RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Ly6g6cQ9Z1Q4 126 aa4.64□□□□□ -1.67
Bdnf-207ENSMUST00000111047 A030014E15RikA0A1Y7VJV2 120 aa4.64□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Chtf8P0CG14 533 aa4.63□□□□□ -1.67
Bdnf-207ENSMUST00000111047 VwfQ8CIZ8 2813 aa4.63□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Gm6217A0A1Y7VJK9 128 aa4.63□□□□□ -1.67
Bdnf-207ENSMUST00000111047 6030445D17RikE9Q8F9 148 aa4.63□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Gm10065F6TJM2 114 aa4.62□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Gm17349F7BGH6 99 aa4.62□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Anapc11Q9CPX9 84 aa4.6□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Ndufb1P0DN34 57 aa4.6□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Ndufs5Q99LY9 106 aa4.6□□□□□ -1.67
Bdnf-207ENSMUST00000111047 Defb39Q70KL3 74 aa4.59□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Cypt14J3QPF7 87 aa4.57□□□□□ -1.68
Bdnf-207ENSMUST00000111047 NbdyA0A0N4SUI7 68 aa4.56□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Wfdc3Q14AE4 130 aa4.56□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Gm20661K7N787 53 aa4.56□□□□□ -1.68
Bdnf-207ENSMUST00000111047 2310034C09RikQ9D746 214 aa4.56□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Defb11Q8R2I7 77 aa4.55□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Sec61bQ9CQS8 96 aaKnown RBP4.55□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Gm2310J3QNJ2 377 aa4.54□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Spaca4Q80ZQ0 127 aa4.54□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Gm12216A0A1W2P827 62 aa4.54□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Krtap29-1A2A5X4 342 aa4.53□□□□□ -1.68
Bdnf-207ENSMUST00000111047 Gpr15lA0A0B4J1N3 78 aa4.52□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Cypt15B1AXS0 87 aa4.52□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Gm16253D3Z167 63 aa4.51□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Csmd3Q80T79 3707 aa4.5□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Gm9507D3Z5T3 223 aa4.5□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Gm10999F6Q4M4 69 aa4.49□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Limd2Q8BGB5 128 aa4.49□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Muc6Q80T03 2850 aa4.48□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Gm11563B1AQ90 168 aa4.48□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Krtap4-7Q9D732 168 aa4.48□□□□□ -1.69
Bdnf-207ENSMUST00000111047 A0A286YCP9 139 aa4.47□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Gm11555B1AQ89 175 aa4.47□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Tenm2Q9WTS5 2764 aa4.47□□□□□ -1.69
Bdnf-207ENSMUST00000111047 Dnah14A0A140LIJ4 4489 aa4.46□□□□□ -1.7
Bdnf-207ENSMUST00000111047 FcgbpE9Q0B5 2583 aa4.45□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Gm21798J3QNU5 87 aa4.44□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Q8BGJ3 129 aa4.44□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Uqcr11Q9CPX8 56 aa4.43□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Krtap14O08640 167 aa4.43□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Mp68P56379 58 aa4.43□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Megf8P60882 2789 aa4.42□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Dnah10D3YYQ8 4591 aa4.42□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Tnp2P11378 117 aa4.42□□□□□ -1.7
Bdnf-207ENSMUST00000111047 Gm20538F6Z9R1 75 aa4.39□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Defb1P56386 69 aa4.39□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Krtap10-4Q08EG8 221 aa4.39□□□□□ -1.71
Bdnf-207ENSMUST00000111047 4930507D05RikQ8C9C9 103 aa4.37□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Dnah7bL7N1Y0 4068 aa4.37□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Krtap13O88375 197 aa4.37□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Dnah17Q69Z23 4481 aa4.36□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Gm11939A2A592 99 aa4.36□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Dnah6E9Q0B6 4144 aa4.35□□□□□ -1.71
Bdnf-207ENSMUST00000111047 RetnlbQ99P86 105 aa4.34□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Prm2P07978 107 aa4.34□□□□□ -1.71
Bdnf-207ENSMUST00000111047 Dnah3Q8BW94 4083 aa4.34□□□□□ -1.72
Bdnf-207ENSMUST00000111047 Kmt2aP55200 3966 aa4.33□□□□□ -1.72
Bdnf-207ENSMUST00000111047 Huwe1Q7TMY8 4377 aaKnown RBP4.28□□□□□ -1.72
Bdnf-207ENSMUST00000111047 Krtap10-10A0A1W2P7T6 217 aa4.27□□□□□ -1.73
Bdnf-207ENSMUST00000111047 Gm9918Q8BUR5 174 aa4.27□□□□□ -1.73
Bdnf-207ENSMUST00000111047 Pla2g10Q9QXX3 151 aa4.26□□□□□ -1.73
Bdnf-207ENSMUST00000111047 Gm4491E0CX42 125 aa4.25□□□□□ -1.73
Bdnf-207ENSMUST00000111047 Romo1P60603 79 aa4.25□□□□□ -1.73
Bdnf-207ENSMUST00000111047 Dnah11E9Q7N9 4488 aa4.23□□□□□ -1.73
Bdnf-207ENSMUST00000111047 TnxbO35452 4006 aa4.23□□□□□ -1.73
Bdnf-207ENSMUST00000111047 Gm2696A0A1W2P709 240 aa4.23□□□□□ -1.73
Bdnf-207ENSMUST00000111047 Dnah1E9Q8T7 4250 aa4.21□□□□□ -1.73
Bdnf-207ENSMUST00000111047 PlecQ9QXS1 4691 aaKnown RBP4.2□□□□□ -1.74
Bdnf-207ENSMUST00000111047 CriptO70333 101 aa4.19□□□□□ -1.74
Bdnf-207ENSMUST00000111047 Dnah9B1AR51 4484 aa4.18□□□□□ -1.74
Bdnf-207ENSMUST00000111047 Gm17606F6ZL36 78 aa4.17□□□□□ -1.74
Bdnf-207ENSMUST00000111047 Rps29P62274 56 aa4.16□□□□□ -1.74
Bdnf-207ENSMUST00000111047 Fras1Q80T14 4010 aa4.16□□□□□ -1.74
Bdnf-207ENSMUST00000111047 D6Ertd527eA0A0N4SWI3 464 aa4.15□□□□□ -1.74
Bdnf-207ENSMUST00000111047 2310079G19RikQ9D6L6 185 aa4.15□□□□□ -1.75
Bdnf-207ENSMUST00000111047 Gm3880A0A1B0GSB3 72 aa4.13□□□□□ -1.75
Bdnf-207ENSMUST00000111047 PrkdcP97313 4128 aa4.12□□□□□ -1.75
Bdnf-207ENSMUST00000111047 A930033H14RikG5E8X6 103 aa4.12□□□□□ -1.75
Bdnf-207ENSMUST00000111047 Rnase13Q5GAM7 153 aa4.11□□□□□ -1.75
Bdnf-207ENSMUST00000111047 Gm5767A0A0J9YTU8 78 aa4.1□□□□□ -1.75
Bdnf-207ENSMUST00000111047 Krtap4-2B1AQ85 167 aa4.1□□□□□ -1.75
Bdnf-207ENSMUST00000111047 Cox6b2Q80ZN9 88 aa4.08□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Dnah5Q8VHE6 4621 aa4.08□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Dync2h1Q45VK7 4306 aa4.08□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Dnah7aE9Q0T8 4024 aa4.06□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Gm9955Q8CEJ8 102 aa4.06□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Krtap3-2Q9D638 99 aa4.06□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Krtap3-3Q9D7P0 99 aa4.06□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Vps13dB1ART2 4390 aa4.06□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Krtap15-1Q9QZU5 150 aa4.05□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Ndufaf8A2AMZ4 74 aa4.04□□□□□ -1.76
Bdnf-207ENSMUST00000111047 Gm20537G3UYK7 97 aa4.02□□□□□ -1.77
Bdnf-207ENSMUST00000111047 Dnah7cA0A087WR13 4024 aa4□□□□□ -1.77
Bdnf-207ENSMUST00000111047 Lrp1bQ9JI18 4599 aa4□□□□□ -1.77
Bdnf-207ENSMUST00000111047 2210017I01RikA0A0A6YVV1 95 aa4□□□□□ -1.77
Bdnf-207ENSMUST00000111047 Dnah2P0C6F1 4456 aa3.99□□□□□ -1.77
Bdnf-207ENSMUST00000111047 Lce1mQ9CR91 182 aa3.97□□□□□ -1.77
Bdnf-207ENSMUST00000111047 Gm10382Q3V0T5 144 aa3.96□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms