RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Igfn1Q3KNY0 2849 aa7.66□□□□□ -1.18
Col5a1-201ENSMUST00000028280 Adgrg4B7ZCC9 3073 aa7.66□□□□□ -1.18
Col5a1-201ENSMUST00000028280 2310061N02RikQ9D6S9 174 aa7.64□□□□□ -1.19
Col5a1-201ENSMUST00000028280 Dmxl2Q8BPN8 3032 aa7.62□□□□□ -1.19
Col5a1-201ENSMUST00000028280 NbeaQ9EPN1 2936 aa7.61□□□□□ -1.19
Col5a1-201ENSMUST00000028280 Brca2P97929 3329 aa7.59□□□□□ -1.19
Col5a1-201ENSMUST00000028280 Chd9Q8BYH8 2885 aa7.59□□□□□ -1.19
Col5a1-201ENSMUST00000028280 Prm2P07978 107 aa7.57□□□□□ -1.2
Col5a1-201ENSMUST00000028280 FlncQ8VHX6 2726 aaKnown RBP7.57□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Gm20537G3UYK7 97 aa7.57□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Szt2A2A9C3 3431 aa7.57□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Gm9507D3Z5T3 223 aa7.56□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Gm5965D3Z724 196 aa7.56□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Hivep1Q03172 2688 aa7.55□□□□□ -1.2
Col5a1-201ENSMUST00000028280 LrbaQ9ESE1 2856 aa7.55□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Trank1Q8BV79 2999 aa7.55□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Lrrc37aB1AWG4 3215 aa7.55□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Tenm1Q9WTS4 2731 aa7.53□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Vps13cQ8BX70 3748 aa7.53□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Pdzd2E9Q1M1 2796 aa7.53□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Akap9Q70FJ1 3797 aa7.53□□□□□ -1.2
Col5a1-201ENSMUST00000028280 Nf1Q04690 2841 aa7.47□□□□□ -1.21
Col5a1-201ENSMUST00000028280 Krtap10-4Q08EG8 221 aa7.46□□□□□ -1.21
Col5a1-201ENSMUST00000028280 2310057N15RikQ9D6T8 200 aa7.46□□□□□ -1.22
Col5a1-201ENSMUST00000028280 B930094E09RikQ8C4T2 136 aa7.46□□□□□ -1.22
Col5a1-201ENSMUST00000028280 Celsr2Q9R0M0 2920 aa7.45□□□□□ -1.22
Col5a1-201ENSMUST00000028280 Dchs2A0A0A6YW72 3346 aa7.43□□□□□ -1.22
Col5a1-201ENSMUST00000028280 Col6a3E9PWQ3 3284 aa7.39□□□□□ -1.23
Col5a1-201ENSMUST00000028280 SpegQ62407 3262 aa7.39□□□□□ -1.23
Col5a1-201ENSMUST00000028280 Krtap10-10A0A1W2P7T6 217 aa7.37□□□□□ -1.23
Col5a1-201ENSMUST00000028280 Myo15aQ9QZZ4 3511 aa7.34□□□□□ -1.23
Col5a1-201ENSMUST00000028280 Dchs1E9PVD3 3291 aa7.3□□□□□ -1.24
Col5a1-201ENSMUST00000028280 VcanQ62059 3357 aa7.27□□□□□ -1.25
Col5a1-201ENSMUST00000028280 Tenm3Q9WTS6 2715 aa7.22□□□□□ -1.25
Col5a1-201ENSMUST00000028280 Megf8P60882 2789 aa7.18□□□□□ -1.26
Col5a1-201ENSMUST00000028280 Gm2696A0A1W2P709 240 aa7.16□□□□□ -1.26
Col5a1-201ENSMUST00000028280 A930033H14RikG5E8X6 103 aa7.15□□□□□ -1.26
Col5a1-201ENSMUST00000028280 Tenm4Q3UHK6 2771 aa7.15□□□□□ -1.27
Col5a1-201ENSMUST00000028280 DmdP11531 3678 aa7.14□□□□□ -1.27
Col5a1-201ENSMUST00000028280 Csmd1Q923L3 3564 aa7.12□□□□□ -1.27
Col5a1-201ENSMUST00000028280 2310079G19RikQ9D6L6 185 aa7.11□□□□□ -1.27
Col5a1-201ENSMUST00000028280 4933428G20RikQ9D3X4 101 aa7.07□□□□□ -1.28
Col5a1-201ENSMUST00000028280 Cmya5Q70KF4 3739 aa7.07□□□□□ -1.28
Col5a1-201ENSMUST00000028280 SpenQ62504 3644 aaKnown RBP7.06□□□□□ -1.28
Col5a1-201ENSMUST00000028280 Gm17402F6Z0L5 76 aa7.06□□□□□ -1.28
Col5a1-201ENSMUST00000028280 Wdfy3Q6VNB8 3508 aa7.05□□□□□ -1.28
Col5a1-201ENSMUST00000028280 Smg1Q8BKX6 3658 aaKnown RBP7.04□□□□□ -1.28
Col5a1-201ENSMUST00000028280 Gm17416Q30KP4 66 aa7.03□□□□□ -1.28
Col5a1-201ENSMUST00000028280 OtogO55225 2910 aa7□□□□□ -1.29
Col5a1-201ENSMUST00000028280 Ank2Q8C8R3 3898 aa6.99□□□□□ -1.29
Col5a1-201ENSMUST00000028280 Helz2E9QAM5 2947 aaKnown RBP6.95□□□□□ -1.3
Col5a1-201ENSMUST00000028280 RelnQ60841 3461 aa6.95□□□□□ -1.3
Col5a1-201ENSMUST00000028280 Gm9918Q8BUR5 174 aa6.92□□□□□ -1.3
Col5a1-201ENSMUST00000028280 VwfQ8CIZ8 2813 aa6.88□□□□□ -1.31
Col5a1-201ENSMUST00000028280 2210017I01RikA0A0A6YVV1 95 aa6.88□□□□□ -1.31
Col5a1-201ENSMUST00000028280 Zfhx4Q9JJN2 3550 aa6.87□□□□□ -1.31
Col5a1-201ENSMUST00000028280 Lama5Q61001 3718 aa6.86□□□□□ -1.31
Col5a1-201ENSMUST00000028280 Muc5acE9QAQ8 3455 aa6.85□□□□□ -1.31
Col5a1-201ENSMUST00000028280 Tenm2Q9WTS5 2764 aa6.8□□□□□ -1.32
Col5a1-201ENSMUST00000028280 Gm884A2A9H6 3643 aa6.79□□□□□ -1.32
Col5a1-201ENSMUST00000028280 Gm19668J3QMD1 248 aa6.79□□□□□ -1.32
Col5a1-201ENSMUST00000028280 Fbn1Q61554 2873 aaKnown RBP6.72□□□□□ -1.33
Col5a1-201ENSMUST00000028280 Csmd2V9GX34 3611 aa6.64□□□□□ -1.35
Col5a1-201ENSMUST00000028280 Gm9736A0A1W2P7N1 277 aa6.57□□□□□ -1.36
Col5a1-201ENSMUST00000028280 Col7a1Q63870 2944 aa6.45□□□□□ -1.38
Col5a1-201ENSMUST00000028280 Gm11939A2A592 99 aa6.39□□□□□ -1.39
Col5a1-201ENSMUST00000028280 Krtap13-1Q8K198 168 aa6.39□□□□□ -1.39
Col5a1-201ENSMUST00000028280 Gm10318A0A1W2P728 225 aa6.37□□□□□ -1.39
Col5a1-201ENSMUST00000028280 Svep1A2AVA0 3567 aa6.31□□□□□ -1.4
Col5a1-201ENSMUST00000028280 Xirp2Q4U4S6 3784 aa6.3□□□□□ -1.4
Col5a1-201ENSMUST00000028280 LystP97412 3788 aa6.28□□□□□ -1.4
Col5a1-201ENSMUST00000028280 Krtap3-1A2A591 98 aa6.27□□□□□ -1.41
Col5a1-201ENSMUST00000028280 Gm6358A0A087WPH4 74 aa6.27□□□□□ -1.41
Col5a1-201ENSMUST00000028280 BsnO88737 3942 aa6.26□□□□□ -1.41
Col5a1-201ENSMUST00000028280 Krtap19-5O08632 62 aa6.21□□□□□ -1.42
Col5a1-201ENSMUST00000028280 Crct1Q6PAI5 102 aa6.2□□□□□ -1.42
Col5a1-201ENSMUST00000028280 Muc6Q80T03 2850 aa6.2□□□□□ -1.42
Col5a1-201ENSMUST00000028280 Krtap3-2Q9D638 99 aa6.19□□□□□ -1.42
Col5a1-201ENSMUST00000028280 Krtap3-3Q9D7P0 99 aa6.19□□□□□ -1.42
Col5a1-201ENSMUST00000028280 Csmd3Q80T79 3707 aa6.18□□□□□ -1.42
Col5a1-201ENSMUST00000028280 Hspg2Q05793 3707 aaKnown RBP6.15□□□□□ -1.42
Col5a1-201ENSMUST00000028280 Muc4Q8JZM8 3443 aa6.08□□□□□ -1.44
Col5a1-201ENSMUST00000028280 CubnQ9JLB4 3623 aa6.06□□□□□ -1.44
Col5a1-201ENSMUST00000028280 Gm18596A0A1W2P860 280 aa6.05□□□□□ -1.44
Col5a1-201ENSMUST00000028280 Krtap7-1Q9D3I6 87 aa6□□□□□ -1.45
Col5a1-201ENSMUST00000028280 Sprr2a3Q4KL71 83 aa5.91□□□□□ -1.46
Col5a1-201ENSMUST00000028280 Sprr2a1Q9CQK8 83 aa5.91□□□□□ -1.46
Col5a1-201ENSMUST00000028280 Krtap19-9aF8WH65 55 aa5.9□□□□□ -1.46
Col5a1-201ENSMUST00000028280 Huwe1Q7TMY8 4377 aaKnown RBP5.9□□□□□ -1.47
Col5a1-201ENSMUST00000028280 Gm19402J3QJV4 266 aa5.89□□□□□ -1.47
Col5a1-201ENSMUST00000028280 Krtap1-5A2A590 122 aa5.88□□□□□ -1.47
Col5a1-201ENSMUST00000028280 Dnah7bL7N1Y0 4068 aa5.87□□□□□ -1.47
Col5a1-201ENSMUST00000028280 Krtap8-1O08633 61 aa5.87□□□□□ -1.47
Col5a1-201ENSMUST00000028280 Sprr2kO70562 68 aa5.86□□□□□ -1.47
Col5a1-201ENSMUST00000028280 Dnah3Q8BW94 4083 aa5.85□□□□□ -1.47
Col5a1-201ENSMUST00000028280 Krtap19-9bQ99NG9 58 aa5.78□□□□□ -1.48
Col5a1-201ENSMUST00000028280 Krtap12-1Q9Z287 130 aa5.72□□□□□ -1.49
Col5a1-201ENSMUST00000028280 Dnah7cA0A087WR13 4024 aa5.69□□□□□ -1.5
Col5a1-201ENSMUST00000028280 Vps13bQ80TY5 3993 aa5.69□□□□□ -1.5
Col5a1-201ENSMUST00000028280 PrkdcP97313 4128 aa5.66□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms