RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 DmdP11531 3678 aa7.52□□□□□ -1.21
Col3a1-201ENSMUST00000087883 Gm20537G3UYK7 97 aa7.51□□□□□ -1.21
Col3a1-201ENSMUST00000087883 Utp20Q5XG71 2788 aaKnown RBP7.51□□□□□ -1.21
Col3a1-201ENSMUST00000087883 Nbeal2Q6ZQA0 2742 aa7.5□□□□□ -1.21
Col3a1-201ENSMUST00000087883 Dmxl2Q8BPN8 3032 aa7.49□□□□□ -1.21
Col3a1-201ENSMUST00000087883 VcanQ62059 3357 aa7.48□□□□□ -1.21
Col3a1-201ENSMUST00000087883 NbeaQ9EPN1 2936 aa7.48□□□□□ -1.21
Col3a1-201ENSMUST00000087883 Myo15aQ9QZZ4 3511 aa7.48□□□□□ -1.21
Col3a1-201ENSMUST00000087883 Gm5965D3Z724 196 aa7.46□□□□□ -1.22
Col3a1-201ENSMUST00000087883 Pkd1l1Q8R526 2615 aa7.43□□□□□ -1.22
Col3a1-201ENSMUST00000087883 Dchs2A0A0A6YW72 3346 aa7.43□□□□□ -1.22
Col3a1-201ENSMUST00000087883 DspE9Q557 2883 aaKnown RBP7.4□□□□□ -1.22
Col3a1-201ENSMUST00000087883 2310057N15RikQ9D6T8 200 aa7.39□□□□□ -1.23
Col3a1-201ENSMUST00000087883 RelnQ60841 3461 aa7.39□□□□□ -1.23
Col3a1-201ENSMUST00000087883 TgO08710 2766 aa7.38□□□□□ -1.23
Col3a1-201ENSMUST00000087883 Zzef1Q5SSH7 2924 aa7.38□□□□□ -1.23
Col3a1-201ENSMUST00000087883 Dchs1E9PVD3 3291 aa7.35□□□□□ -1.23
Col3a1-201ENSMUST00000087883 B930094E09RikQ8C4T2 136 aa7.33□□□□□ -1.24
Col3a1-201ENSMUST00000087883 Trank1Q8BV79 2999 aa7.33□□□□□ -1.24
Col3a1-201ENSMUST00000087883 Itpr2Q9Z329 2701 aa7.3□□□□□ -1.24
Col3a1-201ENSMUST00000087883 FcgbpE9Q0B5 2583 aa7.3□□□□□ -1.24
Col3a1-201ENSMUST00000087883 Srrm2Q8BTI8 2703 aaKnown RBP7.27□□□□□ -1.25
Col3a1-201ENSMUST00000087883 Tex15F8VPN2 2785 aa7.27□□□□□ -1.25
Col3a1-201ENSMUST00000087883 Akap9Q70FJ1 3797 aa7.27□□□□□ -1.25
Col3a1-201ENSMUST00000087883 A930033H14RikG5E8X6 103 aa7.26□□□□□ -1.25
Col3a1-201ENSMUST00000087883 Col6a5A6H584 2640 aa7.26□□□□□ -1.25
Col3a1-201ENSMUST00000087883 ApcQ61315 2845 aa7.24□□□□□ -1.25
Col3a1-201ENSMUST00000087883 2310079G19RikQ9D6L6 185 aa7.23□□□□□ -1.25
Col3a1-201ENSMUST00000087883 SpegQ62407 3262 aa7.23□□□□□ -1.25
Col3a1-201ENSMUST00000087883 Hivep1Q03172 2688 aa7.21□□□□□ -1.25
Col3a1-201ENSMUST00000087883 FlncQ8VHX6 2726 aaKnown RBP7.21□□□□□ -1.26
Col3a1-201ENSMUST00000087883 Prm2P07978 107 aa7.17□□□□□ -1.26
Col3a1-201ENSMUST00000087883 Tenm3Q9WTS6 2715 aa7.13□□□□□ -1.27
Col3a1-201ENSMUST00000087883 Csmd1Q923L3 3564 aa7.12□□□□□ -1.27
Col3a1-201ENSMUST00000087883 Gm884A2A9H6 3643 aa7.12□□□□□ -1.27
Col3a1-201ENSMUST00000087883 Igfn1Q3KNY0 2849 aa7.09□□□□□ -1.27
Col3a1-201ENSMUST00000087883 Celsr2Q9R0M0 2920 aa7.08□□□□□ -1.28
Col3a1-201ENSMUST00000087883 Zfhx4Q9JJN2 3550 aa7.05□□□□□ -1.28
Col3a1-201ENSMUST00000087883 Chd9Q8BYH8 2885 aa7.04□□□□□ -1.28
Col3a1-201ENSMUST00000087883 Smg1Q8BKX6 3658 aaKnown RBP7.04□□□□□ -1.28
Col3a1-201ENSMUST00000087883 Lama5Q61001 3718 aa7.03□□□□□ -1.28
Col3a1-201ENSMUST00000087883 Tenm4Q3UHK6 2771 aa7.02□□□□□ -1.29
Col3a1-201ENSMUST00000087883 Gm17416Q30KP4 66 aa7.01□□□□□ -1.29
Col3a1-201ENSMUST00000087883 SpenQ62504 3644 aaKnown RBP6.99□□□□□ -1.29
Col3a1-201ENSMUST00000087883 Nf1Q04690 2841 aa6.97□□□□□ -1.29
Col3a1-201ENSMUST00000087883 Pdzd2E9Q1M1 2796 aa6.95□□□□□ -1.3
Col3a1-201ENSMUST00000087883 LrbaQ9ESE1 2856 aa6.93□□□□□ -1.3
Col3a1-201ENSMUST00000087883 Muc5acE9QAQ8 3455 aa6.92□□□□□ -1.3
Col3a1-201ENSMUST00000087883 2210017I01RikA0A0A6YVV1 95 aa6.91□□□□□ -1.3
Col3a1-201ENSMUST00000087883 Gm9736A0A1W2P7N1 277 aa6.91□□□□□ -1.3
Col3a1-201ENSMUST00000087883 Gm17402F6Z0L5 76 aa6.9□□□□□ -1.3
Col3a1-201ENSMUST00000087883 OtogO55225 2910 aa6.88□□□□□ -1.31
Col3a1-201ENSMUST00000087883 Gm9918Q8BUR5 174 aa6.83□□□□□ -1.32
Col3a1-201ENSMUST00000087883 Ank2Q8C8R3 3898 aa6.74□□□□□ -1.33
Col3a1-201ENSMUST00000087883 Helz2E9QAM5 2947 aaKnown RBP6.73□□□□□ -1.33
Col3a1-201ENSMUST00000087883 Svep1A2AVA0 3567 aa6.7□□□□□ -1.34
Col3a1-201ENSMUST00000087883 Cmya5Q70KF4 3739 aa6.69□□□□□ -1.34
Col3a1-201ENSMUST00000087883 Gm19668J3QMD1 248 aa6.68□□□□□ -1.34
Col3a1-201ENSMUST00000087883 4933428G20RikQ9D3X4 101 aa6.64□□□□□ -1.35
Col3a1-201ENSMUST00000087883 Tenm1Q9WTS4 2731 aa6.63□□□□□ -1.35
Col3a1-201ENSMUST00000087883 Gm10318A0A1W2P728 225 aa6.63□□□□□ -1.35
Col3a1-201ENSMUST00000087883 Gm11939A2A592 99 aa6.62□□□□□ -1.35
Col3a1-201ENSMUST00000087883 Fbn1Q61554 2873 aaKnown RBP6.58□□□□□ -1.36
Col3a1-201ENSMUST00000087883 Tenm2Q9WTS5 2764 aa6.57□□□□□ -1.36
Col3a1-201ENSMUST00000087883 Krtap13-1Q8K198 168 aa6.54□□□□□ -1.36
Col3a1-201ENSMUST00000087883 Megf8P60882 2789 aa6.47□□□□□ -1.37
Col3a1-201ENSMUST00000087883 Krtap3-1A2A591 98 aa6.46□□□□□ -1.38
Col3a1-201ENSMUST00000087883 Krtap3-2Q9D638 99 aa6.44□□□□□ -1.38
Col3a1-201ENSMUST00000087883 Krtap3-3Q9D7P0 99 aa6.44□□□□□ -1.38
Col3a1-201ENSMUST00000087883 Crct1Q6PAI5 102 aa6.42□□□□□ -1.38
Col3a1-201ENSMUST00000087883 Krtap19-5O08632 62 aa6.39□□□□□ -1.39
Col3a1-201ENSMUST00000087883 LystP97412 3788 aa6.38□□□□□ -1.39
Col3a1-201ENSMUST00000087883 Csmd2V9GX34 3611 aa6.38□□□□□ -1.39
Col3a1-201ENSMUST00000087883 Muc4Q8JZM8 3443 aa6.36□□□□□ -1.39
Col3a1-201ENSMUST00000087883 VwfQ8CIZ8 2813 aa6.33□□□□□ -1.4
Col3a1-201ENSMUST00000087883 Dnah14A0A140LIJ4 4489 aa6.29□□□□□ -1.4
Col3a1-201ENSMUST00000087883 Huwe1Q7TMY8 4377 aaKnown RBP6.23□□□□□ -1.41
Col3a1-201ENSMUST00000087883 BsnO88737 3942 aa6.16□□□□□ -1.42
Col3a1-201ENSMUST00000087883 Xirp2Q4U4S6 3784 aa6.08□□□□□ -1.44
Col3a1-201ENSMUST00000087883 Gm6358A0A087WPH4 74 aa6.07□□□□□ -1.44
Col3a1-201ENSMUST00000087883 Dnah17Q69Z23 4481 aa6.07□□□□□ -1.44
Col3a1-201ENSMUST00000087883 Col7a1Q63870 2944 aa6.04□□□□□ -1.44
Col3a1-201ENSMUST00000087883 Krtap7-1Q9D3I6 87 aa6.03□□□□□ -1.44
Col3a1-201ENSMUST00000087883 Sprr2a3Q4KL71 83 aa6□□□□□ -1.45
Col3a1-201ENSMUST00000087883 Sprr2a1Q9CQK8 83 aa6□□□□□ -1.45
Col3a1-201ENSMUST00000087883 Dnah10D3YYQ8 4591 aa6□□□□□ -1.45
Col3a1-201ENSMUST00000087883 Muc6Q80T03 2850 aa5.98□□□□□ -1.45
Col3a1-201ENSMUST00000087883 CubnQ9JLB4 3623 aa5.97□□□□□ -1.45
Col3a1-201ENSMUST00000087883 Krtap1-5A2A590 122 aa5.95□□□□□ -1.46
Col3a1-201ENSMUST00000087883 Hspg2Q05793 3707 aaKnown RBP5.9□□□□□ -1.47
Col3a1-201ENSMUST00000087883 Dnah5Q8VHE6 4621 aa5.89□□□□□ -1.47
Col3a1-201ENSMUST00000087883 Krtap19-9aF8WH65 55 aa5.88□□□□□ -1.47
Col3a1-201ENSMUST00000087883 Dnah11E9Q7N9 4488 aa5.87□□□□□ -1.47
Col3a1-201ENSMUST00000087883 Vps13dB1ART2 4390 aa5.86□□□□□ -1.47
Col3a1-201ENSMUST00000087883 PlecQ9QXS1 4691 aaKnown RBP5.8□□□□□ -1.48
Col3a1-201ENSMUST00000087883 Krtap1-4Q3V2D6 188 aa5.79□□□□□ -1.48
Col3a1-201ENSMUST00000087883 Krtap8-1O08633 61 aa5.78□□□□□ -1.48
Col3a1-201ENSMUST00000087883 Dnah7bL7N1Y0 4068 aa5.76□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Dnah3Q8BW94 4083 aa5.76□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Krtap19-9bQ99NG9 58 aa5.76□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms