RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Krtap29-1A2A5X4 342 aa11,08□□□□□ -0,64
Upf1-201ENSMUST00000075666 CriptO70333 101 aa11,02□□□□□ -0,65
Upf1-201ENSMUST00000075666 2310061N02RikQ9D6S9 174 aa11,02□□□□□ -0,65
Upf1-201ENSMUST00000075666 Gm17349F7BGH6 99 aa11,02□□□□□ -0,65
Upf1-201ENSMUST00000075666 Smg1Q8BKX6 3658 aaKnown RBP10,97□□□□□ -0,65
Upf1-201ENSMUST00000075666 2310050C09RikG5E8Z3 280 aa10,94□□□□□ -0,66
Upf1-201ENSMUST00000075666 Krtap13O88375 197 aa10,94□□□□□ -0,66
Upf1-201ENSMUST00000075666 Pla2g10Q9QXX3 151 aa10,88□□□□□ -0,67
Upf1-201ENSMUST00000075666 Krtap14O08640 167 aa10,85□□□□□ -0,67
Upf1-201ENSMUST00000075666 Gm20538F6Z9R1 75 aa10,84□□□□□ -0,67
Upf1-201ENSMUST00000075666 Muc5acE9QAQ8 3455 aa10,8□□□□□ -0,68
Upf1-201ENSMUST00000075666 Rpl37Q9D823 97 aa10,77□□□□□ -0,69
Upf1-201ENSMUST00000075666 Romo1P60603 79 aa10,77□□□□□ -0,69
Upf1-201ENSMUST00000075666 OxtP35454 125 aa10,74□□□□□ -0,69
Upf1-201ENSMUST00000075666 Zfhx4Q9JJN2 3550 aa10,73□□□□□ -0,69
Upf1-201ENSMUST00000075666 Gm9507D3Z5T3 223 aa10,73□□□□□ -0,69
Upf1-201ENSMUST00000075666 FcgbpE9Q0B5 2583 aa10,73□□□□□ -0,69
Upf1-201ENSMUST00000075666 Tnp2P11378 117 aa10,72□□□□□ -0,69
Upf1-201ENSMUST00000075666 Gm884A2A9H6 3643 aa10,72□□□□□ -0,69
Upf1-201ENSMUST00000075666 Gm10382Q3V0T5 144 aa10,65□□□□□ -0,7
Upf1-201ENSMUST00000075666 D6Ertd527eA0A0N4SWI3 464 aa10,65□□□□□ -0,7
Upf1-201ENSMUST00000075666 Lama5Q61001 3718 aa10,63□□□□□ -0,71
Upf1-201ENSMUST00000075666 Cox6b2Q80ZN9 88 aa10,62□□□□□ -0,71
Upf1-201ENSMUST00000075666 Krtap15-1Q9QZU5 150 aa10,61□□□□□ -0,71
Upf1-201ENSMUST00000075666 OtogO55225 2910 aa10,61□□□□□ -0,71
Upf1-201ENSMUST00000075666 Krtap10-4Q08EG8 221 aa10,58□□□□□ -0,72
Upf1-201ENSMUST00000075666 Gm5767A0A0J9YTU8 78 aa10,53□□□□□ -0,72
Upf1-201ENSMUST00000075666 Tenm4Q3UHK6 2771 aa10,42□□□□□ -0,74
Upf1-201ENSMUST00000075666 Spink7Q6IE32 76 aa10,38□□□□□ -0,75
Upf1-201ENSMUST00000075666 Cmya5Q70KF4 3739 aa10,38□□□□□ -0,75
Upf1-201ENSMUST00000075666 Rps29P62274 56 aa10,38□□□□□ -0,75
Upf1-201ENSMUST00000075666 Svep1A2AVA0 3567 aa10,36□□□□□ -0,75
Upf1-201ENSMUST00000075666 Krtap10-10A0A1W2P7T6 217 aa10,36□□□□□ -0,75
Upf1-201ENSMUST00000075666 Muc4Q8JZM8 3443 aa10,35□□□□□ -0,75
Upf1-201ENSMUST00000075666 Gm20537G3UYK7 97 aa10,32□□□□□ -0,76
Upf1-201ENSMUST00000075666 Gm19426M0QWC7 77 aa10,29□□□□□ -0,76
Upf1-201ENSMUST00000075666 2310079G19RikQ9D6L6 185 aa10,29□□□□□ -0,76
Upf1-201ENSMUST00000075666 Tenm1Q9WTS4 2731 aa10,28□□□□□ -0,76
Upf1-201ENSMUST00000075666 BC029722A0A0N4SW31 51 aa10,26□□□□□ -0,77
Upf1-201ENSMUST00000075666 Ndufaf8A2AMZ4 74 aa10,21□□□□□ -0,78
Upf1-201ENSMUST00000075666 Fam229aB2KGE5 128 aa10,21□□□□□ -0,78
Upf1-201ENSMUST00000075666 A930033H14RikG5E8X6 103 aa10,19□□□□□ -0,78
Upf1-201ENSMUST00000075666 Gm2696A0A1W2P709 240 aa10,13□□□□□ -0,79
Upf1-201ENSMUST00000075666 Camk2n1Q6QWF9 78 aa10,11□□□□□ -0,79
Upf1-201ENSMUST00000075666 Fbn1Q61554 2873 aaKnown RBP10,07□□□□□ -0,8
Upf1-201ENSMUST00000075666 VwfQ8CIZ8 2813 aa10,04□□□□□ -0,8
Upf1-201ENSMUST00000075666 Sec61bQ9CQS8 96 aaKnown RBP9,93□□□□□ -0,82
Upf1-201ENSMUST00000075666 Tenm2Q9WTS5 2764 aa9,86□□□□□ -0,83
Upf1-201ENSMUST00000075666 Gm5965D3Z724 196 aa9,82□□□□□ -0,84
Upf1-201ENSMUST00000075666 Megf8P60882 2789 aa9,78□□□□□ -0,84
Upf1-201ENSMUST00000075666 LystP97412 3788 aa9,72□□□□□ -0,85
Upf1-201ENSMUST00000075666 Gm9112A2AI92 75 aa9,72□□□□□ -0,85
Upf1-201ENSMUST00000075666 Gm40193A0A1B0GT39 78 aa9,71□□□□□ -0,86
Upf1-201ENSMUST00000075666 Csmd2V9GX34 3611 aa9,71□□□□□ -0,86
Upf1-201ENSMUST00000075666 B930094E09RikQ8C4T2 136 aa9,68□□□□□ -0,86
Upf1-201ENSMUST00000075666 Gm21887J3QQ04 176 aa9,66□□□□□ -0,86
Upf1-201ENSMUST00000075666 Krtap3-2Q9D638 99 aa9,62□□□□□ -0,87
Upf1-201ENSMUST00000075666 Krtap3-3Q9D7P0 99 aa9,62□□□□□ -0,87
Upf1-201ENSMUST00000075666 Ank2Q8C8R3 3898 aa9,6□□□□□ -0,87
Upf1-201ENSMUST00000075666 Prm2P07978 107 aa9,57□□□□□ -0,88
Upf1-201ENSMUST00000075666 CubnQ9JLB4 3623 aa9,55□□□□□ -0,88
Upf1-201ENSMUST00000075666 Gm11939A2A592 99 aa9,55□□□□□ -0,88
Upf1-201ENSMUST00000075666 Col7a1Q63870 2944 aa9,52□□□□□ -0,89
Upf1-201ENSMUST00000075666 Gm17416Q30KP4 66 aa9,51□□□□□ -0,89
Upf1-201ENSMUST00000075666 Muc6Q80T03 2850 aa9,47□□□□□ -0,89
Upf1-201ENSMUST00000075666 Gm9918Q8BUR5 174 aa9,4□□□□□ -0,9
Upf1-201ENSMUST00000075666 2310057N15RikQ9D6T8 200 aa9,39□□□□□ -0,91
Upf1-201ENSMUST00000075666 2210017I01RikA0A0A6YVV1 95 aa9,39□□□□□ -0,91
Upf1-201ENSMUST00000075666 Gm9736A0A1W2P7N1 277 aa9,35□□□□□ -0,91
Upf1-201ENSMUST00000075666 Tnp1P10856 55 aa9,29□□□□□ -0,92
Upf1-201ENSMUST00000075666 Gm17402F6Z0L5 76 aa9,2□□□□□ -0,94
Upf1-201ENSMUST00000075666 Dnah14A0A140LIJ4 4489 aa9,14□□□□□ -0,95
Upf1-201ENSMUST00000075666 Xirp2Q4U4S6 3784 aa9,12□□□□□ -0,95
Upf1-201ENSMUST00000075666 Krtap3-1A2A591 98 aa9,1□□□□□ -0,95
Upf1-201ENSMUST00000075666 Hspg2Q05793 3707 aaKnown RBP8,98□□□□□ -0,97
Upf1-201ENSMUST00000075666 Csmd3Q80T79 3707 aa8,94□□□□□ -0,98
Upf1-201ENSMUST00000075666 Krtap13-1Q8K198 168 aa8,92□□□□□ -0,98
Upf1-201ENSMUST00000075666 Krtap19-5O08632 62 aa8,92□□□□□ -0,98
Upf1-201ENSMUST00000075666 BsnO88737 3942 aa8,91□□□□□ -0,98
Upf1-201ENSMUST00000075666 Dnah10D3YYQ8 4591 aa8,89□□□□□ -0,99
Upf1-201ENSMUST00000075666 Dnah17Q69Z23 4481 aa8,79□□□□□ -1
Upf1-201ENSMUST00000075666 Huwe1Q7TMY8 4377 aaKnown RBP8,78□□□□□ -1
Upf1-201ENSMUST00000075666 Krtap7-1Q9D3I6 87 aa8,69□□□□□ -1,02
Upf1-201ENSMUST00000075666 Gm10318A0A1W2P728 225 aa8,67□□□□□ -1,02
Upf1-201ENSMUST00000075666 Dnah5Q8VHE6 4621 aa8,65□□□□□ -1,02
Upf1-201ENSMUST00000075666 Dnah7bL7N1Y0 4068 aa8,64□□□□□ -1,03
Upf1-201ENSMUST00000075666 Gm19668J3QMD1 248 aa8,63□□□□□ -1,03
Upf1-201ENSMUST00000075666 Dnah11E9Q7N9 4488 aa8,58□□□□□ -1,04
Upf1-201ENSMUST00000075666 PlecQ9QXS1 4691 aaKnown RBP8,53□□□□□ -1,04
Upf1-201ENSMUST00000075666 Vps13dB1ART2 4390 aa8,49□□□□□ -1,05
Upf1-201ENSMUST00000075666 Dnah9B1AR51 4484 aa8,47□□□□□ -1,05
Upf1-201ENSMUST00000075666 Stard9Q80TF6 4561 aa8,46□□□□□ -1,06
Upf1-201ENSMUST00000075666 Crct1Q6PAI5 102 aa8,44□□□□□ -1,06
Upf1-201ENSMUST00000075666 Sprr2a3Q4KL71 83 aa8,39□□□□□ -1,07
Upf1-201ENSMUST00000075666 Sprr2a1Q9CQK8 83 aa8,39□□□□□ -1,07
Upf1-201ENSMUST00000075666 Lrp1bQ9JI18 4599 aa8,3□□□□□ -1,08
Upf1-201ENSMUST00000075666 Krtap1-5A2A590 122 aa8,3□□□□□ -1,08
Upf1-201ENSMUST00000075666 Gm19402J3QJV4 266 aa8,29□□□□□ -1,08
Upf1-201ENSMUST00000075666 ApobE9Q414 4505 aa8,26□□□□□ -1,09
Upf1-201ENSMUST00000075666 Dnah3Q8BW94 4083 aa8,26□□□□□ -1,09
Retrieved 100 of 22,080 RNA–protein pairs in 55,1 ms