□□ -1.21
Shroom3-201ENSMUST00000113051 Huwe1Q7TMY8 4377 aaKnown RBP7.49□□□□□ -1.21
Shroom3-201ENSMUST00000113051 LorP18165 486 aa7.41□□□□□ -1.22
Shroom3-201ENSMUST00000113051 Muc4Q8JZM8 3443 aa7.4□□□□□ -1.22
Shroom3-201ENSMUST00000113051 Krtap8-1O08633 61 aa7.39□□□□□ -1.23
Shroom3-201ENSMUST00000113051 LystP97412 3788 aa7.37□□□□□ -1.23
Shroom3-201ENSMUST00000113051 Dnah14A0A140LIJ4 4489 aa7.34□□□□□ -1.23
Shroom3-201ENSMUST00000113051 Krtap3-2Q9D638 99 aa7.31□□□□□ -1.24
Shroom3-201ENSMUST00000113051 Krtap3-3Q9D7P0 99 aa7.31□□□□□ -1.24
Shroom3-201ENSMUST00000113051 Gm19402J3QJV4 266 aa7.29□□□□□ -1.24
Shroom3-201ENSMUST00000113051 Krtap7-1Q9D3I6 87 aa7.25□□□□□ -1.25
Shroom3-201ENSMUST00000113051 Krtap19-9aF8WH65 55 aa7.18□□□□□ -1.26
Shroom3-201ENSMUST00000113051 Csmd3Q80T79 3707 aa7.16□□□□□ -1.26
Shroom3-201ENSMUST00000113051 Dnah10D3YYQ8 4591 aa7.14□□□□□ -1.27
Shroom3-201ENSMUST00000113051 Muc6Q80T03 2850 aa7.14□□□□□ -1.27
Shroom3-201ENSMUST00000113051 Hspg2Q05793 3707 aaKnown RBP7.11□□□□□ -1.27
Shroom3-201ENSMUST00000113051 CubnQ9JLB4 3623 aa7.09□□□□□ -1.27
Shroom3-201ENSMUST00000113051 Sprr2gO70558 76 aa7.07□□□□□ -1.28
Shroom3-201ENSMUST00000113051 Krtap1-5A2A590 122 aa7.04□□□□□ -1.28
Shroom3-201ENSMUST00000113051 Krtap1-4Q3V2D6 188 aa7□□□□□ -1.29
Shroom3-201ENSMUST00000113051 BsnO88737 3942 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Dnah5Q8VHE6 4621 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Sprr2a3Q4KL71 83 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Sprr2a1Q9CQK8 83 aa6.92□□□□□ -1.3
Shroom3-201ENSMUST00000113051 Krtap19-9bQ99NG9 58 aa6.84□□□□□ -1.31
Shroom3-201ENSMUST00000113051 Krtap12-1Q9Z287 130 aa6.82□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 184.4 ms