RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 Elof1P60003 83 aa9.96□□□□□ -0.82
Ltb-201ENSMUST00000025262 Rpl39lQ9CQD0 51 aa9.96□□□□□ -0.82
Ltb-201ENSMUST00000025262 4930535I16RikQ9CUI2 172 aa9.96□□□□□ -0.82
Ltb-201ENSMUST00000025262 4930524J08RikQ9CUJ5 163 aa9.96□□□□□ -0.82
Ltb-201ENSMUST00000025262 Xlr5cQ9JJR2 179 aa9.96□□□□□ -0.82
Ltb-201ENSMUST00000025262 Igkv1-35A0A0G2JDE5 120 aa9.95□□□□□ -0.82
Ltb-201ENSMUST00000025262 Tmem243B2RVB9 118 aa9.95□□□□□ -0.82
Ltb-201ENSMUST00000025262 Acyp1P56376 99 aa9.95□□□□□ -0.82
Ltb-201ENSMUST00000025262 A0A286YE02 88 aa9.94□□□□□ -0.82
Ltb-201ENSMUST00000025262 Fam229aB2KGE5 128 aa9.94□□□□□ -0.82
Ltb-201ENSMUST00000025262 B930094E09RikQ8C4T2 136 aa9.94□□□□□ -0.82
Ltb-201ENSMUST00000025262 Gm11564A2A4L9 201 aa9.93□□□□□ -0.82
Ltb-201ENSMUST00000025262 Gm11563B1AQ90 168 aa9.93□□□□□ -0.82
Ltb-201ENSMUST00000025262 Gm11595B1AQA7 289 aa9.93□□□□□ -0.82
Ltb-201ENSMUST00000025262 Krtap4-8B1AQA8 209 aa9.93□□□□□ -0.82
Ltb-201ENSMUST00000025262 A730071L15RikQ8C4X0 137 aa9.93□□□□□ -0.82
Ltb-201ENSMUST00000025262 1700020N15RikL7MTX3 112 aa9.92□□□□□ -0.82
Ltb-201ENSMUST00000025262 Igkv4-58A0A0G2JGI6 119 aa9.91□□□□□ -0.82
Ltb-201ENSMUST00000025262 Pxt1Q8K459 51 aa9.91□□□□□ -0.82
Ltb-201ENSMUST00000025262 Gm16253D3Z167 63 aa9.89□□□□□ -0.83
Ltb-201ENSMUST00000025262 Gm26620Q9CY65 116 aa9.89□□□□□ -0.83
Ltb-201ENSMUST00000025262 Sigmar1O55242 223 aa9.88□□□□□ -0.83
Ltb-201ENSMUST00000025262 Gm10308Q9CVR5 141 aa9.87□□□□□ -0.83
Ltb-201ENSMUST00000025262 Vps25Q9CQ80 176 aa9.85□□□□□ -0.83
Ltb-201ENSMUST00000025262 Q8BT88 171 aa9.84□□□□□ -0.83
Ltb-201ENSMUST00000025262 Igkv2-109A0A075B5K6 120 aa9.82□□□□□ -0.84
Ltb-201ENSMUST00000025262 Gtf2h5Q8K2X8 71 aa9.79□□□□□ -0.84
Ltb-201ENSMUST00000025262 Ifitm6A0A1B0GS75 124 aa9.74□□□□□ -0.85
Ltb-201ENSMUST00000025262 Ighv10-3A0A075B5T6 119 aa9.73□□□□□ -0.85
Ltb-201ENSMUST00000025262 Gm45213A0A0U1RNZ6 101 aa9.73□□□□□ -0.85
Ltb-201ENSMUST00000025262 9530003J23RikQ8BM26 151 aa9.73□□□□□ -0.85
Ltb-201ENSMUST00000025262 Gm10401E9Q3K6 71 aa9.72□□□□□ -0.85
Ltb-201ENSMUST00000025262 Fam240bJ3QMB3 78 aa9.7□□□□□ -0.86
Ltb-201ENSMUST00000025262 Xcl1P47993 114 aa9.7□□□□□ -0.86
Ltb-201ENSMUST00000025262 1700018G05RikA0A1B0GSI2 66 aa9.69□□□□□ -0.86
Ltb-201ENSMUST00000025262 Gm37389A0A0A6YW05 95 aa9.68□□□□□ -0.86
Ltb-201ENSMUST00000025262 Igkv8-30A0A140T8M3 121 aa9.67□□□□□ -0.86
Ltb-201ENSMUST00000025262 Sfta2E9PXB6 77 aa9.66□□□□□ -0.86
Ltb-201ENSMUST00000025262 Igkv8-27A0A0G2JF28 120 aa9.65□□□□□ -0.86
Ltb-201ENSMUST00000025262 Lyrm7Q9DA03 104 aa9.64□□□□□ -0.87
Ltb-201ENSMUST00000025262 Krtap9-5A2A5X3 358 aa9.6□□□□□ -0.87
Ltb-201ENSMUST00000025262 Krtap4-9B1AQA9 244 aa9.6□□□□□ -0.87
Ltb-201ENSMUST00000025262 7530416G11RikJ3QJX6 159 aa9.6□□□□□ -0.87
Ltb-201ENSMUST00000025262 Pde6gP09174 87 aa9.6□□□□□ -0.87
Ltb-201ENSMUST00000025262 Trav14d-3-dv8A0A075B619 120 aa9.59□□□□□ -0.87
Ltb-201ENSMUST00000025262 Cypt15B1AXS0 87 aa9.59□□□□□ -0.87
Ltb-201ENSMUST00000025262 P06320 134 aa9.59□□□□□ -0.87
Ltb-201ENSMUST00000025262 Rbm3O89086 153 aaKnown RBP9.58□□□□□ -0.88
Ltb-201ENSMUST00000025262 Cox6a2P43023 97 aa9.57□□□□□ -0.88
Ltb-201ENSMUST00000025262 Trav3-1Q5R1I8 114 aa9.57□□□□□ -0.88
Ltb-201ENSMUST00000025262 Gm12353A2AGJ4 60 aa9.56□□□□□ -0.88
Ltb-201ENSMUST00000025262 Krtap19-2Q925I0 141 aa9.56□□□□□ -0.88
Ltb-201ENSMUST00000025262 Rnase13Q5GAM7 153 aa9.55□□□□□ -0.88
Ltb-201ENSMUST00000025262 Chchd10Q7TNL9 138 aa9.55□□□□□ -0.88
Ltb-201ENSMUST00000025262 Ormdl1Q921I0 153 aa9.55□□□□□ -0.88
Ltb-201ENSMUST00000025262 Chtf8P0CG14 533 aa9.54□□□□□ -0.88
Ltb-201ENSMUST00000025262 Sprr2jO70561 109 aa9.53□□□□□ -0.88
Ltb-201ENSMUST00000025262 Cby1Q9D1C2 127 aa9.49□□□□□ -0.89
Ltb-201ENSMUST00000025262 Fsip2A2ARZ3 6995 aa9.47□□□□□ -0.89
Ltb-201ENSMUST00000025262 BatfO35284 125 aa9.45□□□□□ -0.9
Ltb-201ENSMUST00000025262 Ubl5Q9EPV8 73 aa9.43□□□□□ -0.9
Ltb-201ENSMUST00000025262 Igkv8-19A0A0G2JFN8 121 aa9.42□□□□□ -0.9
Ltb-201ENSMUST00000025262 Igkv3-3A0A140T8Q0 119 aa9.42□□□□□ -0.9
Ltb-201ENSMUST00000025262 Reg3aO09037 175 aa9.42□□□□□ -0.9
Ltb-201ENSMUST00000025262 Mt4P47945 62 aa9.36□□□□□ -0.91
Ltb-201ENSMUST00000025262 Gm37013Q8K491 104 aa9.36□□□□□ -0.91
Ltb-201ENSMUST00000025262 Tmem254aP0DN89 123 aa9.35□□□□□ -0.91
Ltb-201ENSMUST00000025262 Tmem254bP0DN90 123 aa9.35□□□□□ -0.91
Ltb-201ENSMUST00000025262 Tmem254cP0DN91 123 aa9.35□□□□□ -0.91
Ltb-201ENSMUST00000025262 Krtap13-1Q8K198 168 aa9.35□□□□□ -0.91
Ltb-201ENSMUST00000025262 Krtap6-3A0A087WQL6 57 aa9.33□□□□□ -0.92
Ltb-201ENSMUST00000025262 Tmem213Q08EA8 116 aa9.33□□□□□ -0.92
Ltb-201ENSMUST00000025262 Mrpl34Q99N91 92 aa9.33□□□□□ -0.92
Ltb-201ENSMUST00000025262 MplkipQ9D011 178 aa9.33□□□□□ -0.92
Ltb-201ENSMUST00000025262 Apoc4Q61268 124 aa9.32□□□□□ -0.92
Ltb-201ENSMUST00000025262 Gm44790A0A0N4SV91 103 aa9.31□□□□□ -0.92
Ltb-201ENSMUST00000025262 Gm20604F8WIA3 75 aa9.3□□□□□ -0.92
Ltb-201ENSMUST00000025262 UqcrqQ9CQ69 82 aa9.3□□□□□ -0.92
Ltb-201ENSMUST00000025262 Atp5eP56382 52 aa9.29□□□□□ -0.92
Ltb-201ENSMUST00000025262 Defa21Q8C1P2 93 aa9.29□□□□□ -0.92
Ltb-201ENSMUST00000025262 C130032M10RikQ8C888 123 aa9.29□□□□□ -0.92
Ltb-201ENSMUST00000025262 Prm2P07978 107 aa9.26□□□□□ -0.93
Ltb-201ENSMUST00000025262 Krtap4-13Q9D7P3 165 aa9.26□□□□□ -0.93
Ltb-201ENSMUST00000025262 Gm6358A0A087WPH4 74 aa9.24□□□□□ -0.93
Ltb-201ENSMUST00000025262 Gm17416Q30KP4 66 aa9.23□□□□□ -0.93
Ltb-201ENSMUST00000025262 Hist1h4aP62806 103 aaKnown RBP9.19□□□□□ -0.94
Ltb-201ENSMUST00000025262 Krtap1-5A2A590 122 aa9.18□□□□□ -0.94
Ltb-201ENSMUST00000025262 Anapc13Q8R034 74 aa9.16□□□□□ -0.94
Ltb-201ENSMUST00000025262 Scgb1b2O35176 93 aa9.11□□□□□ -0.95
Ltb-201ENSMUST00000025262 Krtap12-1Q9Z287 130 aa9.1□□□□□ -0.95
Ltb-201ENSMUST00000025262 Gm28539A0A087WSL9 92 aa9.09□□□□□ -0.95
Ltb-201ENSMUST00000025262 Prr15lQ8JZM2 100 aa9.09□□□□□ -0.95
Ltb-201ENSMUST00000025262 Ndufc1Q9CQY9 76 aa9.09□□□□□ -0.95
Ltb-201ENSMUST00000025262 Gm10267M0QWD8 85 aa9.04□□□□□ -0.96
Ltb-201ENSMUST00000025262 Krtap3-2Q9D638 99 aa9.04□□□□□ -0.96
Ltb-201ENSMUST00000025262 Krtap3-3Q9D7P0 99 aa9.04□□□□□ -0.96
Ltb-201ENSMUST00000025262 Pla2g10Q9QXX3 151 aa9.04□□□□□ -0.96
Ltb-201ENSMUST00000025262 BikO70337 150 aa9.02□□□□□ -0.97
Ltb-201ENSMUST00000025262 Fam229bQ8CF36 80 aa8.99□□□□□ -0.97
Ltb-201ENSMUST00000025262 Defb13Q8R2I4 64 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 90 ms