RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Gm2310J3QNJ2 377 aa9,02□□□□□ -0,97
Ubr3-201ENSMUST00000055758 Krtap14O08640 167 aa9,01□□□□□ -0,97
Ubr3-201ENSMUST00000055758 Col6a5A6H584 2640 aa8,99□□□□□ -0,97
Ubr3-201ENSMUST00000055758 Itpr1P11881 2749 aa8,99□□□□□ -0,97
Ubr3-201ENSMUST00000055758 Srrm2Q8BTI8 2703 aaKnown RBP8,97□□□□□ -0,97
Ubr3-201ENSMUST00000055758 Dchs1E9PVD3 3291 aa8,94□□□□□ -0,98
Ubr3-201ENSMUST00000055758 LrbaQ9ESE1 2856 aa8,92□□□□□ -0,98
Ubr3-201ENSMUST00000055758 RelnQ60841 3461 aa8,92□□□□□ -0,98
Ubr3-201ENSMUST00000055758 Cmya5Q70KF4 3739 aa8,9□□□□□ -0,98
Ubr3-201ENSMUST00000055758 Gm40193A0A1B0GT39 78 aa8,88□□□□□ -0,99
Ubr3-201ENSMUST00000055758 Csmd1Q923L3 3564 aa8,88□□□□□ -0,99
Ubr3-201ENSMUST00000055758 Gm11565A2A4M7 156 aa8,85□□□□□ -0,99
Ubr3-201ENSMUST00000055758 Gm9507D3Z5T3 223 aa8,85□□□□□ -0,99
Ubr3-201ENSMUST00000055758 Adgrg4B7ZCC9 3073 aa8,85□□□□□ -0,99
Ubr3-201ENSMUST00000055758 DmdP11531 3678 aa8,82□□□□□ -1
Ubr3-201ENSMUST00000055758 NbeaQ9EPN1 2936 aa8,81□□□□□ -1
Ubr3-201ENSMUST00000055758 Vps13cQ8BX70 3748 aa8,8□□□□□ -1
Ubr3-201ENSMUST00000055758 Krtap10-4Q08EG8 221 aa8,79□□□□□ -1
Ubr3-201ENSMUST00000055758 D6Ertd527eA0A0N4SWI3 464 aa8,76□□□□□ -1,01
Ubr3-201ENSMUST00000055758 Prm2P07978 107 aa8,76□□□□□ -1,01
Ubr3-201ENSMUST00000055758 TgO08710 2766 aa8,73□□□□□ -1,01
Ubr3-201ENSMUST00000055758 Muc2Q80Z19 2680 aa8,73□□□□□ -1,01
Ubr3-201ENSMUST00000055758 Igfn1Q3KNY0 2849 aa8,71□□□□□ -1,01
Ubr3-201ENSMUST00000055758 SpenQ62504 3644 aaKnown RBP8,71□□□□□ -1,02
Ubr3-201ENSMUST00000055758 Nf1Q04690 2841 aa8,67□□□□□ -1,02
Ubr3-201ENSMUST00000055758 Krtap10-10A0A1W2P7T6 217 aa8,66□□□□□ -1,02
Ubr3-201ENSMUST00000055758 Smg1Q8BKX6 3658 aaKnown RBP8,63□□□□□ -1,03
Ubr3-201ENSMUST00000055758 Tenm3Q9WTS6 2715 aa8,61□□□□□ -1,03
Ubr3-201ENSMUST00000055758 Rps29P62274 56 aa8,6□□□□□ -1,03
Ubr3-201ENSMUST00000055758 Celsr2Q9R0M0 2920 aa8,6□□□□□ -1,03
Ubr3-201ENSMUST00000055758 Zfhx4Q9JJN2 3550 aa8,59□□□□□ -1,03
Ubr3-201ENSMUST00000055758 Gm5965D3Z724 196 aa8,56□□□□□ -1,04
Ubr3-201ENSMUST00000055758 2310061N02RikQ9D6S9 174 aa8,56□□□□□ -1,04
Ubr3-201ENSMUST00000055758 FcgbpE9Q0B5 2583 aa8,55□□□□□ -1,04
Ubr3-201ENSMUST00000055758 Hivep1Q03172 2688 aa8,54□□□□□ -1,04
Ubr3-201ENSMUST00000055758 Tnp2P11378 117 aa8,53□□□□□ -1,04
Ubr3-201ENSMUST00000055758 2310057N15RikQ9D6T8 200 aa8,52□□□□□ -1,04
Ubr3-201ENSMUST00000055758 Gm20537G3UYK7 97 aa8,51□□□□□ -1,05
Ubr3-201ENSMUST00000055758 Tenm1Q9WTS4 2731 aa8,49□□□□□ -1,05
Ubr3-201ENSMUST00000055758 FlncQ8VHX6 2726 aaKnown RBP8,42□□□□□ -1,06
Ubr3-201ENSMUST00000055758 Gm884A2A9H6 3643 aa8,42□□□□□ -1,06
Ubr3-201ENSMUST00000055758 Pdzd2E9Q1M1 2796 aa8,41□□□□□ -1,06
Ubr3-201ENSMUST00000055758 Gm2696A0A1W2P709 240 aa8,39□□□□□ -1,07
Ubr3-201ENSMUST00000055758 B930094E09RikQ8C4T2 136 aa8,34□□□□□ -1,07
Ubr3-201ENSMUST00000055758 Csmd2V9GX34 3611 aa8,31□□□□□ -1,08
Ubr3-201ENSMUST00000055758 Muc5acE9QAQ8 3455 aa8,27□□□□□ -1,09
Ubr3-201ENSMUST00000055758 4933428G20RikQ9D3X4 101 aa8,27□□□□□ -1,09
Ubr3-201ENSMUST00000055758 Lama5Q61001 3718 aa8,25□□□□□ -1,09
Ubr3-201ENSMUST00000055758 Helz2E9QAM5 2947 aaKnown RBP8,15□□□□□ -1,1
Ubr3-201ENSMUST00000055758 Gm9918Q8BUR5 174 aa8,1□□□□□ -1,11
Ubr3-201ENSMUST00000055758 Ank2Q8C8R3 3898 aa8,08□□□□□ -1,12
Ubr3-201ENSMUST00000055758 Tenm4Q3UHK6 2771 aa8,07□□□□□ -1,12
Ubr3-201ENSMUST00000055758 OtogO55225 2910 aa8,06□□□□□ -1,12
Ubr3-201ENSMUST00000055758 Megf8P60882 2789 aa8,05□□□□□ -1,12
Ubr3-201ENSMUST00000055758 2310079G19RikQ9D6L6 185 aa8,02□□□□□ -1,13
Ubr3-201ENSMUST00000055758 VwfQ8CIZ8 2813 aa7,99□□□□□ -1,13
Ubr3-201ENSMUST00000055758 A930033H14RikG5E8X6 103 aa7,93□□□□□ -1,14
Ubr3-201ENSMUST00000055758 Fbn1Q61554 2873 aaKnown RBP7,86□□□□□ -1,15
Ubr3-201ENSMUST00000055758 Tenm2Q9WTS5 2764 aa7,83□□□□□ -1,16
Ubr3-201ENSMUST00000055758 Csmd3Q80T79 3707 aa7,8□□□□□ -1,16
Ubr3-201ENSMUST00000055758 LystP97412 3788 aa7,79□□□□□ -1,16
Ubr3-201ENSMUST00000055758 Gm9736A0A1W2P7N1 277 aa7,7□□□□□ -1,18
Ubr3-201ENSMUST00000055758 CubnQ9JLB4 3623 aa7,69□□□□□ -1,18
Ubr3-201ENSMUST00000055758 Gm17402F6Z0L5 76 aa7,69□□□□□ -1,18
Ubr3-201ENSMUST00000055758 Gm17416Q30KP4 66 aa7,67□□□□□ -1,18
Ubr3-201ENSMUST00000055758 Hspg2Q05793 3707 aaKnown RBP7,65□□□□□ -1,18
Ubr3-201ENSMUST00000055758 Gm19668J3QMD1 248 aa7,63□□□□□ -1,19
Ubr3-201ENSMUST00000055758 Xirp2Q4U4S6 3784 aa7,63□□□□□ -1,19
Ubr3-201ENSMUST00000055758 2210017I01RikA0A0A6YVV1 95 aa7,62□□□□□ -1,19
Ubr3-201ENSMUST00000055758 Gm10318A0A1W2P728 225 aa7,54□□□□□ -1,2
Ubr3-201ENSMUST00000055758 Muc4Q8JZM8 3443 aa7,51□□□□□ -1,21
Ubr3-201ENSMUST00000055758 Col7a1Q63870 2944 aa7,51□□□□□ -1,21
Ubr3-201ENSMUST00000055758 Svep1A2AVA0 3567 aa7,47□□□□□ -1,21
Ubr3-201ENSMUST00000055758 BsnO88737 3942 aa7,45□□□□□ -1,22
Ubr3-201ENSMUST00000055758 Muc6Q80T03 2850 aa7,38□□□□□ -1,23
Ubr3-201ENSMUST00000055758 Gm6358A0A087WPH4 74 aa7,29□□□□□ -1,24
Ubr3-201ENSMUST00000055758 Crct1Q6PAI5 102 aa7,26□□□□□ -1,25
Ubr3-201ENSMUST00000055758 Krtap13-1Q8K198 168 aa7,26□□□□□ -1,25
Ubr3-201ENSMUST00000055758 Gm18596A0A1W2P860 280 aa7,23□□□□□ -1,25
Ubr3-201ENSMUST00000055758 Gm11939A2A592 99 aa7,2□□□□□ -1,26
Ubr3-201ENSMUST00000055758 Vps13bQ80TY5 3993 aa7,18□□□□□ -1,26
Ubr3-201ENSMUST00000055758 Krtap3-1A2A591 98 aa7,08□□□□□ -1,28
Ubr3-201ENSMUST00000055758 Gm19402J3QJV4 266 aa6,98□□□□□ -1,29
Ubr3-201ENSMUST00000055758 Krtap3-2Q9D638 99 aa6,98□□□□□ -1,29
Ubr3-201ENSMUST00000055758 Krtap3-3Q9D7P0 99 aa6,98□□□□□ -1,29
Ubr3-201ENSMUST00000055758 Krtap19-5O08632 62 aa6,96□□□□□ -1,29
Ubr3-201ENSMUST00000055758 Krtap7-1Q9D3I6 87 aa6,77□□□□□ -1,33
Ubr3-201ENSMUST00000055758 Sprr2kO70562 68 aa6,71□□□□□ -1,33
Ubr3-201ENSMUST00000055758 Dnah3Q8BW94 4083 aa6,71□□□□□ -1,34
Ubr3-201ENSMUST00000055758 Dnah6E9Q0B6 4144 aa6,63□□□□□ -1,35
Ubr3-201ENSMUST00000055758 Krtap8-1O08633 61 aa6,61□□□□□ -1,35
Ubr3-201ENSMUST00000055758 Sprr2a3Q4KL71 83 aa6,59□□□□□ -1,35
Ubr3-201ENSMUST00000055758 Sprr2a1Q9CQK8 83 aa6,59□□□□□ -1,35
Ubr3-201ENSMUST00000055758 Dnah7bL7N1Y0 4068 aa6,58□□□□□ -1,36
Ubr3-201ENSMUST00000055758 Kmt2aP55200 3966 aa6,57□□□□□ -1,36
Ubr3-201ENSMUST00000055758 Krtap19-9aF8WH65 55 aa6,54□□□□□ -1,36
Ubr3-201ENSMUST00000055758 Dnah7cA0A087WR13 4024 aa6,54□□□□□ -1,36
Ubr3-201ENSMUST00000055758 Dnah7aE9Q0T8 4024 aa6,53□□□□□ -1,36
Ubr3-201ENSMUST00000055758 Huwe1Q7TMY8 4377 aaKnown RBP6,5□□□□□ -1,37
Ubr3-201ENSMUST00000055758 Krtap12-1Q9Z287 130 aa6,47□□□□□ -1,37
Retrieved 100 of 22,080 RNA–protein pairs in 39,7 ms