RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 SpenQ62504 3644 aaKnown RBP5.96□□□□□ -1.46
Scn8a-201ENSMUST00000082209 Dchs2A0A0A6YW72 3346 aa5.95□□□□□ -1.46
Scn8a-201ENSMUST00000082209 Igfn1Q3KNY0 2849 aa5.94□□□□□ -1.46
Scn8a-201ENSMUST00000082209 2310061N02RikQ9D6S9 174 aa5.93□□□□□ -1.46
Scn8a-201ENSMUST00000082209 Col6a3E9PWQ3 3284 aa5.93□□□□□ -1.46
Scn8a-201ENSMUST00000082209 DmdP11531 3678 aa5.92□□□□□ -1.46
Scn8a-201ENSMUST00000082209 SpegQ62407 3262 aa5.91□□□□□ -1.46
Scn8a-201ENSMUST00000082209 Dchs1E9PVD3 3291 aa5.9□□□□□ -1.46
Scn8a-201ENSMUST00000082209 Krtap14O08640 167 aa5.89□□□□□ -1.47
Scn8a-201ENSMUST00000082209 Hivep1Q03172 2688 aa5.89□□□□□ -1.47
Scn8a-201ENSMUST00000082209 Pdzd2E9Q1M1 2796 aa5.87□□□□□ -1.47
Scn8a-201ENSMUST00000082209 D6Ertd527eA0A0N4SWI3 464 aa5.86□□□□□ -1.47
Scn8a-201ENSMUST00000082209 Chd9Q8BYH8 2885 aa5.85□□□□□ -1.47
Scn8a-201ENSMUST00000082209 FlncQ8VHX6 2726 aaKnown RBP5.85□□□□□ -1.47
Scn8a-201ENSMUST00000082209 VcanQ62059 3357 aa5.85□□□□□ -1.47
Scn8a-201ENSMUST00000082209 Gm7137J3QMW1 236 aa5.82□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Celsr2Q9R0M0 2920 aa5.82□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Nf1Q04690 2841 aa5.8□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Gm36176A0A1W2P8D5 158 aa5.8□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Ank2Q8C8R3 3898 aa5.79□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Gm9508A0A1W2P7W0 230 aa5.79□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Cmya5Q70KF4 3739 aa5.78□□□□□ -1.48
Scn8a-201ENSMUST00000082209 FcgbpE9Q0B5 2583 aa5.78□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Gm884A2A9H6 3643 aa5.78□□□□□ -1.48
Scn8a-201ENSMUST00000082209 Tnp1P10856 55 aa5.77□□□□□ -1.49
Scn8a-201ENSMUST00000082209 Krtap13O88375 197 aa5.75□□□□□ -1.49
Scn8a-201ENSMUST00000082209 Smg1Q8BKX6 3658 aaKnown RBP5.74□□□□□ -1.49
Scn8a-201ENSMUST00000082209 Ndufaf8A2AMZ4 74 aa5.73□□□□□ -1.49
Scn8a-201ENSMUST00000082209 Gm21887J3QQ04 176 aa5.72□□□□□ -1.49
Scn8a-201ENSMUST00000082209 Csmd1Q923L3 3564 aa5.72□□□□□ -1.49
Scn8a-201ENSMUST00000082209 Lama5Q61001 3718 aa5.7□□□□□ -1.5
Scn8a-201ENSMUST00000082209 RelnQ60841 3461 aa5.69□□□□□ -1.5
Scn8a-201ENSMUST00000082209 LrbaQ9ESE1 2856 aa5.67□□□□□ -1.5
Scn8a-201ENSMUST00000082209 Tenm1Q9WTS4 2731 aa5.65□□□□□ -1.5
Scn8a-201ENSMUST00000082209 Tenm4Q3UHK6 2771 aa5.61□□□□□ -1.51
Scn8a-201ENSMUST00000082209 A930033H14RikG5E8X6 103 aa5.61□□□□□ -1.51
Scn8a-201ENSMUST00000082209 Gm9112A2AI92 75 aa5.6□□□□□ -1.51
Scn8a-201ENSMUST00000082209 Zfhx4Q9JJN2 3550 aa5.59□□□□□ -1.51
Scn8a-201ENSMUST00000082209 Gm20537G3UYK7 97 aa5.57□□□□□ -1.52
Scn8a-201ENSMUST00000082209 Gm17402F6Z0L5 76 aa5.56□□□□□ -1.52
Scn8a-201ENSMUST00000082209 Helz2E9QAM5 2947 aaKnown RBP5.55□□□□□ -1.52
Scn8a-201ENSMUST00000082209 Gm17416Q30KP4 66 aa5.54□□□□□ -1.52
Scn8a-201ENSMUST00000082209 OtogO55225 2910 aa5.53□□□□□ -1.52
Scn8a-201ENSMUST00000082209 Muc5acE9QAQ8 3455 aa5.53□□□□□ -1.52
Scn8a-201ENSMUST00000082209 Tenm3Q9WTS6 2715 aa5.53□□□□□ -1.52
Scn8a-201ENSMUST00000082209 B930094E09RikQ8C4T2 136 aa5.53□□□□□ -1.52
Scn8a-201ENSMUST00000082209 Gm9507D3Z5T3 223 aa5.52□□□□□ -1.53
Scn8a-201ENSMUST00000082209 2310079G19RikQ9D6L6 185 aa5.52□□□□□ -1.53
Scn8a-201ENSMUST00000082209 Gm5965D3Z724 196 aa5.37□□□□□ -1.55
Scn8a-201ENSMUST00000082209 Csmd2V9GX34 3611 aa5.37□□□□□ -1.55
Scn8a-201ENSMUST00000082209 Krtap10-4Q08EG8 221 aa5.37□□□□□ -1.55
Scn8a-201ENSMUST00000082209 2210017I01RikA0A0A6YVV1 95 aa5.36□□□□□ -1.55
Scn8a-201ENSMUST00000082209 Fbn1Q61554 2873 aaKnown RBP5.29□□□□□ -1.56
Scn8a-201ENSMUST00000082209 VwfQ8CIZ8 2813 aa5.28□□□□□ -1.56
Scn8a-201ENSMUST00000082209 Krtap10-10A0A1W2P7T6 217 aa5.27□□□□□ -1.57
Scn8a-201ENSMUST00000082209 Xirp2Q4U4S6 3784 aa5.26□□□□□ -1.57
Scn8a-201ENSMUST00000082209 BsnO88737 3942 aa5.26□□□□□ -1.57
Scn8a-201ENSMUST00000082209 Svep1A2AVA0 3567 aa5.25□□□□□ -1.57
Scn8a-201ENSMUST00000082209 LystP97412 3788 aa5.23□□□□□ -1.57
Scn8a-201ENSMUST00000082209 Gm2696A0A1W2P709 240 aa5.23□□□□□ -1.57
Scn8a-201ENSMUST00000082209 2310057N15RikQ9D6T8 200 aa5.19□□□□□ -1.58
Scn8a-201ENSMUST00000082209 Megf8P60882 2789 aa5.13□□□□□ -1.59
Scn8a-201ENSMUST00000082209 4933428G20RikQ9D3X4 101 aa5.13□□□□□ -1.59
Scn8a-201ENSMUST00000082209 Tenm2Q9WTS5 2764 aa5.06□□□□□ -1.6
Scn8a-201ENSMUST00000082209 Gm19668J3QMD1 248 aa5.05□□□□□ -1.6
Scn8a-201ENSMUST00000082209 Dnah3Q8BW94 4083 aa5.01□□□□□ -1.61
Scn8a-201ENSMUST00000082209 Muc4Q8JZM8 3443 aa5□□□□□ -1.61
Scn8a-201ENSMUST00000082209 Prm2P07978 107 aa4.99□□□□□ -1.61
Scn8a-201ENSMUST00000082209 Gm11939A2A592 99 aa4.98□□□□□ -1.61
Scn8a-201ENSMUST00000082209 Col7a1Q63870 2944 aa4.98□□□□□ -1.61
Scn8a-201ENSMUST00000082209 CubnQ9JLB4 3623 aa4.95□□□□□ -1.62
Scn8a-201ENSMUST00000082209 Hspg2Q05793 3707 aaKnown RBP4.94□□□□□ -1.62
Scn8a-201ENSMUST00000082209 Muc6Q80T03 2850 aa4.9□□□□□ -1.62
Scn8a-201ENSMUST00000082209 Krtap3-2Q9D638 99 aa4.89□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Krtap3-3Q9D7P0 99 aa4.89□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Csmd3Q80T79 3707 aa4.89□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Dnah7bL7N1Y0 4068 aa4.88□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Huwe1Q7TMY8 4377 aaKnown RBP4.86□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Kmt2aP55200 3966 aa4.86□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Krtap13-1Q8K198 168 aa4.84□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Krtap3-1A2A591 98 aa4.84□□□□□ -1.63
Scn8a-201ENSMUST00000082209 Dnah6E9Q0B6 4144 aa4.79□□□□□ -1.64
Scn8a-201ENSMUST00000082209 PrkdcP97313 4128 aa4.79□□□□□ -1.64
Scn8a-201ENSMUST00000082209 TnxbO35452 4006 aa4.78□□□□□ -1.64
Scn8a-201ENSMUST00000082209 Krtap19-5O08632 62 aa4.77□□□□□ -1.65
Scn8a-201ENSMUST00000082209 Gm9736A0A1W2P7N1 277 aa4.76□□□□□ -1.65
Scn8a-201ENSMUST00000082209 Dnah7cA0A087WR13 4024 aa4.68□□□□□ -1.66
Scn8a-201ENSMUST00000082209 Gm9918Q8BUR5 174 aa4.62□□□□□ -1.67
Scn8a-201ENSMUST00000082209 Dnah7aE9Q0T8 4024 aa4.62□□□□□ -1.67
Scn8a-201ENSMUST00000082209 Sprr2a3Q4KL71 83 aa4.61□□□□□ -1.67
Scn8a-201ENSMUST00000082209 Sprr2a1Q9CQK8 83 aa4.61□□□□□ -1.67
Scn8a-201ENSMUST00000082209 Krtap1-5A2A590 122 aa4.6□□□□□ -1.67
Scn8a-201ENSMUST00000082209 Dnah10D3YYQ8 4591 aa4.58□□□□□ -1.68
Scn8a-201ENSMUST00000082209 Dnah14A0A140LIJ4 4489 aa4.56□□□□□ -1.68
Scn8a-201ENSMUST00000082209 Dnah1E9Q8T7 4250 aa4.55□□□□□ -1.68
Scn8a-201ENSMUST00000082209 Vps13bQ80TY5 3993 aa4.53□□□□□ -1.68
Scn8a-201ENSMUST00000082209 Krtap19-9aF8WH65 55 aa4.53□□□□□ -1.68
Scn8a-201ENSMUST00000082209 Fras1Q80T14 4010 aa4.5□□□□□ -1.69
Scn8a-201ENSMUST00000082209 Krtap7-1Q9D3I6 87 aa4.48□□□□□ -1.69
Scn8a-201ENSMUST00000082209 Dync2h1Q45VK7 4306 aa4.47□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 79.1 ms