RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Unc80Q8BLN6 3261 aa5.36□□□□□ -1.55
Ubr1-201ENSMUST00000028728 AtmQ62388 3066 aa5.35□□□□□ -1.55
Ubr1-201ENSMUST00000028728 B930094E09RikQ8C4T2 136 aa5.34□□□□□ -1.55
Ubr1-201ENSMUST00000028728 Adgrg4B7ZCC9 3073 aa5.33□□□□□ -1.56
Ubr1-201ENSMUST00000028728 Gm5965D3Z724 196 aa5.33□□□□□ -1.56
Ubr1-201ENSMUST00000028728 Usp34Q6ZQ93 3582 aa5.32□□□□□ -1.56
Ubr1-201ENSMUST00000028728 Celsr2Q9R0M0 2920 aa5.32□□□□□ -1.56
Ubr1-201ENSMUST00000028728 Krtap10-4Q08EG8 221 aa5.32□□□□□ -1.56
Ubr1-201ENSMUST00000028728 Pdzd2E9Q1M1 2796 aa5.29□□□□□ -1.56
Ubr1-201ENSMUST00000028728 NbeaQ9EPN1 2936 aa5.29□□□□□ -1.56
Ubr1-201ENSMUST00000028728 Wdfy4E9Q2M9 3149 aa5.28□□□□□ -1.56
Ubr1-201ENSMUST00000028728 Cdh23Q99PF4 3354 aa5.27□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Prm2P07978 107 aa5.26□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Gm17416Q30KP4 66 aa5.25□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Chd9Q8BYH8 2885 aa5.25□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Lrrc37aB1AWG4 3215 aa5.24□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Tenm3Q9WTS6 2715 aa5.23□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Krtap10-10A0A1W2P7T6 217 aa5.23□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Gm17402F6Z0L5 76 aa5.23□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Dmxl2Q8BPN8 3032 aa5.22□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Celsr3Q91ZI0 3301 aa5.22□□□□□ -1.57
Ubr1-201ENSMUST00000028728 Nf1Q04690 2841 aa5.2□□□□□ -1.58
Ubr1-201ENSMUST00000028728 2310057N15RikQ9D6T8 200 aa5.18□□□□□ -1.58
Ubr1-201ENSMUST00000028728 Lama1P19137 3084 aa5.15□□□□□ -1.58
Ubr1-201ENSMUST00000028728 Helz2E9QAM5 2947 aaKnown RBP5.14□□□□□ -1.59
Ubr1-201ENSMUST00000028728 Szt2A2A9C3 3431 aa5.14□□□□□ -1.59
Ubr1-201ENSMUST00000028728 Trank1Q8BV79 2999 aa5.14□□□□□ -1.59
Ubr1-201ENSMUST00000028728 2210017I01RikA0A0A6YVV1 95 aa5.13□□□□□ -1.59
Ubr1-201ENSMUST00000028728 Gm2696A0A1W2P709 240 aa5.11□□□□□ -1.59
Ubr1-201ENSMUST00000028728 LrbaQ9ESE1 2856 aa5.11□□□□□ -1.59
Ubr1-201ENSMUST00000028728 Tenm4Q3UHK6 2771 aa5.06□□□□□ -1.6
Ubr1-201ENSMUST00000028728 Tenm1Q9WTS4 2731 aa5.02□□□□□ -1.61
Ubr1-201ENSMUST00000028728 Brca2P97929 3329 aa5□□□□□ -1.61
Ubr1-201ENSMUST00000028728 Krtap3-2Q9D638 99 aa4.95□□□□□ -1.62
Ubr1-201ENSMUST00000028728 Krtap3-3Q9D7P0 99 aa4.95□□□□□ -1.62
Ubr1-201ENSMUST00000028728 Dchs2A0A0A6YW72 3346 aa4.95□□□□□ -1.62
Ubr1-201ENSMUST00000028728 Gm11939A2A592 99 aa4.95□□□□□ -1.62
Ubr1-201ENSMUST00000028728 SpegQ62407 3262 aa4.86□□□□□ -1.63
Ubr1-201ENSMUST00000028728 Megf8P60882 2789 aa4.85□□□□□ -1.63
Ubr1-201ENSMUST00000028728 Zfhx3Q61329 3726 aa4.84□□□□□ -1.63
Ubr1-201ENSMUST00000028728 Col6a3E9PWQ3 3284 aa4.83□□□□□ -1.64
Ubr1-201ENSMUST00000028728 Tenm2Q9WTS5 2764 aa4.81□□□□□ -1.64
Ubr1-201ENSMUST00000028728 Krtap3-1A2A591 98 aa4.8□□□□□ -1.64
Ubr1-201ENSMUST00000028728 4933428G20RikQ9D3X4 101 aa4.8□□□□□ -1.64
Ubr1-201ENSMUST00000028728 Gm19668J3QMD1 248 aa4.79□□□□□ -1.64
Ubr1-201ENSMUST00000028728 OtogO55225 2910 aa4.77□□□□□ -1.65
Ubr1-201ENSMUST00000028728 RelnQ60841 3461 aa4.77□□□□□ -1.65
Ubr1-201ENSMUST00000028728 VcanQ62059 3357 aa4.76□□□□□ -1.65
Ubr1-201ENSMUST00000028728 Dchs1E9PVD3 3291 aa4.74□□□□□ -1.65
Ubr1-201ENSMUST00000028728 Krtap13-1Q8K198 168 aa4.72□□□□□ -1.65
Ubr1-201ENSMUST00000028728 Gm9736A0A1W2P7N1 277 aa4.72□□□□□ -1.65
Ubr1-201ENSMUST00000028728 VwfQ8CIZ8 2813 aa4.7□□□□□ -1.66
Ubr1-201ENSMUST00000028728 Myo15aQ9QZZ4 3511 aa4.68□□□□□ -1.66
Ubr1-201ENSMUST00000028728 Akap9Q70FJ1 3797 aa4.68□□□□□ -1.66
Ubr1-201ENSMUST00000028728 Vps13cQ8BX70 3748 aa4.66□□□□□ -1.66
Ubr1-201ENSMUST00000028728 Muc5acE9QAQ8 3455 aa4.64□□□□□ -1.67
Ubr1-201ENSMUST00000028728 Krtap7-1Q9D3I6 87 aa4.61□□□□□ -1.67
Ubr1-201ENSMUST00000028728 DmdP11531 3678 aa4.61□□□□□ -1.67
Ubr1-201ENSMUST00000028728 Wdfy3Q6VNB8 3508 aa4.59□□□□□ -1.67
Ubr1-201ENSMUST00000028728 Csmd1Q923L3 3564 aa4.58□□□□□ -1.68
Ubr1-201ENSMUST00000028728 Krtap19-5O08632 62 aa4.58□□□□□ -1.68
Ubr1-201ENSMUST00000028728 Fbn1Q61554 2873 aaKnown RBP4.57□□□□□ -1.68
Ubr1-201ENSMUST00000028728 Gm9918Q8BUR5 174 aa4.56□□□□□ -1.68
Ubr1-201ENSMUST00000028728 Sprr2a3Q4KL71 83 aa4.51□□□□□ -1.69
Ubr1-201ENSMUST00000028728 Sprr2a1Q9CQK8 83 aa4.51□□□□□ -1.69
Ubr1-201ENSMUST00000028728 Col7a1Q63870 2944 aa4.44□□□□□ -1.7
Ubr1-201ENSMUST00000028728 Smg1Q8BKX6 3658 aaKnown RBP4.44□□□□□ -1.7
Ubr1-201ENSMUST00000028728 Krtap1-5A2A590 122 aa4.42□□□□□ -1.7
Ubr1-201ENSMUST00000028728 SpenQ62504 3644 aaKnown RBP4.42□□□□□ -1.7
Ubr1-201ENSMUST00000028728 Zfhx4Q9JJN2 3550 aa4.37□□□□□ -1.71
Ubr1-201ENSMUST00000028728 Ank2Q8C8R3 3898 aa4.36□□□□□ -1.71
Ubr1-201ENSMUST00000028728 Muc6Q80T03 2850 aa4.35□□□□□ -1.71
Ubr1-201ENSMUST00000028728 Lama5Q61001 3718 aa4.33□□□□□ -1.72
Ubr1-201ENSMUST00000028728 Gm10318A0A1W2P728 225 aa4.32□□□□□ -1.72
Ubr1-201ENSMUST00000028728 Crct1Q6PAI5 102 aa4.26□□□□□ -1.73
Ubr1-201ENSMUST00000028728 Krtap19-9aF8WH65 55 aa4.23□□□□□ -1.73
Ubr1-201ENSMUST00000028728 Krtap1-4Q3V2D6 188 aa4.21□□□□□ -1.74
Ubr1-201ENSMUST00000028728 Cmya5Q70KF4 3739 aa4.21□□□□□ -1.74
Ubr1-201ENSMUST00000028728 Krtap19-9bQ99NG9 58 aa4.2□□□□□ -1.74
Ubr1-201ENSMUST00000028728 Gm884A2A9H6 3643 aa4.19□□□□□ -1.74
Ubr1-201ENSMUST00000028728 Gm19402J3QJV4 266 aa4.18□□□□□ -1.74
Ubr1-201ENSMUST00000028728 Dnah5Q8VHE6 4621 aa4.17□□□□□ -1.74
Ubr1-201ENSMUST00000028728 Dnah14A0A140LIJ4 4489 aa4.16□□□□□ -1.74
Ubr1-201ENSMUST00000028728 Stard9Q80TF6 4561 aa4.14□□□□□ -1.75
Ubr1-201ENSMUST00000028728 Dnah10D3YYQ8 4591 aa4.14□□□□□ -1.75
Ubr1-201ENSMUST00000028728 Vps13dB1ART2 4390 aa4.12□□□□□ -1.75
Ubr1-201ENSMUST00000028728 Dnah17Q69Z23 4481 aa4.1□□□□□ -1.75
Ubr1-201ENSMUST00000028728 Muc4Q8JZM8 3443 aa4.09□□□□□ -1.75
Ubr1-201ENSMUST00000028728 Huwe1Q7TMY8 4377 aaKnown RBP4.09□□□□□ -1.76
Ubr1-201ENSMUST00000028728 Svep1A2AVA0 3567 aa4.08□□□□□ -1.76
Ubr1-201ENSMUST00000028728 Krtap12-1Q9Z287 130 aa4.04□□□□□ -1.76
Ubr1-201ENSMUST00000028728 PlecQ9QXS1 4691 aaKnown RBP4.03□□□□□ -1.76
Ubr1-201ENSMUST00000028728 Gm6358A0A087WPH4 74 aa4□□□□□ -1.77
Ubr1-201ENSMUST00000028728 LystP97412 3788 aa3.99□□□□□ -1.77
Ubr1-201ENSMUST00000028728 2310046K23RikA0A0A6YVW6 87 aa3.98□□□□□ -1.77
Ubr1-201ENSMUST00000028728 Krtap8-1O08633 61 aa3.94□□□□□ -1.78
Ubr1-201ENSMUST00000028728 Csmd2V9GX34 3611 aa3.91□□□□□ -1.78
Ubr1-201ENSMUST00000028728 Dnah2P0C6F1 4456 aa3.91□□□□□ -1.78
Ubr1-201ENSMUST00000028728 ApobE9Q414 4505 aa3.87□□□□□ -1.79
Ubr1-201ENSMUST00000028728 Dnah11E9Q7N9 4488 aa3.87□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms