RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Krtap13O88375 197 aa6.65□□□□□ -1.34
Pcdhb17-201ENSMUST00000053856 Tnp2P11378 117 aa6.65□□□□□ -1.35
Pcdhb17-201ENSMUST00000053856 BC029722A0A0N4SW31 51 aa6.63□□□□□ -1.35
Pcdhb17-201ENSMUST00000053856 LrbaQ9ESE1 2856 aa6.62□□□□□ -1.35
Pcdhb17-201ENSMUST00000053856 Gm19426M0QWC7 77 aa6.59□□□□□ -1.35
Pcdhb17-201ENSMUST00000053856 Krtap14O08640 167 aa6.58□□□□□ -1.36
Pcdhb17-201ENSMUST00000053856 Camk2n1Q6QWF9 78 aa6.58□□□□□ -1.36
Pcdhb17-201ENSMUST00000053856 DmdP11531 3678 aa6.57□□□□□ -1.36
Pcdhb17-201ENSMUST00000053856 Tenm3Q9WTS6 2715 aa6.55□□□□□ -1.36
Pcdhb17-201ENSMUST00000053856 Rpl37Q9D823 97 aa6.55□□□□□ -1.36
Pcdhb17-201ENSMUST00000053856 Pdzd2E9Q1M1 2796 aa6.53□□□□□ -1.36
Pcdhb17-201ENSMUST00000053856 FcgbpE9Q0B5 2583 aa6.52□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 Gm2310J3QNJ2 377 aa6.52□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 Akap9Q70FJ1 3797 aa6.51□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 Romo1P60603 79 aa6.5□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 Tenm4Q3UHK6 2771 aa6.49□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 Gm9507D3Z5T3 223 aa6.48□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 Helz2E9QAM5 2947 aaKnown RBP6.47□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 ApcQ61315 2845 aa6.47□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 TgO08710 2766 aa6.46□□□□□ -1.37
Pcdhb17-201ENSMUST00000053856 Srrm2Q8BTI8 2703 aaKnown RBP6.45□□□□□ -1.38
Pcdhb17-201ENSMUST00000053856 D6Ertd527eA0A0N4SWI3 464 aa6.44□□□□□ -1.38
Pcdhb17-201ENSMUST00000053856 Gm10382Q3V0T5 144 aa6.43□□□□□ -1.38
Pcdhb17-201ENSMUST00000053856 Muc5acE9QAQ8 3455 aa6.41□□□□□ -1.38
Pcdhb17-201ENSMUST00000053856 Vps13cQ8BX70 3748 aa6.38□□□□□ -1.39
Pcdhb17-201ENSMUST00000053856 Cox6b2Q80ZN9 88 aa6.34□□□□□ -1.4
Pcdhb17-201ENSMUST00000053856 Zfhx3Q61329 3726 aa6.33□□□□□ -1.4
Pcdhb17-201ENSMUST00000053856 SpenQ62504 3644 aaKnown RBP6.3□□□□□ -1.4
Pcdhb17-201ENSMUST00000053856 Krtap10-4Q08EG8 221 aa6.28□□□□□ -1.4
Pcdhb17-201ENSMUST00000053856 Smg1Q8BKX6 3658 aaKnown RBP6.26□□□□□ -1.41
Pcdhb17-201ENSMUST00000053856 Csmd1Q923L3 3564 aa6.26□□□□□ -1.41
Pcdhb17-201ENSMUST00000053856 Zfhx4Q9JJN2 3550 aa6.26□□□□□ -1.41
Pcdhb17-201ENSMUST00000053856 OtogO55225 2910 aa6.24□□□□□ -1.41
Pcdhb17-201ENSMUST00000053856 A930033H14RikG5E8X6 103 aa6.23□□□□□ -1.41
Pcdhb17-201ENSMUST00000053856 Lama5Q61001 3718 aa6.2□□□□□ -1.42
Pcdhb17-201ENSMUST00000053856 Tenm1Q9WTS4 2731 aa6.2□□□□□ -1.42
Pcdhb17-201ENSMUST00000053856 Krtap10-10A0A1W2P7T6 217 aa6.2□□□□□ -1.42
Pcdhb17-201ENSMUST00000053856 Gm2696A0A1W2P709 240 aa6.13□□□□□ -1.43
Pcdhb17-201ENSMUST00000053856 Ndufaf8A2AMZ4 74 aa6.1□□□□□ -1.43
Pcdhb17-201ENSMUST00000053856 Gm5965D3Z724 196 aa6.07□□□□□ -1.44
Pcdhb17-201ENSMUST00000053856 Gm17416Q30KP4 66 aa6.06□□□□□ -1.44
Pcdhb17-201ENSMUST00000053856 Gm884A2A9H6 3643 aa6.02□□□□□ -1.45
Pcdhb17-201ENSMUST00000053856 Gm21887J3QQ04 176 aa6□□□□□ -1.45
Pcdhb17-201ENSMUST00000053856 Muc4Q8JZM8 3443 aa5.97□□□□□ -1.45
Pcdhb17-201ENSMUST00000053856 Svep1A2AVA0 3567 aa5.97□□□□□ -1.45
Pcdhb17-201ENSMUST00000053856 Tenm2Q9WTS5 2764 aa5.97□□□□□ -1.45
Pcdhb17-201ENSMUST00000053856 Fbn1Q61554 2873 aaKnown RBP5.96□□□□□ -1.46
Pcdhb17-201ENSMUST00000053856 Gm20537G3UYK7 97 aa5.96□□□□□ -1.46
Pcdhb17-201ENSMUST00000053856 Gm40193A0A1B0GT39 78 aa5.95□□□□□ -1.46
Pcdhb17-201ENSMUST00000053856 VwfQ8CIZ8 2813 aa5.95□□□□□ -1.46
Pcdhb17-201ENSMUST00000053856 Col7a1Q63870 2944 aa5.92□□□□□ -1.46
Pcdhb17-201ENSMUST00000053856 Tnp1P10856 55 aa5.9□□□□□ -1.46
Pcdhb17-201ENSMUST00000053856 Gm9112A2AI92 75 aa5.9□□□□□ -1.47
Pcdhb17-201ENSMUST00000053856 2310057N15RikQ9D6T8 200 aa5.88□□□□□ -1.47
Pcdhb17-201ENSMUST00000053856 2310079G19RikQ9D6L6 185 aa5.86□□□□□ -1.47
Pcdhb17-201ENSMUST00000053856 Cmya5Q70KF4 3739 aa5.85□□□□□ -1.47
Pcdhb17-201ENSMUST00000053856 2210017I01RikA0A0A6YVV1 95 aa5.84□□□□□ -1.48
Pcdhb17-201ENSMUST00000053856 Gm17402F6Z0L5 76 aa5.84□□□□□ -1.48
Pcdhb17-201ENSMUST00000053856 B930094E09RikQ8C4T2 136 aa5.75□□□□□ -1.49
Pcdhb17-201ENSMUST00000053856 Megf8P60882 2789 aa5.72□□□□□ -1.49
Pcdhb17-201ENSMUST00000053856 Muc6Q80T03 2850 aa5.72□□□□□ -1.49
Pcdhb17-201ENSMUST00000053856 Csmd2V9GX34 3611 aa5.67□□□□□ -1.5
Pcdhb17-201ENSMUST00000053856 Krtap19-5O08632 62 aa5.61□□□□□ -1.51
Pcdhb17-201ENSMUST00000053856 Ank2Q8C8R3 3898 aa5.56□□□□□ -1.52
Pcdhb17-201ENSMUST00000053856 Gm11939A2A592 99 aa5.53□□□□□ -1.52
Pcdhb17-201ENSMUST00000053856 Gm9736A0A1W2P7N1 277 aa5.52□□□□□ -1.53
Pcdhb17-201ENSMUST00000053856 CubnQ9JLB4 3623 aa5.51□□□□□ -1.53
Pcdhb17-201ENSMUST00000053856 Prm2P07978 107 aa5.5□□□□□ -1.53
Pcdhb17-201ENSMUST00000053856 Gm9918Q8BUR5 174 aa5.49□□□□□ -1.53
Pcdhb17-201ENSMUST00000053856 LystP97412 3788 aa5.47□□□□□ -1.53
Pcdhb17-201ENSMUST00000053856 Gm19668J3QMD1 248 aa5.38□□□□□ -1.55
Pcdhb17-201ENSMUST00000053856 Krtap13-1Q8K198 168 aa5.36□□□□□ -1.55
Pcdhb17-201ENSMUST00000053856 Krtap3-2Q9D638 99 aa5.33□□□□□ -1.56
Pcdhb17-201ENSMUST00000053856 Krtap3-3Q9D7P0 99 aa5.33□□□□□ -1.56
Pcdhb17-201ENSMUST00000053856 Dnah14A0A140LIJ4 4489 aa5.28□□□□□ -1.56
Pcdhb17-201ENSMUST00000053856 4933428G20RikQ9D3X4 101 aa5.23□□□□□ -1.57
Pcdhb17-201ENSMUST00000053856 Krtap3-1A2A591 98 aa5.21□□□□□ -1.58
Pcdhb17-201ENSMUST00000053856 Xirp2Q4U4S6 3784 aa5.17□□□□□ -1.58
Pcdhb17-201ENSMUST00000053856 Hspg2Q05793 3707 aaKnown RBP5.11□□□□□ -1.59
Pcdhb17-201ENSMUST00000053856 Gm10318A0A1W2P728 225 aa5.11□□□□□ -1.59
Pcdhb17-201ENSMUST00000053856 BsnO88737 3942 aa5.11□□□□□ -1.59
Pcdhb17-201ENSMUST00000053856 Krtap1-5A2A590 122 aa5.09□□□□□ -1.6
Pcdhb17-201ENSMUST00000053856 Csmd3Q80T79 3707 aa5.08□□□□□ -1.6
Pcdhb17-201ENSMUST00000053856 Dnah10D3YYQ8 4591 aa5.08□□□□□ -1.6
Pcdhb17-201ENSMUST00000053856 Huwe1Q7TMY8 4377 aaKnown RBP5.08□□□□□ -1.6
Pcdhb17-201ENSMUST00000053856 Crct1Q6PAI5 102 aa5.04□□□□□ -1.6
Pcdhb17-201ENSMUST00000053856 Gm18596A0A1W2P860 280 aa5.02□□□□□ -1.61
Pcdhb17-201ENSMUST00000053856 Dnah5Q8VHE6 4621 aa5□□□□□ -1.61
Pcdhb17-201ENSMUST00000053856 Krtap19-9aF8WH65 55 aa4.99□□□□□ -1.61
Pcdhb17-201ENSMUST00000053856 PlecQ9QXS1 4691 aaKnown RBP4.93□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Krtap8-1O08633 61 aa4.93□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Krtap4-1Q3UUY3 169 aa4.92□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Stard9Q80TF6 4561 aa4.92□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Dnah17Q69Z23 4481 aa4.92□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Sprr2a3Q4KL71 83 aa4.91□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Sprr2a1Q9CQK8 83 aa4.91□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Vps13dB1ART2 4390 aa4.91□□□□□ -1.62
Pcdhb17-201ENSMUST00000053856 Krtap1-4Q3V2D6 188 aa4.88□□□□□ -1.63
Pcdhb17-201ENSMUST00000053856 Krtap7-1Q9D3I6 87 aa4.87□□□□□ -1.63
Pcdhb17-201ENSMUST00000053856 Dnah7bL7N1Y0 4068 aa4.86□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms