RNA–Protein interactions for RNA: ENSMUST00000103005.9

Shroom4-202, Transcript of Protein Shroom4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shroom4, Length 4,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4-202ENSMUST00000103005 Csmd1Q923L3 3564 aa9.72□□□□□ -0.85
Shroom4-202ENSMUST00000103005 Akap9Q70FJ1 3797 aa9.71□□□□□ -0.85
Shroom4-202ENSMUST00000103005 OxtP35454 125 aa9.7□□□□□ -0.86
Shroom4-202ENSMUST00000103005 Zfhx3Q61329 3726 aa9.7□□□□□ -0.86
Shroom4-202ENSMUST00000103005 2310050C09RikG5E8Z3 280 aa9.7□□□□□ -0.86
Shroom4-202ENSMUST00000103005 FcgbpE9Q0B5 2583 aa9.69□□□□□ -0.86
Shroom4-202ENSMUST00000103005 Pla2g10Q9QXX3 151 aa9.68□□□□□ -0.86
Shroom4-202ENSMUST00000103005 SpenQ62504 3644 aaKnown RBP9.66□□□□□ -0.86
Shroom4-202ENSMUST00000103005 Vps13cQ8BX70 3748 aa9.64□□□□□ -0.87
Shroom4-202ENSMUST00000103005 Krtap14O08640 167 aa9.62□□□□□ -0.87
Shroom4-202ENSMUST00000103005 Rpl37Q9D823 97 aa9.6□□□□□ -0.87
Shroom4-202ENSMUST00000103005 Romo1P60603 79 aa9.56□□□□□ -0.88
Shroom4-202ENSMUST00000103005 Gm9507D3Z5T3 223 aa9.56□□□□□ -0.88
Shroom4-202ENSMUST00000103005 Gm20538F6Z9R1 75 aa9.56□□□□□ -0.88
Shroom4-202ENSMUST00000103005 Krtap15-1Q9QZU5 150 aa9.54□□□□□ -0.88
Shroom4-202ENSMUST00000103005 Muc5acE9QAQ8 3455 aa9.52□□□□□ -0.89
Shroom4-202ENSMUST00000103005 Gm10382Q3V0T5 144 aa9.48□□□□□ -0.89
Shroom4-202ENSMUST00000103005 Smg1Q8BKX6 3658 aaKnown RBP9.48□□□□□ -0.89
Shroom4-202ENSMUST00000103005 Tnp2P11378 117 aa9.47□□□□□ -0.89
Shroom4-202ENSMUST00000103005 Krtap10-4Q08EG8 221 aa9.45□□□□□ -0.9
Shroom4-202ENSMUST00000103005 Gm5767A0A0J9YTU8 78 aa9.41□□□□□ -0.9
Shroom4-202ENSMUST00000103005 Spink7Q6IE32 76 aa9.41□□□□□ -0.9
Shroom4-202ENSMUST00000103005 Cox6b2Q80ZN9 88 aa9.41□□□□□ -0.9
Shroom4-202ENSMUST00000103005 D6Ertd527eA0A0N4SWI3 464 aa9.4□□□□□ -0.9
Shroom4-202ENSMUST00000103005 Tenm4Q3UHK6 2771 aa9.34□□□□□ -0.92
Shroom4-202ENSMUST00000103005 Krtap10-10A0A1W2P7T6 217 aa9.26□□□□□ -0.93
Shroom4-202ENSMUST00000103005 OtogO55225 2910 aa9.24□□□□□ -0.93
Shroom4-202ENSMUST00000103005 Zfhx4Q9JJN2 3550 aa9.23□□□□□ -0.93
Shroom4-202ENSMUST00000103005 Tenm1Q9WTS4 2731 aa9.21□□□□□ -0.94
Shroom4-202ENSMUST00000103005 Rps29P62274 56 aa9.21□□□□□ -0.94
Shroom4-202ENSMUST00000103005 BC029722A0A0N4SW31 51 aa9.2□□□□□ -0.94
Shroom4-202ENSMUST00000103005 Lama5Q61001 3718 aa9.2□□□□□ -0.94
Shroom4-202ENSMUST00000103005 Gm19426M0QWC7 77 aa9.18□□□□□ -0.94
Shroom4-202ENSMUST00000103005 Camk2n1Q6QWF9 78 aa9.13□□□□□ -0.95
Shroom4-202ENSMUST00000103005 Fam229aB2KGE5 128 aa9.12□□□□□ -0.95
Shroom4-202ENSMUST00000103005 Gm884A2A9H6 3643 aa9.11□□□□□ -0.95
Shroom4-202ENSMUST00000103005 Gm20537G3UYK7 97 aa9.08□□□□□ -0.96
Shroom4-202ENSMUST00000103005 Ndufaf8A2AMZ4 74 aa9.05□□□□□ -0.96
Shroom4-202ENSMUST00000103005 Gm2696A0A1W2P709 240 aa9.03□□□□□ -0.96
Shroom4-202ENSMUST00000103005 2310079G19RikQ9D6L6 185 aa9.01□□□□□ -0.97
Shroom4-202ENSMUST00000103005 Muc4Q8JZM8 3443 aa9□□□□□ -0.97
Shroom4-202ENSMUST00000103005 Sec61bQ9CQS8 96 aaKnown RBP8.97□□□□□ -0.97
Shroom4-202ENSMUST00000103005 Svep1A2AVA0 3567 aa8.96□□□□□ -0.98
Shroom4-202ENSMUST00000103005 Cmya5Q70KF4 3739 aa8.95□□□□□ -0.98
Shroom4-202ENSMUST00000103005 A930033H14RikG5E8X6 103 aa8.93□□□□□ -0.98
Shroom4-202ENSMUST00000103005 Gm21887J3QQ04 176 aa8.88□□□□□ -0.99
Shroom4-202ENSMUST00000103005 VwfQ8CIZ8 2813 aa8.86□□□□□ -0.99
Shroom4-202ENSMUST00000103005 Tenm2Q9WTS5 2764 aa8.83□□□□□ -1
Shroom4-202ENSMUST00000103005 Fbn1Q61554 2873 aaKnown RBP8.83□□□□□ -1
Shroom4-202ENSMUST00000103005 Megf8P60882 2789 aa8.78□□□□□ -1
Shroom4-202ENSMUST00000103005 Gm5965D3Z724 196 aa8.77□□□□□ -1.01
Shroom4-202ENSMUST00000103005 Gm9112A2AI92 75 aa8.65□□□□□ -1.02
Shroom4-202ENSMUST00000103005 Prm2P07978 107 aa8.63□□□□□ -1.03
Shroom4-202ENSMUST00000103005 Gm40193A0A1B0GT39 78 aa8.6□□□□□ -1.03
Shroom4-202ENSMUST00000103005 B930094E09RikQ8C4T2 136 aa8.57□□□□□ -1.04
Shroom4-202ENSMUST00000103005 Col7a1Q63870 2944 aa8.53□□□□□ -1.04
Shroom4-202ENSMUST00000103005 Csmd2V9GX34 3611 aa8.45□□□□□ -1.06
Shroom4-202ENSMUST00000103005 2310057N15RikQ9D6T8 200 aa8.43□□□□□ -1.06
Shroom4-202ENSMUST00000103005 Gm17416Q30KP4 66 aa8.42□□□□□ -1.06
Shroom4-202ENSMUST00000103005 Gm11939A2A592 99 aa8.38□□□□□ -1.07
Shroom4-202ENSMUST00000103005 Krtap3-2Q9D638 99 aa8.37□□□□□ -1.07
Shroom4-202ENSMUST00000103005 Krtap3-3Q9D7P0 99 aa8.37□□□□□ -1.07
Shroom4-202ENSMUST00000103005 Muc6Q80T03 2850 aa8.35□□□□□ -1.07
Shroom4-202ENSMUST00000103005 Tnp1P10856 55 aa8.33□□□□□ -1.08
Shroom4-202ENSMUST00000103005 LystP97412 3788 aa8.32□□□□□ -1.08
Shroom4-202ENSMUST00000103005 CubnQ9JLB4 3623 aa8.31□□□□□ -1.08
Shroom4-202ENSMUST00000103005 Gm9736A0A1W2P7N1 277 aa8.31□□□□□ -1.08
Shroom4-202ENSMUST00000103005 2210017I01RikA0A0A6YVV1 95 aa8.31□□□□□ -1.08
Shroom4-202ENSMUST00000103005 Ank2Q8C8R3 3898 aa8.25□□□□□ -1.09
Shroom4-202ENSMUST00000103005 Gm9918Q8BUR5 174 aa8.23□□□□□ -1.09
Shroom4-202ENSMUST00000103005 Gm17402F6Z0L5 76 aa8.13□□□□□ -1.11
Shroom4-202ENSMUST00000103005 Krtap3-1A2A591 98 aa7.98□□□□□ -1.13
Shroom4-202ENSMUST00000103005 Dnah14A0A140LIJ4 4489 aa7.92□□□□□ -1.14
Shroom4-202ENSMUST00000103005 Krtap13-1Q8K198 168 aa7.9□□□□□ -1.15
Shroom4-202ENSMUST00000103005 Krtap19-5O08632 62 aa7.9□□□□□ -1.15
Shroom4-202ENSMUST00000103005 Xirp2Q4U4S6 3784 aa7.8□□□□□ -1.16
Shroom4-202ENSMUST00000103005 Csmd3Q80T79 3707 aa7.8□□□□□ -1.16
Shroom4-202ENSMUST00000103005 Gm10318A0A1W2P728 225 aa7.77□□□□□ -1.17
Shroom4-202ENSMUST00000103005 Dnah10D3YYQ8 4591 aa7.75□□□□□ -1.17
Shroom4-202ENSMUST00000103005 Hspg2Q05793 3707 aaKnown RBP7.75□□□□□ -1.17
Shroom4-202ENSMUST00000103005 Gm19668J3QMD1 248 aa7.69□□□□□ -1.18
Shroom4-202ENSMUST00000103005 Huwe1Q7TMY8 4377 aaKnown RBP7.6□□□□□ -1.19
Shroom4-202ENSMUST00000103005 BsnO88737 3942 aa7.58□□□□□ -1.2
Shroom4-202ENSMUST00000103005 Crct1Q6PAI5 102 aa7.57□□□□□ -1.2
Shroom4-202ENSMUST00000103005 Krtap7-1Q9D3I6 87 aa7.57□□□□□ -1.2
Shroom4-202ENSMUST00000103005 Dnah5Q8VHE6 4621 aa7.56□□□□□ -1.2
Shroom4-202ENSMUST00000103005 Dnah17Q69Z23 4481 aa7.51□□□□□ -1.21
Shroom4-202ENSMUST00000103005 Stard9Q80TF6 4561 aa7.4□□□□□ -1.22
Shroom4-202ENSMUST00000103005 Dnah7bL7N1Y0 4068 aa7.39□□□□□ -1.23
Shroom4-202ENSMUST00000103005 PlecQ9QXS1 4691 aaKnown RBP7.38□□□□□ -1.23
Shroom4-202ENSMUST00000103005 Vps13dB1ART2 4390 aa7.38□□□□□ -1.23
Shroom4-202ENSMUST00000103005 Dnah11E9Q7N9 4488 aa7.37□□□□□ -1.23
Shroom4-202ENSMUST00000103005 Sprr2a3Q4KL71 83 aa7.37□□□□□ -1.23
Shroom4-202ENSMUST00000103005 Sprr2a1Q9CQK8 83 aa7.37□□□□□ -1.23
Shroom4-202ENSMUST00000103005 Krtap1-5A2A590 122 aa7.3□□□□□ -1.24
Shroom4-202ENSMUST00000103005 Dnah9B1AR51 4484 aa7.29□□□□□ -1.24
Shroom4-202ENSMUST00000103005 Gm19402J3QJV4 266 aa7.25□□□□□ -1.25
Shroom4-202ENSMUST00000103005 4933428G20RikQ9D3X4 101 aa7.25□□□□□ -1.25
Shroom4-202ENSMUST00000103005 Lrp1bQ9JI18 4599 aa7.17□□□□□ -1.26
Shroom4-202ENSMUST00000103005 ApobE9Q414 4505 aa7.16□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 103.4 ms