RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 A0A1Y7VLE6 161 aa5.38□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Defb2P82020 71 aa5.38□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Defb39Q70KL3 74 aa5.37□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Dnah17Q69Z23 4481 aa5.37□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Gm9955Q8CEJ8 102 aa5.36□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Itpr1P11881 2749 aa5.36□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 FasnP19096 2504 aaKnown RBP5.35□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Wfdc17Q5SSJ1 76 aa5.35□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 RetnlbQ99P86 105 aa5.35□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Gm10382Q3V0T5 144 aa5.34□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Dnah9B1AR51 4484 aa5.34□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Cox6b2Q80ZN9 88 aa5.33□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 Usp24B1AY13 2617 aaKnown RBP5.33□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 Gm4491E0CX42 125 aa5.33□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 Wfdc3Q14AE4 130 aa5.32□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 2310061N02RikQ9D6S9 174 aa5.31□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 NbdyA0A0N4SUI7 68 aa5.31□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 Hivep1Q03172 2688 aa5.29□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 VwfQ8CIZ8 2813 aa5.29□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 Rpl37Q9D823 97 aa5.29□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 Krtap28-13A0A087WQP5 138 aa5.28□□□□□ -1.56
Hmgb1-201ENSMUST00000085546 Spaca4Q80ZQ0 127 aa5.27□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 2310050C09RikG5E8Z3 280 aa5.27□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Gm9112A2AI92 75 aa5.26□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Adm2Q7TNK8 150 aa5.26□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Gpr15lA0A0B4J1N3 78 aa5.26□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 A030005L19RikA0A1Y7VIU2 113 aa5.26□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Hectd4E9Q2E4 4418 aa5.26□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Hectd1Q69ZR2 2618 aaKnown RBP5.25□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Col7a1Q63870 2944 aa5.25□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Gm9508A0A1W2P7W0 230 aa5.24□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Gm3233E9Q2H5 230 aa5.24□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Tnp2P11378 117 aa5.24□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Gm5965D3Z724 196 aa5.24□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Gm3250E9Q1M3 230 aa5.24□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Tenm4Q3UHK6 2771 aa5.23□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Ly6g6cQ9Z1Q4 126 aa5.23□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Tenm1Q9WTS4 2731 aa5.23□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Myo18bE9PV66 2605 aa5.22□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Dnah7aE9Q0T8 4024 aa5.22□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Muc2Q80Z19 2680 aa5.21□□□□□ -1.57
Hmgb1-201ENSMUST00000085546 Notch1Q01705 2531 aa5.2□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Krtap10-10A0A1W2P7T6 217 aa5.19□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Col6a5A6H584 2640 aa5.19□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 2310057N15RikQ9D6T8 200 aa5.18□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Dync2h1Q45VK7 4306 aa5.17□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Unc79Q0KK59 2596 aa5.17□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Gm17606F6ZL36 78 aa5.16□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 B930094E09RikQ8C4T2 136 aa5.16□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Igsf10Q3V1M1 2594 aa5.16□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Nsd1O88491 2588 aaKnown RBP5.15□□□□□ -1.58
Hmgb1-201ENSMUST00000085546 Dnah14A0A140LIJ4 4489 aa5.15□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 FlnbQ80X90 2602 aaKnown RBP5.15□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Dnah2P0C6F1 4456 aa5.14□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Gm7138L7N2C3 230 aa5.14□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Gm3238W4VSP7 230 aa5.14□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 A030005K14RikA0A1Y7VNY1 122 aa5.13□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Krtap7-1Q9D3I6 87 aa5.13□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Itpr2Q9Z329 2701 aa5.12□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 AtrQ9JKK8 2635 aa5.11□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Fras1Q80T14 4010 aa5.11□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Dnah10D3YYQ8 4591 aa5.1□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Pkd1l1Q8R526 2615 aa5.09□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 CicQ924A2 2510 aa5.09□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 2210017I01RikA0A0A6YVV1 95 aa5.09□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 ApobE9Q414 4505 aa5.09□□□□□ -1.59
Hmgb1-201ENSMUST00000085546 Dnah7cA0A087WR13 4024 aa5.09□□□□□ -1.6
Hmgb1-201ENSMUST00000085546 Vps13dB1ART2 4390 aa5.08□□□□□ -1.6
Hmgb1-201ENSMUST00000085546 Sec61bQ9CQS8 96 aaKnown RBP5.07□□□□□ -1.6
Hmgb1-201ENSMUST00000085546 Dnah6E9Q0B6 4144 aa5.07□□□□□ -1.6
Hmgb1-201ENSMUST00000085546 Gm7544A0A1Y7VJ58 118 aa5.05□□□□□ -1.6
Hmgb1-201ENSMUST00000085546 Gm40193A0A1B0GT39 78 aa5.05□□□□□ -1.6
Hmgb1-201ENSMUST00000085546 1600014C23RikQ9DAX4 101 aa5.05□□□□□ -1.6
Hmgb1-201ENSMUST00000085546 Fam229aB2KGE5 128 aa5.01□□□□□ -1.61
Hmgb1-201ENSMUST00000085546 Gm9918Q8BUR5 174 aa5□□□□□ -1.61
Hmgb1-201ENSMUST00000085546 Gm19426M0QWC7 77 aa4.99□□□□□ -1.61
Hmgb1-201ENSMUST00000085546 Krtap15-1Q9QZU5 150 aa4.99□□□□□ -1.61
Hmgb1-201ENSMUST00000085546 Mast4Q811L6 2618 aa4.98□□□□□ -1.61
Hmgb1-201ENSMUST00000085546 Rps29P62274 56 aa4.97□□□□□ -1.61
Hmgb1-201ENSMUST00000085546 Muc6Q80T03 2850 aa4.96□□□□□ -1.62
Hmgb1-201ENSMUST00000085546 Dnah5Q8VHE6 4621 aa4.95□□□□□ -1.62
Hmgb1-201ENSMUST00000085546 Stard9Q80TF6 4561 aa4.94□□□□□ -1.62
Hmgb1-201ENSMUST00000085546 Stab1Q8R4Y4 2571 aa4.94□□□□□ -1.62
Hmgb1-201ENSMUST00000085546 Huwe1Q7TMY8 4377 aaKnown RBP4.93□□□□□ -1.62
Hmgb1-201ENSMUST00000085546 Gm17349F7BGH6 99 aa4.91□□□□□ -1.62
Hmgb1-201ENSMUST00000085546 Gm19668J3QMD1 248 aa4.91□□□□□ -1.62
Hmgb1-201ENSMUST00000085546 Vps13bQ80TY5 3993 aa4.89□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Gm7137J3QMW1 236 aa4.87□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 PrkdcP97313 4128 aa4.87□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Pkd1O08852 4293 aa4.87□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Gm36176A0A1W2P8D5 158 aa4.87□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Stab2Q8R4U0 2559 aa4.87□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Lrp1bQ9JI18 4599 aa4.86□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 PlecQ9QXS1 4691 aaKnown RBP4.86□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Pkhd1E9PZ36 4059 aa4.85□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Fn1P11276 2477 aaKnown RBP4.85□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 Defb11Q8R2I7 77 aa4.85□□□□□ -1.63
Hmgb1-201ENSMUST00000085546 SacsQ9JLC8 4582 aa4.84□□□□□ -1.64
Hmgb1-201ENSMUST00000085546 9530053A07RikE9PVG8 2581 aa4.84□□□□□ -1.64
Hmgb1-201ENSMUST00000085546 TnxbO35452 4006 aa4.8□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 54.6 ms