RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 SvipQ3UZP4 77 aa6.46□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 Gm29423A0A087WRM1 55 aa6.45□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 CenpwQ3URR0 86 aa6.45□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 Vps25Q9CQ80 176 aa6.45□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 Ighv10-3A0A075B5T6 119 aa6.43□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 Krtap4-2B1AQ85 167 aa6.43□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 Smim13E9Q942 88 aa6.43□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 C130032M10RikQ8C888 123 aa6.4□□□□□ -1.38
Ccdc28b-202ENSMUST00000106035 Sprr2jO70561 109 aa6.39□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Ube2v1Q9CZY3 147 aa6.39□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Acyp1P56376 99 aa6.38□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Cox6cQ9CPQ1 76 aa6.38□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Cby1Q9D1C2 127 aa6.38□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Fam229aB2KGE5 128 aa6.37□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Gm20604F8WIA3 75 aa6.37□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Gm28051J3QMA2 81 aa6.37□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Gm10318A0A1W2P728 225 aa6.35□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Gm44790A0A0N4SV91 103 aa6.34□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Igkv3-3A0A140T8Q0 119 aa6.34□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 7530416G11RikJ3QJX6 159 aa6.34□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Tmem213Q08EA8 116 aa6.34□□□□□ -1.39
Ccdc28b-202ENSMUST00000106035 Igkv8-27A0A0G2JF28 120 aa6.33□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Ccl17F6R5P4 103 aa6.33□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Lce1gQ9D195 139 aa6.33□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Rbm3O89086 153 aaKnown RBP6.32□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Igkv8-19A0A0G2JFN8 121 aa6.31□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 SspoQ8CG65 4998 aa6.3□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Trav14d-3-dv8A0A075B619 120 aa6.3□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Gm10135F6TEE5 83 aa6.3□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Rnase13Q5GAM7 153 aa6.3□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 UqcrqQ9CQ69 82 aa6.3□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Defa21Q8C1P2 93 aa6.29□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Gm37013Q8K491 104 aa6.29□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Cox7cP17665 63 aa6.28□□□□□ -1.4
Ccdc28b-202ENSMUST00000106035 Scgb1b2O35176 93 aa6.26□□□□□ -1.41
Ccdc28b-202ENSMUST00000106035 Pde6gP09174 87 aa6.26□□□□□ -1.41
Ccdc28b-202ENSMUST00000106035 Bud31Q6PGH1 103 aa6.26□□□□□ -1.41
Ccdc28b-202ENSMUST00000106035 Mrpl34Q99N91 92 aa6.26□□□□□ -1.41
Ccdc28b-202ENSMUST00000106035 Apoc4Q61268 124 aa6.24□□□□□ -1.41
Ccdc28b-202ENSMUST00000106035 Q9DAA3 117 aa6.24□□□□□ -1.41
Ccdc28b-202ENSMUST00000106035 BikO70337 150 aa6.23□□□□□ -1.41
Ccdc28b-202ENSMUST00000106035 Gm17416Q30KP4 66 aa6.2□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Reg3aO09037 175 aa6.19□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 NrepQ07475 68 aa6.19□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Spink13Q3UTS8 97 aa6.19□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Chtf8P0CG14 533 aa6.18□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Defb13Q8R2I4 64 aa6.18□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Krtap3-2Q9D638 99 aa6.17□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Krtap3-3Q9D7P0 99 aa6.17□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Gm10267M0QWD8 85 aa6.15□□□□□ -1.42
Ccdc28b-202ENSMUST00000106035 Syne2Q6ZWQ0 6874 aaKnown RBP6.14□□□□□ -1.43
Ccdc28b-202ENSMUST00000106035 Gm28539A0A087WSL9 92 aa6.14□□□□□ -1.43
Ccdc28b-202ENSMUST00000106035 Pcp4P63054 62 aa6.12□□□□□ -1.43
Ccdc28b-202ENSMUST00000106035 BtcQ05928 177 aa6.11□□□□□ -1.43
Ccdc28b-202ENSMUST00000106035 Gm11596B1AQB0 205 aa6.06□□□□□ -1.44
Ccdc28b-202ENSMUST00000106035 B930094E09RikQ8C4T2 136 aa6.06□□□□□ -1.44
Ccdc28b-202ENSMUST00000106035 MturnQ8CGA4 131 aa6.06□□□□□ -1.44
Ccdc28b-202ENSMUST00000106035 Lyrm7Q9DA03 104 aa6.06□□□□□ -1.44
Ccdc28b-202ENSMUST00000106035 Ormdl1Q921I0 153 aa6.05□□□□□ -1.44
Ccdc28b-202ENSMUST00000106035 Krtap13-1Q8K198 168 aa6.04□□□□□ -1.44
Ccdc28b-202ENSMUST00000106035 Gm11027G8JL69 66 aa6.02□□□□□ -1.45
Ccdc28b-202ENSMUST00000106035 Gm4491E0CX42 125 aa6□□□□□ -1.45
Ccdc28b-202ENSMUST00000106035 Xcl1P47993 114 aa6□□□□□ -1.45
Ccdc28b-202ENSMUST00000106035 Krtap1-5A2A590 122 aa5.98□□□□□ -1.45
Ccdc28b-202ENSMUST00000106035 A0A1Y7VJH8 109 aa5.97□□□□□ -1.45
Ccdc28b-202ENSMUST00000106035 Muc5bE9Q5I3 4800 aa5.96□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 Krtap4-6Q3V4B7 195 aa5.95□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 Naa38Q9D2U5 125 aa5.95□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 Tax1bp3Q9DBG9 124 aa5.95□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 Lce1jD3YUU5 139 aa5.94□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 Gm26602M0QWA4 95 aa5.94□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 2210017I01RikA0A0A6YVV1 95 aa5.93□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 MplkipQ9D011 178 aa5.91□□□□□ -1.46
Ccdc28b-202ENSMUST00000106035 9230102O04RikA2ASX7 82 aa5.89□□□□□ -1.47
Ccdc28b-202ENSMUST00000106035 Ubl5Q9EPV8 73 aa5.89□□□□□ -1.47
Ccdc28b-202ENSMUST00000106035 Fam229bQ8CF36 80 aa5.88□□□□□ -1.47
Ccdc28b-202ENSMUST00000106035 Krtap19-2Q925I0 141 aa5.88□□□□□ -1.47
Ccdc28b-202ENSMUST00000106035 Krtap9-5A2A5X3 358 aa5.87□□□□□ -1.47
Ccdc28b-202ENSMUST00000106035 Gm26920S4R2A5 56 aa5.86□□□□□ -1.47
Ccdc28b-202ENSMUST00000106035 Trav3-1Q5R1I8 114 aa5.84□□□□□ -1.47
Ccdc28b-202ENSMUST00000106035 Mdn1A2ANY6 5589 aaKnown RBP5.83□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 A0A286YCQ8 80 aa5.82□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 2310079G19RikQ9D6L6 185 aa5.82□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 Samd13D3YUG0 102 aa5.8□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 A0A1Y7VLE6 161 aa5.79□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 A0A286YE49 62 aa5.79□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 Mtatp8P03930 67 aa5.79□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 Tmem254aP0DN89 123 aa5.79□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 Tmem254bP0DN90 123 aa5.79□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 Tmem254cP0DN91 123 aa5.79□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 Prr15lQ8JZM2 100 aa5.78□□□□□ -1.48
Ccdc28b-202ENSMUST00000106035 Krtap28-10A0A1Y7VP58 119 aa5.76□□□□□ -1.49
Ccdc28b-202ENSMUST00000106035 Q8BGJ3 129 aa5.75□□□□□ -1.49
Ccdc28b-202ENSMUST00000106035 Krtap12-1Q9Z287 130 aa5.75□□□□□ -1.49
Ccdc28b-202ENSMUST00000106035 Krtap28-13A0A087WQP5 138 aa5.74□□□□□ -1.49
Ccdc28b-202ENSMUST00000106035 Gm11564A2A4L9 201 aa5.73□□□□□ -1.49
Ccdc28b-202ENSMUST00000106035 Gm11595B1AQA7 289 aa5.73□□□□□ -1.49
Ccdc28b-202ENSMUST00000106035 Krtap4-8B1AQA8 209 aa5.73□□□□□ -1.49
Ccdc28b-202ENSMUST00000106035 Gm10999F6Q4M4 69 aa5.7□□□□□ -1.5
Ccdc28b-202ENSMUST00000106035 Gm19426M0QWC7 77 aa5.7□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms