RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 LrbaQ9ESE1 2856 aa6.23□□□□□ -1.41
Nipbl-201ENSMUST00000052965 Gm9112A2AI92 75 aa6.23□□□□□ -1.41
Nipbl-201ENSMUST00000052965 Sec61bQ9CQS8 96 aaKnown RBP6.21□□□□□ -1.41
Nipbl-201ENSMUST00000052965 Myo15aQ9QZZ4 3511 aa6.21□□□□□ -1.42
Nipbl-201ENSMUST00000052965 DmdP11531 3678 aa6.19□□□□□ -1.42
Nipbl-201ENSMUST00000052965 VcanQ62059 3357 aa6.19□□□□□ -1.42
Nipbl-201ENSMUST00000052965 Dchs1E9PVD3 3291 aa6.18□□□□□ -1.42
Nipbl-201ENSMUST00000052965 FcgbpE9Q0B5 2583 aa6.18□□□□□ -1.42
Nipbl-201ENSMUST00000052965 BC029722A0A0N4SW31 51 aa6.18□□□□□ -1.42
Nipbl-201ENSMUST00000052965 Wdfy3Q6VNB8 3508 aa6.17□□□□□ -1.42
Nipbl-201ENSMUST00000052965 Gm40193A0A1B0GT39 78 aa6.17□□□□□ -1.42
Nipbl-201ENSMUST00000052965 Gm17349F7BGH6 99 aa6.16□□□□□ -1.42
Nipbl-201ENSMUST00000052965 Gm7137J3QMW1 236 aa6.15□□□□□ -1.42
Nipbl-201ENSMUST00000052965 Krtap15-1Q9QZU5 150 aa6.15□□□□□ -1.43
Nipbl-201ENSMUST00000052965 SpegQ62407 3262 aa6.14□□□□□ -1.43
Nipbl-201ENSMUST00000052965 Rps29P62274 56 aa6.12□□□□□ -1.43
Nipbl-201ENSMUST00000052965 Gm5767A0A0J9YTU8 78 aa6.1□□□□□ -1.43
Nipbl-201ENSMUST00000052965 D6Ertd527eA0A0N4SWI3 464 aa6.1□□□□□ -1.43
Nipbl-201ENSMUST00000052965 Tenm3Q9WTS6 2715 aa6.1□□□□□ -1.43
Nipbl-201ENSMUST00000052965 2310050C09RikG5E8Z3 280 aa6.08□□□□□ -1.44
Nipbl-201ENSMUST00000052965 Gm9508A0A1W2P7W0 230 aa6.07□□□□□ -1.44
Nipbl-201ENSMUST00000052965 Tenm1Q9WTS4 2731 aa6.06□□□□□ -1.44
Nipbl-201ENSMUST00000052965 Helz2E9QAM5 2947 aaKnown RBP6.06□□□□□ -1.44
Nipbl-201ENSMUST00000052965 Gm36176A0A1W2P8D5 158 aa6.06□□□□□ -1.44
Nipbl-201ENSMUST00000052965 SpenQ62504 3644 aaKnown RBP6.04□□□□□ -1.44
Nipbl-201ENSMUST00000052965 Krtap13O88375 197 aa6.04□□□□□ -1.44
Nipbl-201ENSMUST00000052965 RelnQ60841 3461 aa6.01□□□□□ -1.45
Nipbl-201ENSMUST00000052965 Csmd1Q923L3 3564 aa5.99□□□□□ -1.45
Nipbl-201ENSMUST00000052965 Gm20537G3UYK7 97 aa5.98□□□□□ -1.45
Nipbl-201ENSMUST00000052965 2310061N02RikQ9D6S9 174 aa5.98□□□□□ -1.45
Nipbl-201ENSMUST00000052965 Tnp2P11378 117 aa5.96□□□□□ -1.46
Nipbl-201ENSMUST00000052965 Prm2P07978 107 aa5.95□□□□□ -1.46
Nipbl-201ENSMUST00000052965 Smg1Q8BKX6 3658 aaKnown RBP5.93□□□□□ -1.46
Nipbl-201ENSMUST00000052965 Cmya5Q70KF4 3739 aa5.92□□□□□ -1.46
Nipbl-201ENSMUST00000052965 Gm884A2A9H6 3643 aa5.9□□□□□ -1.47
Nipbl-201ENSMUST00000052965 Lama5Q61001 3718 aa5.89□□□□□ -1.47
Nipbl-201ENSMUST00000052965 Tenm4Q3UHK6 2771 aa5.89□□□□□ -1.47
Nipbl-201ENSMUST00000052965 Gm21887J3QQ04 176 aa5.89□□□□□ -1.47
Nipbl-201ENSMUST00000052965 OtogO55225 2910 aa5.87□□□□□ -1.47
Nipbl-201ENSMUST00000052965 Tnp1P10856 55 aa5.85□□□□□ -1.47
Nipbl-201ENSMUST00000052965 Ank2Q8C8R3 3898 aa5.84□□□□□ -1.48
Nipbl-201ENSMUST00000052965 Gm5965D3Z724 196 aa5.81□□□□□ -1.48
Nipbl-201ENSMUST00000052965 Zfhx4Q9JJN2 3550 aa5.81□□□□□ -1.48
Nipbl-201ENSMUST00000052965 Fbn1Q61554 2873 aaKnown RBP5.79□□□□□ -1.48
Nipbl-201ENSMUST00000052965 2310079G19RikQ9D6L6 185 aa5.79□□□□□ -1.48
Nipbl-201ENSMUST00000052965 Muc5acE9QAQ8 3455 aa5.78□□□□□ -1.48
Nipbl-201ENSMUST00000052965 Gm9507D3Z5T3 223 aa5.78□□□□□ -1.48
Nipbl-201ENSMUST00000052965 Megf8P60882 2789 aa5.76□□□□□ -1.49
Nipbl-201ENSMUST00000052965 A930033H14RikG5E8X6 103 aa5.76□□□□□ -1.49
Nipbl-201ENSMUST00000052965 2310057N15RikQ9D6T8 200 aa5.75□□□□□ -1.49
Nipbl-201ENSMUST00000052965 B930094E09RikQ8C4T2 136 aa5.71□□□□□ -1.49
Nipbl-201ENSMUST00000052965 VwfQ8CIZ8 2813 aa5.7□□□□□ -1.5
Nipbl-201ENSMUST00000052965 Krtap10-4Q08EG8 221 aa5.65□□□□□ -1.51
Nipbl-201ENSMUST00000052965 Tenm2Q9WTS5 2764 aa5.59□□□□□ -1.51
Nipbl-201ENSMUST00000052965 Csmd2V9GX34 3611 aa5.55□□□□□ -1.52
Nipbl-201ENSMUST00000052965 Krtap10-10A0A1W2P7T6 217 aa5.55□□□□□ -1.52
Nipbl-201ENSMUST00000052965 Gm17402F6Z0L5 76 aa5.53□□□□□ -1.52
Nipbl-201ENSMUST00000052965 Gm17416Q30KP4 66 aa5.47□□□□□ -1.53
Nipbl-201ENSMUST00000052965 Gm2696A0A1W2P709 240 aa5.47□□□□□ -1.53
Nipbl-201ENSMUST00000052965 Svep1A2AVA0 3567 aa5.47□□□□□ -1.53
Nipbl-201ENSMUST00000052965 LystP97412 3788 aa5.45□□□□□ -1.54
Nipbl-201ENSMUST00000052965 Col7a1Q63870 2944 aa5.41□□□□□ -1.54
Nipbl-201ENSMUST00000052965 Muc4Q8JZM8 3443 aa5.34□□□□□ -1.56
Nipbl-201ENSMUST00000052965 2210017I01RikA0A0A6YVV1 95 aa5.34□□□□□ -1.56
Nipbl-201ENSMUST00000052965 Xirp2Q4U4S6 3784 aa5.31□□□□□ -1.56
Nipbl-201ENSMUST00000052965 Muc6Q80T03 2850 aa5.25□□□□□ -1.57
Nipbl-201ENSMUST00000052965 BsnO88737 3942 aa5.24□□□□□ -1.57
Nipbl-201ENSMUST00000052965 4933428G20RikQ9D3X4 101 aa5.18□□□□□ -1.58
Nipbl-201ENSMUST00000052965 CubnQ9JLB4 3623 aa5.16□□□□□ -1.58
Nipbl-201ENSMUST00000052965 Krtap3-2Q9D638 99 aa5.1□□□□□ -1.59
Nipbl-201ENSMUST00000052965 Krtap3-3Q9D7P0 99 aa5.1□□□□□ -1.59
Nipbl-201ENSMUST00000052965 Hspg2Q05793 3707 aaKnown RBP5.09□□□□□ -1.6
Nipbl-201ENSMUST00000052965 Csmd3Q80T79 3707 aa5.08□□□□□ -1.6
Nipbl-201ENSMUST00000052965 Gm19668J3QMD1 248 aa5.07□□□□□ -1.6
Nipbl-201ENSMUST00000052965 Gm11939A2A592 99 aa5.06□□□□□ -1.6
Nipbl-201ENSMUST00000052965 Krtap13-1Q8K198 168 aa5.01□□□□□ -1.61
Nipbl-201ENSMUST00000052965 Gm9736A0A1W2P7N1 277 aa5□□□□□ -1.61
Nipbl-201ENSMUST00000052965 Krtap3-1A2A591 98 aa4.98□□□□□ -1.61
Nipbl-201ENSMUST00000052965 Krtap7-1Q9D3I6 87 aa4.95□□□□□ -1.62
Nipbl-201ENSMUST00000052965 Dnah3Q8BW94 4083 aa4.95□□□□□ -1.62
Nipbl-201ENSMUST00000052965 Dnah7bL7N1Y0 4068 aa4.89□□□□□ -1.63
Nipbl-201ENSMUST00000052965 Krtap19-5O08632 62 aa4.86□□□□□ -1.63
Nipbl-201ENSMUST00000052965 Gm9918Q8BUR5 174 aa4.84□□□□□ -1.63
Nipbl-201ENSMUST00000052965 Kmt2aP55200 3966 aa4.8□□□□□ -1.64
Nipbl-201ENSMUST00000052965 Huwe1Q7TMY8 4377 aaKnown RBP4.79□□□□□ -1.64
Nipbl-201ENSMUST00000052965 PrkdcP97313 4128 aa4.74□□□□□ -1.65
Nipbl-201ENSMUST00000052965 TnxbO35452 4006 aa4.72□□□□□ -1.65
Nipbl-201ENSMUST00000052965 Vps13bQ80TY5 3993 aa4.7□□□□□ -1.66
Nipbl-201ENSMUST00000052965 Sprr2a3Q4KL71 83 aa4.69□□□□□ -1.66
Nipbl-201ENSMUST00000052965 Sprr2a1Q9CQK8 83 aa4.69□□□□□ -1.66
Nipbl-201ENSMUST00000052965 Gm10318A0A1W2P728 225 aa4.61□□□□□ -1.67
Nipbl-201ENSMUST00000052965 Dnah14A0A140LIJ4 4489 aa4.59□□□□□ -1.67
Nipbl-201ENSMUST00000052965 Dnah6E9Q0B6 4144 aa4.58□□□□□ -1.68
Nipbl-201ENSMUST00000052965 Crct1Q6PAI5 102 aa4.58□□□□□ -1.68
Nipbl-201ENSMUST00000052965 Krtap1-5A2A590 122 aa4.58□□□□□ -1.68
Nipbl-201ENSMUST00000052965 Dnah7cA0A087WR13 4024 aa4.57□□□□□ -1.68
Nipbl-201ENSMUST00000052965 Dnah7aE9Q0T8 4024 aa4.52□□□□□ -1.69
Nipbl-201ENSMUST00000052965 Dnah10D3YYQ8 4591 aa4.5□□□□□ -1.69
Nipbl-201ENSMUST00000052965 Dnah1E9Q8T7 4250 aa4.48□□□□□ -1.69
Nipbl-201ENSMUST00000052965 Vps13dB1ART2 4390 aa4.47□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 88.4 ms