RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Gm20537G3UYK7 97 aa3.39□□□□□ -1.87
Ubr4-201ENSMUST00000097822 Srrm2Q8BTI8 2703 aaKnown RBP3.36□□□□□ -1.87
Ubr4-201ENSMUST00000097822 Hivep1Q03172 2688 aa3.36□□□□□ -1.87
Ubr4-201ENSMUST00000097822 Gm17349F7BGH6 99 aa3.35□□□□□ -1.87
Ubr4-201ENSMUST00000097822 BC029722A0A0N4SW31 51 aa3.34□□□□□ -1.87
Ubr4-201ENSMUST00000097822 Zzef1Q5SSH7 2924 aa3.33□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Myo15aQ9QZZ4 3511 aa3.32□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Gm5767A0A0J9YTU8 78 aa3.32□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Gm21887J3QQ04 176 aa3.31□□□□□ -1.88
Ubr4-201ENSMUST00000097822 FcgbpE9Q0B5 2583 aa3.31□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Gm36176A0A1W2P8D5 158 aa3.3□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Gm5965D3Z724 196 aa3.29□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Celsr2Q9R0M0 2920 aa3.29□□□□□ -1.88
Ubr4-201ENSMUST00000097822 2310061N02RikQ9D6S9 174 aa3.29□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Muc2Q80Z19 2680 aa3.29□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Gm40193A0A1B0GT39 78 aa3.29□□□□□ -1.88
Ubr4-201ENSMUST00000097822 Tnp2P11378 117 aa3.27□□□□□ -1.89
Ubr4-201ENSMUST00000097822 RelnQ60841 3461 aa3.26□□□□□ -1.89
Ubr4-201ENSMUST00000097822 2310079G19RikQ9D6L6 185 aa3.26□□□□□ -1.89
Ubr4-201ENSMUST00000097822 Zfhx3Q61329 3726 aa3.26□□□□□ -1.89
Ubr4-201ENSMUST00000097822 DmdP11531 3678 aa3.25□□□□□ -1.89
Ubr4-201ENSMUST00000097822 Akap9Q70FJ1 3797 aa3.25□□□□□ -1.89
Ubr4-201ENSMUST00000097822 2310057N15RikQ9D6T8 200 aa3.25□□□□□ -1.89
Ubr4-201ENSMUST00000097822 Csmd1Q923L3 3564 aa3.24□□□□□ -1.89
Ubr4-201ENSMUST00000097822 Chd9Q8BYH8 2885 aa3.24□□□□□ -1.89
Ubr4-201ENSMUST00000097822 Rps29P62274 56 aa3.22□□□□□ -1.89
Ubr4-201ENSMUST00000097822 Helz2E9QAM5 2947 aaKnown RBP3.21□□□□□ -1.9
Ubr4-201ENSMUST00000097822 Gm9507D3Z5T3 223 aa3.21□□□□□ -1.9
Ubr4-201ENSMUST00000097822 LrbaQ9ESE1 2856 aa3.21□□□□□ -1.9
Ubr4-201ENSMUST00000097822 FlncQ8VHX6 2726 aaKnown RBP3.2□□□□□ -1.9
Ubr4-201ENSMUST00000097822 Nf1Q04690 2841 aa3.2□□□□□ -1.9
Ubr4-201ENSMUST00000097822 SpenQ62504 3644 aaKnown RBP3.19□□□□□ -1.9
Ubr4-201ENSMUST00000097822 A930033H14RikG5E8X6 103 aa3.19□□□□□ -1.9
Ubr4-201ENSMUST00000097822 Itpr2Q9Z329 2701 aa3.19□□□□□ -1.9
Ubr4-201ENSMUST00000097822 Krtap10-4Q08EG8 221 aa3.18□□□□□ -1.9
Ubr4-201ENSMUST00000097822 Zfhx4Q9JJN2 3550 aa3.18□□□□□ -1.9
Ubr4-201ENSMUST00000097822 B930094E09RikQ8C4T2 136 aa3.16□□□□□ -1.9
Ubr4-201ENSMUST00000097822 Pdzd2E9Q1M1 2796 aa3.16□□□□□ -1.9
Ubr4-201ENSMUST00000097822 Tnp1P10856 55 aa3.14□□□□□ -1.91
Ubr4-201ENSMUST00000097822 Krtap10-10A0A1W2P7T6 217 aa3.12□□□□□ -1.91
Ubr4-201ENSMUST00000097822 Muc5acE9QAQ8 3455 aa3.12□□□□□ -1.91
Ubr4-201ENSMUST00000097822 Vps13cQ8BX70 3748 aa3.12□□□□□ -1.91
Ubr4-201ENSMUST00000097822 Tenm3Q9WTS6 2715 aa3.11□□□□□ -1.91
Ubr4-201ENSMUST00000097822 OtogO55225 2910 aa3.11□□□□□ -1.91
Ubr4-201ENSMUST00000097822 Gm884A2A9H6 3643 aa3.1□□□□□ -1.91
Ubr4-201ENSMUST00000097822 Smg1Q8BKX6 3658 aaKnown RBP3.1□□□□□ -1.91
Ubr4-201ENSMUST00000097822 Megf8P60882 2789 aa3.05□□□□□ -1.92
Ubr4-201ENSMUST00000097822 Gm2696A0A1W2P709 240 aa3.03□□□□□ -1.92
Ubr4-201ENSMUST00000097822 Lama5Q61001 3718 aa3.02□□□□□ -1.93
Ubr4-201ENSMUST00000097822 Tenm1Q9WTS4 2731 aa3.01□□□□□ -1.93
Ubr4-201ENSMUST00000097822 Cmya5Q70KF4 3739 aa2.99□□□□□ -1.93
Ubr4-201ENSMUST00000097822 Muc4Q8JZM8 3443 aa2.99□□□□□ -1.93
Ubr4-201ENSMUST00000097822 Gm17402F6Z0L5 76 aa2.95□□□□□ -1.94
Ubr4-201ENSMUST00000097822 Gm17416Q30KP4 66 aa2.95□□□□□ -1.94
Ubr4-201ENSMUST00000097822 Col7a1Q63870 2944 aa2.93□□□□□ -1.94
Ubr4-201ENSMUST00000097822 Krtap3-2Q9D638 99 aa2.93□□□□□ -1.94
Ubr4-201ENSMUST00000097822 Krtap3-3Q9D7P0 99 aa2.93□□□□□ -1.94
Ubr4-201ENSMUST00000097822 Tenm4Q3UHK6 2771 aa2.93□□□□□ -1.94
Ubr4-201ENSMUST00000097822 2210017I01RikA0A0A6YVV1 95 aa2.92□□□□□ -1.94
Ubr4-201ENSMUST00000097822 Svep1A2AVA0 3567 aa2.91□□□□□ -1.94
Ubr4-201ENSMUST00000097822 Gm11939A2A592 99 aa2.88□□□□□ -1.95
Ubr4-201ENSMUST00000097822 4933428G20RikQ9D3X4 101 aa2.87□□□□□ -1.95
Ubr4-201ENSMUST00000097822 Krtap7-1Q9D3I6 87 aa2.86□□□□□ -1.95
Ubr4-201ENSMUST00000097822 Gm9918Q8BUR5 174 aa2.85□□□□□ -1.95
Ubr4-201ENSMUST00000097822 Tenm2Q9WTS5 2764 aa2.85□□□□□ -1.95
Ubr4-201ENSMUST00000097822 CubnQ9JLB4 3623 aa2.85□□□□□ -1.95
Ubr4-201ENSMUST00000097822 Fbn1Q61554 2873 aaKnown RBP2.85□□□□□ -1.95
Ubr4-201ENSMUST00000097822 VwfQ8CIZ8 2813 aa2.84□□□□□ -1.95
Ubr4-201ENSMUST00000097822 Krtap13-1Q8K198 168 aa2.84□□□□□ -1.95
Ubr4-201ENSMUST00000097822 Krtap3-1A2A591 98 aa2.84□□□□□ -1.95
Ubr4-201ENSMUST00000097822 Gm9736A0A1W2P7N1 277 aa2.82□□□□□ -1.96
Ubr4-201ENSMUST00000097822 LystP97412 3788 aa2.81□□□□□ -1.96
Ubr4-201ENSMUST00000097822 Gm19668J3QMD1 248 aa2.79□□□□□ -1.96
Ubr4-201ENSMUST00000097822 Csmd2V9GX34 3611 aa2.77□□□□□ -1.97
Ubr4-201ENSMUST00000097822 Muc6Q80T03 2850 aa2.71□□□□□ -1.98
Ubr4-201ENSMUST00000097822 Gm10318A0A1W2P728 225 aa2.7□□□□□ -1.98
Ubr4-201ENSMUST00000097822 BsnO88737 3942 aa2.69□□□□□ -1.98
Ubr4-201ENSMUST00000097822 Csmd3Q80T79 3707 aa2.67□□□□□ -1.98
Ubr4-201ENSMUST00000097822 Ank2Q8C8R3 3898 aa2.66□□□□□ -1.98
Ubr4-201ENSMUST00000097822 Huwe1Q7TMY8 4377 aaKnown RBP2.65□□□□□ -1.98
Ubr4-201ENSMUST00000097822 Dnah10D3YYQ8 4591 aa2.63□□□□□ -1.99
Ubr4-201ENSMUST00000097822 Xirp2Q4U4S6 3784 aa2.62□□□□□ -1.99
Ubr4-201ENSMUST00000097822 Sprr2a3Q4KL71 83 aa2.61□□□□□ -1.99
Ubr4-201ENSMUST00000097822 Sprr2a1Q9CQK8 83 aa2.61□□□□□ -1.99
Ubr4-201ENSMUST00000097822 Krtap19-5O08632 62 aa2.61□□□□□ -1.99
Ubr4-201ENSMUST00000097822 Gm19402J3QJV4 266 aa2.6□□□□□ -1.99
Ubr4-201ENSMUST00000097822 Hspg2Q05793 3707 aaKnown RBP2.58□□□□□ -2
Ubr4-201ENSMUST00000097822 Crct1Q6PAI5 102 aa2.58□□□□□ -2
Ubr4-201ENSMUST00000097822 Gm6358A0A087WPH4 74 aa2.56□□□□□ -2
Ubr4-201ENSMUST00000097822 Dnah11E9Q7N9 4488 aa2.52□□□□□ -2.01
Ubr4-201ENSMUST00000097822 Krtap1-5A2A590 122 aa2.51□□□□□ -2.01
Ubr4-201ENSMUST00000097822 Dnah2P0C6F1 4456 aa2.51□□□□□ -2.01
Ubr4-201ENSMUST00000097822 Dnah14A0A140LIJ4 4489 aa2.5□□□□□ -2.01
Ubr4-201ENSMUST00000097822 Gm18596A0A1W2P860 280 aa2.5□□□□□ -2.01
Ubr4-201ENSMUST00000097822 ApobE9Q414 4505 aa2.48□□□□□ -2.01
Ubr4-201ENSMUST00000097822 Hectd4E9Q2E4 4418 aa2.48□□□□□ -2.01
Ubr4-201ENSMUST00000097822 SacsQ9JLC8 4582 aa2.46□□□□□ -2.02
Ubr4-201ENSMUST00000097822 Dnah17Q69Z23 4481 aa2.43□□□□□ -2.02
Ubr4-201ENSMUST00000097822 Krtap19-9bQ99NG9 58 aa2.42□□□□□ -2.02
Ubr4-201ENSMUST00000097822 Krtap1-4Q3V2D6 188 aa2.41□□□□□ -2.02
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms