RNA–Protein interactions for RNA: ENSMUST00000062292.4

Foxc1-201, Transcript of Forkhead box protein C1, mousemouse

APPRIS P1 BASIC

Gene Foxc1, Length 5,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1-201ENSMUST00000062292 Celsr1O35161 3034 aa11.96□□□□□ -0.5
Foxc1-201ENSMUST00000062292 ApcQ61315 2845 aa11.91□□□□□ -0.5
Foxc1-201ENSMUST00000062292 BptfA2A654 3036 aaKnown RBP11.91□□□□□ -0.5
Foxc1-201ENSMUST00000062292 Lrrc37aB1AWG4 3215 aa11.88□□□□□ -0.51
Foxc1-201ENSMUST00000062292 Utp20Q5XG71 2788 aaKnown RBP11.85□□□□□ -0.51
Foxc1-201ENSMUST00000062292 Igfn1Q3KNY0 2849 aa11.85□□□□□ -0.51
Foxc1-201ENSMUST00000062292 FrylF8VQ05 3007 aa11.82□□□□□ -0.52
Foxc1-201ENSMUST00000062292 Zfhx3Q61329 3726 aa11.81□□□□□ -0.52
Foxc1-201ENSMUST00000062292 AspmQ8CJ27 3122 aa11.81□□□□□ -0.52
Foxc1-201ENSMUST00000062292 Brca2P97929 3329 aa11.8□□□□□ -0.52
Foxc1-201ENSMUST00000062292 FryE9Q8I9 3020 aa11.78□□□□□ -0.52
Foxc1-201ENSMUST00000062292 Lama1P19137 3084 aa11.78□□□□□ -0.52
Foxc1-201ENSMUST00000062292 2310079G19RikQ9D6L6 185 aa11.74□□□□□ -0.53
Foxc1-201ENSMUST00000062292 Tenm4Q3UHK6 2771 aa11.68□□□□□ -0.54
Foxc1-201ENSMUST00000062292 Gm17416Q30KP4 66 aa11.68□□□□□ -0.54
Foxc1-201ENSMUST00000062292 Adgrg4B7ZCC9 3073 aa11.66□□□□□ -0.54
Foxc1-201ENSMUST00000062292 Wdfy4E9Q2M9 3149 aa11.6□□□□□ -0.55
Foxc1-201ENSMUST00000062292 Gm9736A0A1W2P7N1 277 aa11.59□□□□□ -0.55
Foxc1-201ENSMUST00000062292 Prm2P07978 107 aa11.59□□□□□ -0.55
Foxc1-201ENSMUST00000062292 Gm9918Q8BUR5 174 aa11.57□□□□□ -0.56
Foxc1-201ENSMUST00000062292 Dchs2A0A0A6YW72 3346 aa11.54□□□□□ -0.56
Foxc1-201ENSMUST00000062292 Zzef1Q5SSH7 2924 aa11.53□□□□□ -0.56
Foxc1-201ENSMUST00000062292 Pdzd2E9Q1M1 2796 aa11.51□□□□□ -0.57
Foxc1-201ENSMUST00000062292 2210017I01RikA0A0A6YVV1 95 aa11.5□□□□□ -0.57
Foxc1-201ENSMUST00000062292 DspE9Q557 2883 aaKnown RBP11.48□□□□□ -0.57
Foxc1-201ENSMUST00000062292 Wdfy3Q6VNB8 3508 aa11.46□□□□□ -0.57
Foxc1-201ENSMUST00000062292 Gm17402F6Z0L5 76 aa11.43□□□□□ -0.58
Foxc1-201ENSMUST00000062292 Dmxl2Q8BPN8 3032 aa11.43□□□□□ -0.58
Foxc1-201ENSMUST00000062292 Col6a3E9PWQ3 3284 aa11.42□□□□□ -0.58
Foxc1-201ENSMUST00000062292 FlncQ8VHX6 2726 aaKnown RBP11.38□□□□□ -0.59
Foxc1-201ENSMUST00000062292 NbeaQ9EPN1 2936 aa11.37□□□□□ -0.59
Foxc1-201ENSMUST00000062292 Vps13cQ8BX70 3748 aa11.34□□□□□ -0.59
Foxc1-201ENSMUST00000062292 Myo15aQ9QZZ4 3511 aa11.32□□□□□ -0.6
Foxc1-201ENSMUST00000062292 Celsr2Q9R0M0 2920 aa11.29□□□□□ -0.6
Foxc1-201ENSMUST00000062292 LrbaQ9ESE1 2856 aa11.28□□□□□ -0.6
Foxc1-201ENSMUST00000062292 VcanQ62059 3357 aa11.27□□□□□ -0.6
Foxc1-201ENSMUST00000062292 Nf1Q04690 2841 aa11.26□□□□□ -0.61
Foxc1-201ENSMUST00000062292 Dchs1E9PVD3 3291 aa11.23□□□□□ -0.61
Foxc1-201ENSMUST00000062292 SpegQ62407 3262 aa11.22□□□□□ -0.61
Foxc1-201ENSMUST00000062292 Tenm1Q9WTS4 2731 aa11.22□□□□□ -0.61
Foxc1-201ENSMUST00000062292 RelnQ60841 3461 aa11.19□□□□□ -0.62
Foxc1-201ENSMUST00000062292 Gm19668J3QMD1 248 aa11.15□□□□□ -0.62
Foxc1-201ENSMUST00000062292 Tenm3Q9WTS6 2715 aa11.14□□□□□ -0.63
Foxc1-201ENSMUST00000062292 Trank1Q8BV79 2999 aa11.13□□□□□ -0.63
Foxc1-201ENSMUST00000062292 Gm10318A0A1W2P728 225 aa11.13□□□□□ -0.63
Foxc1-201ENSMUST00000062292 Tenm2Q9WTS5 2764 aa11.12□□□□□ -0.63
Foxc1-201ENSMUST00000062292 Chd9Q8BYH8 2885 aa11.1□□□□□ -0.63
Foxc1-201ENSMUST00000062292 Megf8P60882 2789 aa11.1□□□□□ -0.63
Foxc1-201ENSMUST00000062292 Akap9Q70FJ1 3797 aa11.09□□□□□ -0.63
Foxc1-201ENSMUST00000062292 4933428G20RikQ9D3X4 101 aa11.08□□□□□ -0.64
Foxc1-201ENSMUST00000062292 Csmd1Q923L3 3564 aa11.07□□□□□ -0.64
Foxc1-201ENSMUST00000062292 DmdP11531 3678 aa11.06□□□□□ -0.64
Foxc1-201ENSMUST00000062292 Gm11939A2A592 99 aa10.88□□□□□ -0.67
Foxc1-201ENSMUST00000062292 Krtap13-1Q8K198 168 aa10.88□□□□□ -0.67
Foxc1-201ENSMUST00000062292 Crct1Q6PAI5 102 aa10.86□□□□□ -0.67
Foxc1-201ENSMUST00000062292 Krtap19-5O08632 62 aa10.79□□□□□ -0.68
Foxc1-201ENSMUST00000062292 Smg1Q8BKX6 3658 aaKnown RBP10.73□□□□□ -0.69
Foxc1-201ENSMUST00000062292 SpenQ62504 3644 aaKnown RBP10.71□□□□□ -0.69
Foxc1-201ENSMUST00000062292 Helz2E9QAM5 2947 aaKnown RBP10.68□□□□□ -0.7
Foxc1-201ENSMUST00000062292 Muc5acE9QAQ8 3455 aa10.61□□□□□ -0.71
Foxc1-201ENSMUST00000062292 Gm884A2A9H6 3643 aa10.59□□□□□ -0.71
Foxc1-201ENSMUST00000062292 Krtap3-1A2A591 98 aa10.57□□□□□ -0.72
Foxc1-201ENSMUST00000062292 Lama5Q61001 3718 aa10.5□□□□□ -0.73
Foxc1-201ENSMUST00000062292 Zfhx4Q9JJN2 3550 aa10.49□□□□□ -0.73
Foxc1-201ENSMUST00000062292 Krtap3-2Q9D638 99 aa10.4□□□□□ -0.74
Foxc1-201ENSMUST00000062292 Krtap3-3Q9D7P0 99 aa10.4□□□□□ -0.74
Foxc1-201ENSMUST00000062292 VwfQ8CIZ8 2813 aa10.35□□□□□ -0.75
Foxc1-201ENSMUST00000062292 OtogO55225 2910 aa10.35□□□□□ -0.75
Foxc1-201ENSMUST00000062292 Gm6358A0A087WPH4 74 aa10.32□□□□□ -0.76
Foxc1-201ENSMUST00000062292 Cmya5Q70KF4 3739 aa10.28□□□□□ -0.76
Foxc1-201ENSMUST00000062292 Svep1A2AVA0 3567 aa10.14□□□□□ -0.79
Foxc1-201ENSMUST00000062292 Ank2Q8C8R3 3898 aa9.95□□□□□ -0.82
Foxc1-201ENSMUST00000062292 Krtap8-1O08633 61 aa9.94□□□□□ -0.82
Foxc1-201ENSMUST00000062292 Krtap7-1Q9D3I6 87 aa9.92□□□□□ -0.82
Foxc1-201ENSMUST00000062292 Fbn1Q61554 2873 aaKnown RBP9.88□□□□□ -0.83
Foxc1-201ENSMUST00000062292 Krtap19-9aF8WH65 55 aa9.88□□□□□ -0.83
Foxc1-201ENSMUST00000062292 Krtap1-5A2A590 122 aa9.87□□□□□ -0.83
Foxc1-201ENSMUST00000062292 Sprr2a3Q4KL71 83 aa9.84□□□□□ -0.83
Foxc1-201ENSMUST00000062292 Sprr2a1Q9CQK8 83 aa9.84□□□□□ -0.83
Foxc1-201ENSMUST00000062292 Sprr2kO70562 68 aa9.78□□□□□ -0.84
Foxc1-201ENSMUST00000062292 Muc4Q8JZM8 3443 aa9.71□□□□□ -0.86
Foxc1-201ENSMUST00000062292 Col7a1Q63870 2944 aa9.66□□□□□ -0.86
Foxc1-201ENSMUST00000062292 Csmd2V9GX34 3611 aa9.65□□□□□ -0.86
Foxc1-201ENSMUST00000062292 Krtap1-4Q3V2D6 188 aa9.65□□□□□ -0.86
Foxc1-201ENSMUST00000062292 Krtap19-9bQ99NG9 58 aa9.61□□□□□ -0.87
Foxc1-201ENSMUST00000062292 LorP18165 486 aa9.61□□□□□ -0.87
Foxc1-201ENSMUST00000062292 Gm18596A0A1W2P860 280 aa9.58□□□□□ -0.88
Foxc1-201ENSMUST00000062292 Dnah14A0A140LIJ4 4489 aa9.53□□□□□ -0.88
Foxc1-201ENSMUST00000062292 Huwe1Q7TMY8 4377 aaKnown RBP9.42□□□□□ -0.9
Foxc1-201ENSMUST00000062292 LystP97412 3788 aa9.41□□□□□ -0.9
Foxc1-201ENSMUST00000062292 Krtap12-1Q9Z287 130 aa9.36□□□□□ -0.91
Foxc1-201ENSMUST00000062292 Gm19402J3QJV4 266 aa9.34□□□□□ -0.91
Foxc1-201ENSMUST00000062292 Muc6Q80T03 2850 aa9.33□□□□□ -0.92
Foxc1-201ENSMUST00000062292 Dnah10D3YYQ8 4591 aa9.29□□□□□ -0.92
Foxc1-201ENSMUST00000062292 Sprr2gO70558 76 aa9.26□□□□□ -0.93
Foxc1-201ENSMUST00000062292 Dnah5Q8VHE6 4621 aa9.21□□□□□ -0.93
Foxc1-201ENSMUST00000062292 CubnQ9JLB4 3623 aa9.14□□□□□ -0.95
Foxc1-201ENSMUST00000062292 Dnah17Q69Z23 4481 aa9.14□□□□□ -0.95
Foxc1-201ENSMUST00000062292 Stard9Q80TF6 4561 aa9.09□□□□□ -0.95
Foxc1-201ENSMUST00000062292 Hspg2Q05793 3707 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms