RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Mast4Q811L6 2618 aa7.92□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Igsf10Q3V1M1 2594 aa7.92□□□□□ -1.14
Col4a1-201ENSMUST00000033898 D6Ertd527eA0A0N4SWI3 464 aa7.91□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Rps29P62274 56 aa7.91□□□□□ -1.14
Col4a1-201ENSMUST00000033898 9530053A07RikE9PVG8 2581 aa7.9□□□□□ -1.14
Col4a1-201ENSMUST00000033898 Ubr5Q80TP3 2792 aa7.88□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Nbeal2Q6ZQA0 2742 aa7.87□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Tep1P97499 2629 aa7.87□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Dmxl2Q8BPN8 3032 aa7.86□□□□□ -1.15
Col4a1-201ENSMUST00000033898 Lama5Q61001 3718 aa7.82□□□□□ -1.16
Col4a1-201ENSMUST00000033898 Tnp1P10856 55 aa7.82□□□□□ -1.16
Col4a1-201ENSMUST00000033898 Chd6A3KFM7 2711 aa7.8□□□□□ -1.16
Col4a1-201ENSMUST00000033898 Gm9112A2AI92 75 aa7.75□□□□□ -1.17
Col4a1-201ENSMUST00000033898 NbeaQ9EPN1 2936 aa7.71□□□□□ -1.17
Col4a1-201ENSMUST00000033898 Itpr1P11881 2749 aa7.71□□□□□ -1.17
Col4a1-201ENSMUST00000033898 Utp20Q5XG71 2788 aaKnown RBP7.69□□□□□ -1.18
Col4a1-201ENSMUST00000033898 Cmya5Q70KF4 3739 aa7.69□□□□□ -1.18
Col4a1-201ENSMUST00000033898 SmcpP15265 143 aa7.68□□□□□ -1.18
Col4a1-201ENSMUST00000033898 Stab2Q8R4U0 2559 aa7.65□□□□□ -1.19
Col4a1-201ENSMUST00000033898 Pkd1l1Q8R526 2615 aa7.61□□□□□ -1.19
Col4a1-201ENSMUST00000033898 Muc5acE9QAQ8 3455 aa7.6□□□□□ -1.19
Col4a1-201ENSMUST00000033898 Gm9918Q8BUR5 174 aa7.58□□□□□ -1.2
Col4a1-201ENSMUST00000033898 Svep1A2AVA0 3567 aa7.55□□□□□ -1.2
Col4a1-201ENSMUST00000033898 Gm20537G3UYK7 97 aa7.54□□□□□ -1.2
Col4a1-201ENSMUST00000033898 A930033H14RikG5E8X6 103 aa7.51□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Csmd2V9GX34 3611 aa7.49□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Trank1Q8BV79 2999 aa7.48□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Gm40193A0A1B0GT39 78 aa7.48□□□□□ -1.21
Col4a1-201ENSMUST00000033898 Itpr2Q9Z329 2701 aa7.47□□□□□ -1.21
Col4a1-201ENSMUST00000033898 ApcQ61315 2845 aa7.46□□□□□ -1.22
Col4a1-201ENSMUST00000033898 B930094E09RikQ8C4T2 136 aa7.45□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Muc2Q80Z19 2680 aa7.45□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Igfn1Q3KNY0 2849 aa7.45□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Gm9736A0A1W2P7N1 277 aa7.44□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Zzef1Q5SSH7 2924 aa7.44□□□□□ -1.22
Col4a1-201ENSMUST00000033898 FcgbpE9Q0B5 2583 aa7.43□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Srrm2Q8BTI8 2703 aaKnown RBP7.43□□□□□ -1.22
Col4a1-201ENSMUST00000033898 DspE9Q557 2883 aaKnown RBP7.42□□□□□ -1.22
Col4a1-201ENSMUST00000033898 Col6a5A6H584 2640 aa7.42□□□□□ -1.22
Col4a1-201ENSMUST00000033898 TgO08710 2766 aa7.37□□□□□ -1.23
Col4a1-201ENSMUST00000033898 Prm2P07978 107 aa7.36□□□□□ -1.23
Col4a1-201ENSMUST00000033898 Gm10318A0A1W2P728 225 aa7.35□□□□□ -1.23
Col4a1-201ENSMUST00000033898 Hivep1Q03172 2688 aa7.33□□□□□ -1.24
Col4a1-201ENSMUST00000033898 Tex15F8VPN2 2785 aa7.32□□□□□ -1.24
Col4a1-201ENSMUST00000033898 Tenm4Q3UHK6 2771 aa7.24□□□□□ -1.25
Col4a1-201ENSMUST00000033898 LrbaQ9ESE1 2856 aa7.19□□□□□ -1.26
Col4a1-201ENSMUST00000033898 Muc4Q8JZM8 3443 aa7.18□□□□□ -1.26
Col4a1-201ENSMUST00000033898 Celsr2Q9R0M0 2920 aa7.16□□□□□ -1.26
Col4a1-201ENSMUST00000033898 2310079G19RikQ9D6L6 185 aa7.14□□□□□ -1.27
Col4a1-201ENSMUST00000033898 OtogO55225 2910 aa7.09□□□□□ -1.27
Col4a1-201ENSMUST00000033898 Chd9Q8BYH8 2885 aa7.09□□□□□ -1.28
Col4a1-201ENSMUST00000033898 Ank2Q8C8R3 3898 aa7.08□□□□□ -1.28
Col4a1-201ENSMUST00000033898 Crct1Q6PAI5 102 aa7.07□□□□□ -1.28
Col4a1-201ENSMUST00000033898 4933428G20RikQ9D3X4 101 aa7.02□□□□□ -1.29
Col4a1-201ENSMUST00000033898 Pdzd2E9Q1M1 2796 aa7□□□□□ -1.29
Col4a1-201ENSMUST00000033898 Gm17416Q30KP4 66 aa7□□□□□ -1.29
Col4a1-201ENSMUST00000033898 LystP97412 3788 aa6.99□□□□□ -1.29
Col4a1-201ENSMUST00000033898 BsnO88737 3942 aa6.98□□□□□ -1.29
Col4a1-201ENSMUST00000033898 Tenm3Q9WTS6 2715 aa6.95□□□□□ -1.3
Col4a1-201ENSMUST00000033898 2210017I01RikA0A0A6YVV1 95 aa6.95□□□□□ -1.3
Col4a1-201ENSMUST00000033898 FlncQ8VHX6 2726 aaKnown RBP6.95□□□□□ -1.3
Col4a1-201ENSMUST00000033898 CubnQ9JLB4 3623 aa6.93□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Gm19668J3QMD1 248 aa6.92□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Tenm1Q9WTS4 2731 aa6.9□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Nf1Q04690 2841 aa6.9□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Tenm2Q9WTS5 2764 aa6.9□□□□□ -1.3
Col4a1-201ENSMUST00000033898 Gm17402F6Z0L5 76 aa6.82□□□□□ -1.32
Col4a1-201ENSMUST00000033898 Hspg2Q05793 3707 aaKnown RBP6.79□□□□□ -1.32
Col4a1-201ENSMUST00000033898 Krtap13-1Q8K198 168 aa6.74□□□□□ -1.33
Col4a1-201ENSMUST00000033898 Huwe1Q7TMY8 4377 aaKnown RBP6.71□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Xirp2Q4U4S6 3784 aa6.7□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Gm6358A0A087WPH4 74 aa6.69□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Krtap19-5O08632 62 aa6.69□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Fbn1Q61554 2873 aaKnown RBP6.68□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Helz2E9QAM5 2947 aaKnown RBP6.65□□□□□ -1.34
Col4a1-201ENSMUST00000033898 Megf8P60882 2789 aa6.63□□□□□ -1.35
Col4a1-201ENSMUST00000033898 Gm11939A2A592 99 aa6.61□□□□□ -1.35
Col4a1-201ENSMUST00000033898 Csmd3Q80T79 3707 aa6.59□□□□□ -1.35
Col4a1-201ENSMUST00000033898 Dnah14A0A140LIJ4 4489 aa6.54□□□□□ -1.36
Col4a1-201ENSMUST00000033898 Col7a1Q63870 2944 aa6.53□□□□□ -1.36
Col4a1-201ENSMUST00000033898 VwfQ8CIZ8 2813 aa6.51□□□□□ -1.37
Col4a1-201ENSMUST00000033898 Krtap3-1A2A591 98 aa6.45□□□□□ -1.38
Col4a1-201ENSMUST00000033898 Sprr2kO70562 68 aa6.33□□□□□ -1.4
Col4a1-201ENSMUST00000033898 Krtap8-1O08633 61 aa6.25□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Krtap3-2Q9D638 99 aa6.25□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Krtap3-3Q9D7P0 99 aa6.25□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Krtap7-1Q9D3I6 87 aa6.24□□□□□ -1.41
Col4a1-201ENSMUST00000033898 Gm18596A0A1W2P860 280 aa6.2□□□□□ -1.42
Col4a1-201ENSMUST00000033898 Dnah6E9Q0B6 4144 aa6.18□□□□□ -1.42
Col4a1-201ENSMUST00000033898 Dnah10D3YYQ8 4591 aa6.16□□□□□ -1.42
Col4a1-201ENSMUST00000033898 Dnah7bL7N1Y0 4068 aa6.14□□□□□ -1.43
Col4a1-201ENSMUST00000033898 LorP18165 486 aa6.13□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Kmt2aP55200 3966 aa6.13□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Muc6Q80T03 2850 aa6.12□□□□□ -1.43
Col4a1-201ENSMUST00000033898 PrkdcP97313 4128 aa6.12□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Krtap19-9aF8WH65 55 aa6.1□□□□□ -1.43
Col4a1-201ENSMUST00000033898 Dnah11E9Q7N9 4488 aa6.05□□□□□ -1.44
Col4a1-201ENSMUST00000033898 Gm19402J3QJV4 266 aa5.99□□□□□ -1.45
Col4a1-201ENSMUST00000033898 Krtap1-5A2A590 122 aa5.99□□□□□ -1.45
Col4a1-201ENSMUST00000033898 Sprr2a3Q4KL71 83 aa5.96□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms