RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Mki67E9PVX6 3177 aaKnown RBP3.22□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Myo15aQ9QZZ4 3511 aa3.21□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Gm5767A0A0J9YTU8 78 aa3.21□□□□□ -1.9
Scn1a-204ENSMUST00000112371 RelnQ60841 3461 aa3.2□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Lelp1Q9DAE3 120 aa3.2□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Muc5acE9QAQ8 3455 aa3.2□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Frem2Q6NVD0 3160 aa3.2□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Gm21887J3QQ04 176 aa3.19□□□□□ -1.9
Scn1a-204ENSMUST00000112371 OtogO55225 2910 aa3.18□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Tnp2P11378 117 aa3.18□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Gm7173A0A0G2JEB6 3132 aa3.17□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Gm3233E9Q2H5 230 aa3.17□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Csmd1Q923L3 3564 aa3.17□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Dchs1E9PVD3 3291 aa3.17□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Lrrc37aB1AWG4 3215 aa3.17□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Gm17416Q30KP4 66 aa3.16□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Dmxl2Q8BPN8 3032 aa3.16□□□□□ -1.9
Scn1a-204ENSMUST00000112371 Celsr3Q91ZI0 3301 aa3.15□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Tenm2Q9WTS5 2764 aa3.15□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Tnp1P10856 55 aa3.14□□□□□ -1.91
Scn1a-204ENSMUST00000112371 A030005K14RikA0A1Y7VNY1 122 aa3.14□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Zfhx4Q9JJN2 3550 aa3.13□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Spink7Q6IE32 76 aa3.13□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Gm19426M0QWC7 77 aa3.12□□□□□ -1.91
Scn1a-204ENSMUST00000112371 TrioQ0KL02 3102 aa3.12□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Krtap28-10A0A1Y7VP58 119 aa3.12□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Gm20537G3UYK7 97 aa3.12□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Gm7138L7N2C3 230 aa3.11□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Gm3238W4VSP7 230 aa3.11□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Rev3lQ61493 3122 aa3.11□□□□□ -1.91
Scn1a-204ENSMUST00000112371 A930033H14RikG5E8X6 103 aa3.1□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Helz2E9QAM5 2947 aaKnown RBP3.1□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Vps13cQ8BX70 3748 aa3.1□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Muc4Q8JZM8 3443 aa3.1□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Gm3880A0A1B0GSB3 72 aa3.1□□□□□ -1.91
Scn1a-204ENSMUST00000112371 Gm7137J3QMW1 236 aa3.09□□□□□ -1.92
Scn1a-204ENSMUST00000112371 2310050C09RikG5E8Z3 280 aa3.08□□□□□ -1.92
Scn1a-204ENSMUST00000112371 D6Ertd527eA0A0N4SWI3 464 aa3.08□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Lama1P19137 3084 aa3.08□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Cmya5Q70KF4 3739 aa3.07□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Wdfy4E9Q2M9 3149 aa3.07□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Ryr1E9PZQ0 5035 aa3.07□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Gm17349F7BGH6 99 aa3.07□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Zfhx3Q61329 3726 aa3.06□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Gm9112A2AI92 75 aa3.06□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Krtap15-1Q9QZU5 150 aa3.06□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Muc6Q80T03 2850 aa3.06□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Celsr1O35161 3034 aa3.05□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Lama5Q61001 3718 aa3.03□□□□□ -1.92
Scn1a-204ENSMUST00000112371 Smg1Q8BKX6 3658 aaKnown RBP3.01□□□□□ -1.93
Scn1a-204ENSMUST00000112371 Gm36176A0A1W2P8D5 158 aa3□□□□□ -1.93
Scn1a-204ENSMUST00000112371 2310061N02RikQ9D6S9 174 aa2.98□□□□□ -1.93
Scn1a-204ENSMUST00000112371 Col7a1Q63870 2944 aa2.98□□□□□ -1.93
Scn1a-204ENSMUST00000112371 Col12a1Q60847 3120 aa2.98□□□□□ -1.93
Scn1a-204ENSMUST00000112371 LystP97412 3788 aa2.96□□□□□ -1.94
Scn1a-204ENSMUST00000112371 Fbn1Q61554 2873 aaKnown RBP2.96□□□□□ -1.94
Scn1a-204ENSMUST00000112371 2310079G19RikQ9D6L6 185 aa2.96□□□□□ -1.94
Scn1a-204ENSMUST00000112371 Gm7544A0A1Y7VJ58 118 aa2.95□□□□□ -1.94
Scn1a-204ENSMUST00000112371 Prm2P07978 107 aa2.95□□□□□ -1.94
Scn1a-204ENSMUST00000112371 2210017I01RikA0A0A6YVV1 95 aa2.94□□□□□ -1.94
Scn1a-204ENSMUST00000112371 Adgrg4B7ZCC9 3073 aa2.92□□□□□ -1.94
Scn1a-204ENSMUST00000112371 A0A1Y7VJH8 109 aa2.92□□□□□ -1.94
Scn1a-204ENSMUST00000112371 Gm9508A0A1W2P7W0 230 aa2.92□□□□□ -1.94
Scn1a-204ENSMUST00000112371 B930094E09RikQ8C4T2 136 aa2.91□□□□□ -1.94
Scn1a-204ENSMUST00000112371 A030005L19RikA0A1Y7VIU2 113 aa2.9□□□□□ -1.94
Scn1a-204ENSMUST00000112371 Gm9507D3Z5T3 223 aa2.89□□□□□ -1.95
Scn1a-204ENSMUST00000112371 4933428G20RikQ9D3X4 101 aa2.89□□□□□ -1.95
Scn1a-204ENSMUST00000112371 Ryr2E9Q401 4966 aaKnown RBP2.88□□□□□ -1.95
Scn1a-204ENSMUST00000112371 Ank2Q8C8R3 3898 aa2.87□□□□□ -1.95
Scn1a-204ENSMUST00000112371 Krtap10-4Q08EG8 221 aa2.82□□□□□ -1.96
Scn1a-204ENSMUST00000112371 2310057N15RikQ9D6T8 200 aa2.82□□□□□ -1.96
Scn1a-204ENSMUST00000112371 Krtap28-13A0A087WQP5 138 aa2.81□□□□□ -1.96
Scn1a-204ENSMUST00000112371 Gm5965D3Z724 196 aa2.81□□□□□ -1.96
Scn1a-204ENSMUST00000112371 Dnah8Q91XQ0 4731 aa2.8□□□□□ -1.96
Scn1a-204ENSMUST00000112371 Krtap10-10A0A1W2P7T6 217 aa2.8□□□□□ -1.96
Scn1a-204ENSMUST00000112371 Birc6O88738 4882 aa2.77□□□□□ -1.97
Scn1a-204ENSMUST00000112371 HydinQ80W93 5154 aa2.75□□□□□ -1.97
Scn1a-204ENSMUST00000112371 Svep1A2AVA0 3567 aa2.75□□□□□ -1.97
Scn1a-204ENSMUST00000112371 Csmd2V9GX34 3611 aa2.75□□□□□ -1.97
Scn1a-204ENSMUST00000112371 Csmd3Q80T79 3707 aa2.75□□□□□ -1.97
Scn1a-204ENSMUST00000112371 Xirp2Q4U4S6 3784 aa2.74□□□□□ -1.97
Scn1a-204ENSMUST00000112371 Gm2696A0A1W2P709 240 aa2.74□□□□□ -1.97
Scn1a-204ENSMUST00000112371 Herc1E9PZP8 4859 aa2.73□□□□□ -1.97
Scn1a-204ENSMUST00000112371 PcloQ9QYX7 5068 aa2.72□□□□□ -1.97
Scn1a-204ENSMUST00000112371 PlecQ9QXS1 4691 aaKnown RBP2.72□□□□□ -1.97
Scn1a-204ENSMUST00000112371 Ryr3A2AGL3 4863 aa2.71□□□□□ -1.98
Scn1a-204ENSMUST00000112371 Dnhd1D3Z2X2 4750 aa2.71□□□□□ -1.98
Scn1a-204ENSMUST00000112371 Kiaa1109A2AAE1 5005 aa2.69□□□□□ -1.98
Scn1a-204ENSMUST00000112371 CubnQ9JLB4 3623 aa2.67□□□□□ -1.98
Scn1a-204ENSMUST00000112371 A0A1Y7VJ07 166 aa2.67□□□□□ -1.98
Scn1a-204ENSMUST00000112371 Hspg2Q05793 3707 aaKnown RBP2.66□□□□□ -1.98
Scn1a-204ENSMUST00000112371 Herc2Q4U2R1 4836 aa2.66□□□□□ -1.98
Scn1a-204ENSMUST00000112371 Dync1h1Q9JHU4 4644 aaKnown RBP2.65□□□□□ -1.99
Scn1a-204ENSMUST00000112371 BsnO88737 3942 aa2.61□□□□□ -1.99
Scn1a-204ENSMUST00000112371 Krtap3-2Q9D638 99 aa2.61□□□□□ -1.99
Scn1a-204ENSMUST00000112371 Krtap3-3Q9D7P0 99 aa2.61□□□□□ -1.99
Scn1a-204ENSMUST00000112371 Abca13Q5SSE9 5034 aa2.6□□□□□ -1.99
Scn1a-204ENSMUST00000112371 Gm9918Q8BUR5 174 aa2.59□□□□□ -1.99
Scn1a-204ENSMUST00000112371 Gm19668J3QMD1 248 aa2.59□□□□□ -2
Scn1a-204ENSMUST00000112371 Stard9Q80TF6 4561 aa2.58□□□□□ -2
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms