RNA–Protein interactions for RNA: ENSMUST00000021921.10

Ptch1-201, Transcript of Protein patched homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ptch1, Length 7,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1-201ENSMUST00000021921 4933428G20RikQ9D3X4 101 aa8.11□□□□□ -1.11
Ptch1-201ENSMUST00000021921 Gm40193A0A1B0GT39 78 aa8.08□□□□□ -1.12
Ptch1-201ENSMUST00000021921 Utp20Q5XG71 2788 aaKnown RBP8.07□□□□□ -1.12
Ptch1-201ENSMUST00000021921 SpegQ62407 3262 aa8.07□□□□□ -1.12
Ptch1-201ENSMUST00000021921 Chd9Q8BYH8 2885 aa8.05□□□□□ -1.12
Ptch1-201ENSMUST00000021921 D6Ertd527eA0A0N4SWI3 464 aa8.05□□□□□ -1.12
Ptch1-201ENSMUST00000021921 Prm2P07978 107 aa8.04□□□□□ -1.12
Ptch1-201ENSMUST00000021921 Col6a5A6H584 2640 aa8.01□□□□□ -1.13
Ptch1-201ENSMUST00000021921 Tex15F8VPN2 2785 aa7.99□□□□□ -1.13
Ptch1-201ENSMUST00000021921 A930033H14RikG5E8X6 103 aa7.98□□□□□ -1.13
Ptch1-201ENSMUST00000021921 Trank1Q8BV79 2999 aa7.97□□□□□ -1.13
Ptch1-201ENSMUST00000021921 Itpr1P11881 2749 aa7.96□□□□□ -1.14
Ptch1-201ENSMUST00000021921 Celsr1O35161 3034 aa7.95□□□□□ -1.14
Ptch1-201ENSMUST00000021921 FrylF8VQ05 3007 aa7.94□□□□□ -1.14
Ptch1-201ENSMUST00000021921 Srrm2Q8BTI8 2703 aaKnown RBP7.92□□□□□ -1.14
Ptch1-201ENSMUST00000021921 LrbaQ9ESE1 2856 aa7.87□□□□□ -1.15
Ptch1-201ENSMUST00000021921 Zzef1Q5SSH7 2924 aa7.85□□□□□ -1.15
Ptch1-201ENSMUST00000021921 FcgbpE9Q0B5 2583 aa7.83□□□□□ -1.16
Ptch1-201ENSMUST00000021921 Chd7A2AJK6 2986 aaKnown RBP7.82□□□□□ -1.16
Ptch1-201ENSMUST00000021921 B930094E09RikQ8C4T2 136 aa7.82□□□□□ -1.16
Ptch1-201ENSMUST00000021921 Igfn1Q3KNY0 2849 aa7.79□□□□□ -1.16
Ptch1-201ENSMUST00000021921 2310061N02RikQ9D6S9 174 aa7.79□□□□□ -1.16
Ptch1-201ENSMUST00000021921 Hivep1Q03172 2688 aa7.76□□□□□ -1.17
Ptch1-201ENSMUST00000021921 Gm11565A2A4M7 156 aa7.76□□□□□ -1.17
Ptch1-201ENSMUST00000021921 Gm20537G3UYK7 97 aa7.72□□□□□ -1.17
Ptch1-201ENSMUST00000021921 Fbn2Q61555 2907 aa7.71□□□□□ -1.17
Ptch1-201ENSMUST00000021921 Adgrg4B7ZCC9 3073 aa7.66□□□□□ -1.18
Ptch1-201ENSMUST00000021921 Csmd1Q923L3 3564 aa7.65□□□□□ -1.18
Ptch1-201ENSMUST00000021921 Tenm1Q9WTS4 2731 aa7.64□□□□□ -1.19
Ptch1-201ENSMUST00000021921 Akap9Q70FJ1 3797 aa7.61□□□□□ -1.19
Ptch1-201ENSMUST00000021921 NbeaQ9EPN1 2936 aa7.57□□□□□ -1.2
Ptch1-201ENSMUST00000021921 Zfhx4Q9JJN2 3550 aa7.57□□□□□ -1.2
Ptch1-201ENSMUST00000021921 FlncQ8VHX6 2726 aaKnown RBP7.57□□□□□ -1.2
Ptch1-201ENSMUST00000021921 Gm10318A0A1W2P728 225 aa7.55□□□□□ -1.2
Ptch1-201ENSMUST00000021921 Nf1Q04690 2841 aa7.54□□□□□ -1.2
Ptch1-201ENSMUST00000021921 TgO08710 2766 aa7.46□□□□□ -1.22
Ptch1-201ENSMUST00000021921 RelnQ60841 3461 aa7.44□□□□□ -1.22
Ptch1-201ENSMUST00000021921 Gm9736A0A1W2P7N1 277 aa7.44□□□□□ -1.22
Ptch1-201ENSMUST00000021921 Vps13cQ8BX70 3748 aa7.44□□□□□ -1.22
Ptch1-201ENSMUST00000021921 DmdP11531 3678 aa7.43□□□□□ -1.22
Ptch1-201ENSMUST00000021921 Gm6358A0A087WPH4 74 aa7.41□□□□□ -1.22
Ptch1-201ENSMUST00000021921 Smg1Q8BKX6 3658 aaKnown RBP7.4□□□□□ -1.22
Ptch1-201ENSMUST00000021921 Pdzd2E9Q1M1 2796 aa7.38□□□□□ -1.23
Ptch1-201ENSMUST00000021921 Muc2Q80Z19 2680 aa7.36□□□□□ -1.23
Ptch1-201ENSMUST00000021921 Gm19668J3QMD1 248 aa7.33□□□□□ -1.24
Ptch1-201ENSMUST00000021921 Muc5acE9QAQ8 3455 aa7.3□□□□□ -1.24
Ptch1-201ENSMUST00000021921 SpenQ62504 3644 aaKnown RBP7.29□□□□□ -1.24
Ptch1-201ENSMUST00000021921 Cmya5Q70KF4 3739 aa7.26□□□□□ -1.25
Ptch1-201ENSMUST00000021921 SmcpP15265 143 aa7.26□□□□□ -1.25
Ptch1-201ENSMUST00000021921 Crct1Q6PAI5 102 aa7.25□□□□□ -1.25
Ptch1-201ENSMUST00000021921 Celsr2Q9R0M0 2920 aa7.22□□□□□ -1.25
Ptch1-201ENSMUST00000021921 Tenm3Q9WTS6 2715 aa7.22□□□□□ -1.25
Ptch1-201ENSMUST00000021921 Megf8P60882 2789 aa7.2□□□□□ -1.26
Ptch1-201ENSMUST00000021921 VwfQ8CIZ8 2813 aa7.2□□□□□ -1.26
Ptch1-201ENSMUST00000021921 Sprr2kO70562 68 aa7.18□□□□□ -1.26
Ptch1-201ENSMUST00000021921 2210017I01RikA0A0A6YVV1 95 aa7.17□□□□□ -1.26
Ptch1-201ENSMUST00000021921 Tenm4Q3UHK6 2771 aa7.16□□□□□ -1.26
Ptch1-201ENSMUST00000021921 2310079G19RikQ9D6L6 185 aa7.15□□□□□ -1.27
Ptch1-201ENSMUST00000021921 Csmd2V9GX34 3611 aa7.12□□□□□ -1.27
Ptch1-201ENSMUST00000021921 Gm17402F6Z0L5 76 aa7.09□□□□□ -1.27
Ptch1-201ENSMUST00000021921 Gm18596A0A1W2P860 280 aa7.08□□□□□ -1.28
Ptch1-201ENSMUST00000021921 Lama5Q61001 3718 aa7.07□□□□□ -1.28
Ptch1-201ENSMUST00000021921 Gm17416Q30KP4 66 aa7.05□□□□□ -1.28
Ptch1-201ENSMUST00000021921 OtogO55225 2910 aa7□□□□□ -1.29
Ptch1-201ENSMUST00000021921 Tenm2Q9WTS5 2764 aa6.99□□□□□ -1.29
Ptch1-201ENSMUST00000021921 Gm884A2A9H6 3643 aa6.98□□□□□ -1.29
Ptch1-201ENSMUST00000021921 Svep1A2AVA0 3567 aa6.93□□□□□ -1.3
Ptch1-201ENSMUST00000021921 Helz2E9QAM5 2947 aaKnown RBP6.93□□□□□ -1.3
Ptch1-201ENSMUST00000021921 Gm19402J3QJV4 266 aa6.92□□□□□ -1.3
Ptch1-201ENSMUST00000021921 Muc4Q8JZM8 3443 aa6.89□□□□□ -1.31
Ptch1-201ENSMUST00000021921 Sprr2gO70558 76 aa6.81□□□□□ -1.32
Ptch1-201ENSMUST00000021921 Krtap13-1Q8K198 168 aa6.78□□□□□ -1.32
Ptch1-201ENSMUST00000021921 Krtap8-1O08633 61 aa6.75□□□□□ -1.33
Ptch1-201ENSMUST00000021921 CubnQ9JLB4 3623 aa6.71□□□□□ -1.34
Ptch1-201ENSMUST00000021921 Ank2Q8C8R3 3898 aa6.66□□□□□ -1.34
Ptch1-201ENSMUST00000021921 Col7a1Q63870 2944 aa6.64□□□□□ -1.35
Ptch1-201ENSMUST00000021921 Krtap7-1Q9D3I6 87 aa6.63□□□□□ -1.35
Ptch1-201ENSMUST00000021921 LystP97412 3788 aa6.55□□□□□ -1.36
Ptch1-201ENSMUST00000021921 Csmd3Q80T79 3707 aa6.52□□□□□ -1.37
Ptch1-201ENSMUST00000021921 Gm11939A2A592 99 aa6.52□□□□□ -1.37
Ptch1-201ENSMUST00000021921 Krtap19-5O08632 62 aa6.5□□□□□ -1.37
Ptch1-201ENSMUST00000021921 Fbn1Q61554 2873 aaKnown RBP6.48□□□□□ -1.37
Ptch1-201ENSMUST00000021921 Muc6Q80T03 2850 aa6.42□□□□□ -1.38
Ptch1-201ENSMUST00000021921 Hspg2Q05793 3707 aaKnown RBP6.34□□□□□ -1.39
Ptch1-201ENSMUST00000021921 Krtap19-9aF8WH65 55 aa6.3□□□□□ -1.4
Ptch1-201ENSMUST00000021921 Krtap3-1A2A591 98 aa6.29□□□□□ -1.4
Ptch1-201ENSMUST00000021921 2310046K23RikA0A0A6YVW6 87 aa6.28□□□□□ -1.4
Ptch1-201ENSMUST00000021921 Xirp2Q4U4S6 3784 aa6.19□□□□□ -1.42
Ptch1-201ENSMUST00000021921 BsnO88737 3942 aa6.19□□□□□ -1.42
Ptch1-201ENSMUST00000021921 LorP18165 486 aa6.16□□□□□ -1.42
Ptch1-201ENSMUST00000021921 Krtap12-1Q9Z287 130 aa6.15□□□□□ -1.43
Ptch1-201ENSMUST00000021921 Lce3bQ9CQM7 98 aa6.12□□□□□ -1.43
Ptch1-201ENSMUST00000021921 Krtap19-9bQ99NG9 58 aa6.1□□□□□ -1.43
Ptch1-201ENSMUST00000021921 Lce3cQ91V05 98 aa6.08□□□□□ -1.44
Ptch1-201ENSMUST00000021921 Sprr2fO70557 76 aa5.99□□□□□ -1.45
Ptch1-201ENSMUST00000021921 Sprr2iO70560 76 aa5.91□□□□□ -1.46
Ptch1-201ENSMUST00000021921 Sprr2a3Q4KL71 83 aa5.88□□□□□ -1.47
Ptch1-201ENSMUST00000021921 Sprr2a1Q9CQK8 83 aa5.88□□□□□ -1.47
Ptch1-201ENSMUST00000021921 Huwe1Q7TMY8 4377 aaKnown RBP5.87□□□□□ -1.47
Ptch1-201ENSMUST00000021921 Krtap1-4Q3V2D6 188 aa5.85□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 64 ms