RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Krtap14O08640 167 aa8.69□□□□□ -1.02
Col2a1-201ENSMUST00000023123 Trank1Q8BV79 2999 aa8.68□□□□□ -1.02
Col2a1-201ENSMUST00000023123 2310061N02RikQ9D6S9 174 aa8.67□□□□□ -1.02
Col2a1-201ENSMUST00000023123 Celsr2Q9R0M0 2920 aa8.66□□□□□ -1.02
Col2a1-201ENSMUST00000023123 Chd9Q8BYH8 2885 aa8.65□□□□□ -1.02
Col2a1-201ENSMUST00000023123 Rps29P62274 56 aa8.65□□□□□ -1.02
Col2a1-201ENSMUST00000023123 Tenm4Q3UHK6 2771 aa8.65□□□□□ -1.03
Col2a1-201ENSMUST00000023123 RelnQ60841 3461 aa8.62□□□□□ -1.03
Col2a1-201ENSMUST00000023123 SpegQ62407 3262 aa8.61□□□□□ -1.03
Col2a1-201ENSMUST00000023123 Tnp2P11378 117 aa8.59□□□□□ -1.03
Col2a1-201ENSMUST00000023123 Myo15aQ9QZZ4 3511 aa8.58□□□□□ -1.04
Col2a1-201ENSMUST00000023123 D6Ertd527eA0A0N4SWI3 464 aa8.58□□□□□ -1.04
Col2a1-201ENSMUST00000023123 Nf1Q04690 2841 aa8.55□□□□□ -1.04
Col2a1-201ENSMUST00000023123 TgO08710 2766 aa8.53□□□□□ -1.04
Col2a1-201ENSMUST00000023123 Tenm3Q9WTS6 2715 aa8.52□□□□□ -1.05
Col2a1-201ENSMUST00000023123 Gm9507D3Z5T3 223 aa8.51□□□□□ -1.05
Col2a1-201ENSMUST00000023123 FcgbpE9Q0B5 2583 aa8.49□□□□□ -1.05
Col2a1-201ENSMUST00000023123 DmdP11531 3678 aa8.49□□□□□ -1.05
Col2a1-201ENSMUST00000023123 Ndufaf8A2AMZ4 74 aa8.48□□□□□ -1.05
Col2a1-201ENSMUST00000023123 LrbaQ9ESE1 2856 aa8.45□□□□□ -1.06
Col2a1-201ENSMUST00000023123 Pdzd2E9Q1M1 2796 aa8.41□□□□□ -1.06
Col2a1-201ENSMUST00000023123 Srrm2Q8BTI8 2703 aaKnown RBP8.4□□□□□ -1.06
Col2a1-201ENSMUST00000023123 Krtap10-4Q08EG8 221 aa8.39□□□□□ -1.07
Col2a1-201ENSMUST00000023123 ApcQ61315 2845 aa8.38□□□□□ -1.07
Col2a1-201ENSMUST00000023123 Akap9Q70FJ1 3797 aa8.36□□□□□ -1.07
Col2a1-201ENSMUST00000023123 Vps13cQ8BX70 3748 aa8.32□□□□□ -1.08
Col2a1-201ENSMUST00000023123 Krtap10-10A0A1W2P7T6 217 aa8.27□□□□□ -1.09
Col2a1-201ENSMUST00000023123 Gm40193A0A1B0GT39 78 aa8.26□□□□□ -1.09
Col2a1-201ENSMUST00000023123 Muc5acE9QAQ8 3455 aa8.24□□□□□ -1.09
Col2a1-201ENSMUST00000023123 Gm21887J3QQ04 176 aa8.24□□□□□ -1.09
Col2a1-201ENSMUST00000023123 Gm9112A2AI92 75 aa8.23□□□□□ -1.09
Col2a1-201ENSMUST00000023123 Zfhx3Q61329 3726 aa8.2□□□□□ -1.1
Col2a1-201ENSMUST00000023123 Gm20537G3UYK7 97 aa8.19□□□□□ -1.1
Col2a1-201ENSMUST00000023123 Helz2E9QAM5 2947 aaKnown RBP8.17□□□□□ -1.1
Col2a1-201ENSMUST00000023123 Zfhx4Q9JJN2 3550 aa8.12□□□□□ -1.11
Col2a1-201ENSMUST00000023123 Tnp1P10856 55 aa8.1□□□□□ -1.11
Col2a1-201ENSMUST00000023123 OtogO55225 2910 aa8.06□□□□□ -1.12
Col2a1-201ENSMUST00000023123 A930033H14RikG5E8X6 103 aa8.06□□□□□ -1.12
Col2a1-201ENSMUST00000023123 Gm2696A0A1W2P709 240 aa8.05□□□□□ -1.12
Col2a1-201ENSMUST00000023123 Lama5Q61001 3718 aa8.04□□□□□ -1.12
Col2a1-201ENSMUST00000023123 Gm5965D3Z724 196 aa8.02□□□□□ -1.13
Col2a1-201ENSMUST00000023123 2310079G19RikQ9D6L6 185 aa8.01□□□□□ -1.13
Col2a1-201ENSMUST00000023123 Smg1Q8BKX6 3658 aaKnown RBP8□□□□□ -1.13
Col2a1-201ENSMUST00000023123 B930094E09RikQ8C4T2 136 aa7.95□□□□□ -1.14
Col2a1-201ENSMUST00000023123 Tenm1Q9WTS4 2731 aa7.94□□□□□ -1.14
Col2a1-201ENSMUST00000023123 SpenQ62504 3644 aaKnown RBP7.94□□□□□ -1.14
Col2a1-201ENSMUST00000023123 Csmd1Q923L3 3564 aa7.93□□□□□ -1.14
Col2a1-201ENSMUST00000023123 Tenm2Q9WTS5 2764 aa7.84□□□□□ -1.15
Col2a1-201ENSMUST00000023123 Fbn1Q61554 2873 aaKnown RBP7.82□□□□□ -1.16
Col2a1-201ENSMUST00000023123 2310057N15RikQ9D6T8 200 aa7.81□□□□□ -1.16
Col2a1-201ENSMUST00000023123 Gm17416Q30KP4 66 aa7.78□□□□□ -1.16
Col2a1-201ENSMUST00000023123 Gm884A2A9H6 3643 aa7.76□□□□□ -1.17
Col2a1-201ENSMUST00000023123 VwfQ8CIZ8 2813 aa7.68□□□□□ -1.18
Col2a1-201ENSMUST00000023123 Prm2P07978 107 aa7.65□□□□□ -1.18
Col2a1-201ENSMUST00000023123 Gm17402F6Z0L5 76 aa7.64□□□□□ -1.19
Col2a1-201ENSMUST00000023123 Col7a1Q63870 2944 aa7.64□□□□□ -1.19
Col2a1-201ENSMUST00000023123 2210017I01RikA0A0A6YVV1 95 aa7.64□□□□□ -1.19
Col2a1-201ENSMUST00000023123 Svep1A2AVA0 3567 aa7.63□□□□□ -1.19
Col2a1-201ENSMUST00000023123 Muc4Q8JZM8 3443 aa7.53□□□□□ -1.2
Col2a1-201ENSMUST00000023123 Megf8P60882 2789 aa7.49□□□□□ -1.21
Col2a1-201ENSMUST00000023123 Cmya5Q70KF4 3739 aa7.45□□□□□ -1.22
Col2a1-201ENSMUST00000023123 Ank2Q8C8R3 3898 aa7.44□□□□□ -1.22
Col2a1-201ENSMUST00000023123 Muc6Q80T03 2850 aa7.43□□□□□ -1.22
Col2a1-201ENSMUST00000023123 Gm9736A0A1W2P7N1 277 aa7.38□□□□□ -1.23
Col2a1-201ENSMUST00000023123 Gm11939A2A592 99 aa7.36□□□□□ -1.23
Col2a1-201ENSMUST00000023123 Gm9918Q8BUR5 174 aa7.34□□□□□ -1.23
Col2a1-201ENSMUST00000023123 Csmd2V9GX34 3611 aa7.32□□□□□ -1.24
Col2a1-201ENSMUST00000023123 Krtap3-2Q9D638 99 aa7.23□□□□□ -1.25
Col2a1-201ENSMUST00000023123 Krtap3-3Q9D7P0 99 aa7.23□□□□□ -1.25
Col2a1-201ENSMUST00000023123 Gm19668J3QMD1 248 aa7.21□□□□□ -1.25
Col2a1-201ENSMUST00000023123 4933428G20RikQ9D3X4 101 aa7.15□□□□□ -1.26
Col2a1-201ENSMUST00000023123 Krtap13-1Q8K198 168 aa7.14□□□□□ -1.27
Col2a1-201ENSMUST00000023123 Krtap3-1A2A591 98 aa7.11□□□□□ -1.27
Col2a1-201ENSMUST00000023123 Krtap19-5O08632 62 aa7.06□□□□□ -1.28
Col2a1-201ENSMUST00000023123 Dnah14A0A140LIJ4 4489 aa7.01□□□□□ -1.29
Col2a1-201ENSMUST00000023123 LystP97412 3788 aa6.98□□□□□ -1.29
Col2a1-201ENSMUST00000023123 CubnQ9JLB4 3623 aa6.93□□□□□ -1.3
Col2a1-201ENSMUST00000023123 Gm10318A0A1W2P728 225 aa6.93□□□□□ -1.3
Col2a1-201ENSMUST00000023123 Huwe1Q7TMY8 4377 aaKnown RBP6.81□□□□□ -1.32
Col2a1-201ENSMUST00000023123 Crct1Q6PAI5 102 aa6.79□□□□□ -1.32
Col2a1-201ENSMUST00000023123 BsnO88737 3942 aa6.73□□□□□ -1.33
Col2a1-201ENSMUST00000023123 Xirp2Q4U4S6 3784 aa6.7□□□□□ -1.34
Col2a1-201ENSMUST00000023123 Dnah10D3YYQ8 4591 aa6.69□□□□□ -1.34
Col2a1-201ENSMUST00000023123 Krtap7-1Q9D3I6 87 aa6.67□□□□□ -1.34
Col2a1-201ENSMUST00000023123 Sprr2a3Q4KL71 83 aa6.64□□□□□ -1.35
Col2a1-201ENSMUST00000023123 Sprr2a1Q9CQK8 83 aa6.64□□□□□ -1.35
Col2a1-201ENSMUST00000023123 Dnah5Q8VHE6 4621 aa6.63□□□□□ -1.35
Col2a1-201ENSMUST00000023123 Hspg2Q05793 3707 aaKnown RBP6.58□□□□□ -1.36
Col2a1-201ENSMUST00000023123 PlecQ9QXS1 4691 aaKnown RBP6.57□□□□□ -1.36
Col2a1-201ENSMUST00000023123 Krtap1-5A2A590 122 aa6.57□□□□□ -1.36
Col2a1-201ENSMUST00000023123 Vps13dB1ART2 4390 aa6.55□□□□□ -1.36
Col2a1-201ENSMUST00000023123 Dnah17Q69Z23 4481 aa6.55□□□□□ -1.36
Col2a1-201ENSMUST00000023123 Stard9Q80TF6 4561 aa6.54□□□□□ -1.36
Col2a1-201ENSMUST00000023123 Csmd3Q80T79 3707 aa6.47□□□□□ -1.37
Col2a1-201ENSMUST00000023123 TnxbO35452 4006 aa6.41□□□□□ -1.38
Col2a1-201ENSMUST00000023123 Krtap19-9aF8WH65 55 aa6.4□□□□□ -1.39
Col2a1-201ENSMUST00000023123 Ryr1E9PZQ0 5035 aa6.37□□□□□ -1.39
Col2a1-201ENSMUST00000023123 Dnah11E9Q7N9 4488 aa6.35□□□□□ -1.39
Col2a1-201ENSMUST00000023123 Gm6358A0A087WPH4 74 aa6.35□□□□□ -1.39
Col2a1-201ENSMUST00000023123 Krtap1-4Q3V2D6 188 aa6.35□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms