RNA–Protein interactions for RNA: ENSMUST00000004428.13

Clcn5-201, Transcript of H(+)/Cl(-) exchange transporter 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn5, Length 8,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5-201ENSMUST00000004428 Chd9Q8BYH8 2885 aa3.6□□□□□ -1.83
Clcn5-201ENSMUST00000004428 Gm17349F7BGH6 99 aa3.6□□□□□ -1.83
Clcn5-201ENSMUST00000004428 Celsr2Q9R0M0 2920 aa3.6□□□□□ -1.83
Clcn5-201ENSMUST00000004428 TgO08710 2766 aa3.6□□□□□ -1.83
Clcn5-201ENSMUST00000004428 Ranbp2Q9ERU9 3053 aaKnown RBP3.6□□□□□ -1.83
Clcn5-201ENSMUST00000004428 LrbaQ9ESE1 2856 aa3.59□□□□□ -1.83
Clcn5-201ENSMUST00000004428 ApcQ61315 2845 aa3.59□□□□□ -1.83
Clcn5-201ENSMUST00000004428 Cdh23Q99PF4 3354 aa3.59□□□□□ -1.83
Clcn5-201ENSMUST00000004428 Celsr1O35161 3034 aa3.58□□□□□ -1.84
Clcn5-201ENSMUST00000004428 A930033H14RikG5E8X6 103 aa3.58□□□□□ -1.84
Clcn5-201ENSMUST00000004428 Lrrc37aB1AWG4 3215 aa3.58□□□□□ -1.84
Clcn5-201ENSMUST00000004428 AtmQ62388 3066 aa3.58□□□□□ -1.84
Clcn5-201ENSMUST00000004428 Adgrg4B7ZCC9 3073 aa3.57□□□□□ -1.84
Clcn5-201ENSMUST00000004428 Gm3233E9Q2H5 230 aa3.56□□□□□ -1.84
Clcn5-201ENSMUST00000004428 Szt2A2A9C3 3431 aa3.54□□□□□ -1.84
Clcn5-201ENSMUST00000004428 2310061N02RikQ9D6S9 174 aa3.54□□□□□ -1.84
Clcn5-201ENSMUST00000004428 Lama1P19137 3084 aa3.52□□□□□ -1.85
Clcn5-201ENSMUST00000004428 Tenm1Q9WTS4 2731 aa3.51□□□□□ -1.85
Clcn5-201ENSMUST00000004428 Gm7138L7N2C3 230 aa3.48□□□□□ -1.85
Clcn5-201ENSMUST00000004428 Gm3238W4VSP7 230 aa3.48□□□□□ -1.85
Clcn5-201ENSMUST00000004428 Gm36176A0A1W2P8D5 158 aa3.46□□□□□ -1.85
Clcn5-201ENSMUST00000004428 2210017I01RikA0A0A6YVV1 95 aa3.42□□□□□ -1.86
Clcn5-201ENSMUST00000004428 Gm7137J3QMW1 236 aa3.4□□□□□ -1.87
Clcn5-201ENSMUST00000004428 2310079G19RikQ9D6L6 185 aa3.38□□□□□ -1.87
Clcn5-201ENSMUST00000004428 Frem2Q6NVD0 3160 aa3.38□□□□□ -1.87
Clcn5-201ENSMUST00000004428 Megf8P60882 2789 aa3.37□□□□□ -1.87
Clcn5-201ENSMUST00000004428 Gm9508A0A1W2P7W0 230 aa3.35□□□□□ -1.87
Clcn5-201ENSMUST00000004428 Helz2E9QAM5 2947 aaKnown RBP3.35□□□□□ -1.87
Clcn5-201ENSMUST00000004428 Unc80Q8BLN6 3261 aa3.35□□□□□ -1.87
Clcn5-201ENSMUST00000004428 OtogO55225 2910 aa3.32□□□□□ -1.88
Clcn5-201ENSMUST00000004428 Dchs2A0A0A6YW72 3346 aa3.32□□□□□ -1.88
Clcn5-201ENSMUST00000004428 SpegQ62407 3262 aa3.29□□□□□ -1.88
Clcn5-201ENSMUST00000004428 Ank2Q8C8R3 3898 aa3.28□□□□□ -1.88
Clcn5-201ENSMUST00000004428 VwfQ8CIZ8 2813 aa3.27□□□□□ -1.89
Clcn5-201ENSMUST00000004428 Celsr3Q91ZI0 3301 aa3.26□□□□□ -1.89
Clcn5-201ENSMUST00000004428 Tenm2Q9WTS5 2764 aa3.24□□□□□ -1.89
Clcn5-201ENSMUST00000004428 Brca2P97929 3329 aa3.23□□□□□ -1.89
Clcn5-201ENSMUST00000004428 Col6a3E9PWQ3 3284 aa3.23□□□□□ -1.89
Clcn5-201ENSMUST00000004428 Gm19668J3QMD1 248 aa3.21□□□□□ -1.89
Clcn5-201ENSMUST00000004428 Fbn1Q61554 2873 aaKnown RBP3.21□□□□□ -1.9
Clcn5-201ENSMUST00000004428 VcanQ62059 3357 aa3.21□□□□□ -1.9
Clcn5-201ENSMUST00000004428 Gm9507D3Z5T3 223 aa3.2□□□□□ -1.9
Clcn5-201ENSMUST00000004428 Muc6Q80T03 2850 aa3.2□□□□□ -1.9
Clcn5-201ENSMUST00000004428 Krtap10-10A0A1W2P7T6 217 aa3.16□□□□□ -1.9
Clcn5-201ENSMUST00000004428 Vps13cQ8BX70 3748 aa3.15□□□□□ -1.9
Clcn5-201ENSMUST00000004428 RelnQ60841 3461 aa3.15□□□□□ -1.91
Clcn5-201ENSMUST00000004428 Zfhx4Q9JJN2 3550 aa3.14□□□□□ -1.91
Clcn5-201ENSMUST00000004428 Col7a1Q63870 2944 aa3.14□□□□□ -1.91
Clcn5-201ENSMUST00000004428 Krtap31-2Q8CAY5 177 aa3.12□□□□□ -1.91
Clcn5-201ENSMUST00000004428 Akap9Q70FJ1 3797 aa3.12□□□□□ -1.91
Clcn5-201ENSMUST00000004428 Dchs1E9PVD3 3291 aa3.11□□□□□ -1.91
Clcn5-201ENSMUST00000004428 DmdP11531 3678 aa3.11□□□□□ -1.91
Clcn5-201ENSMUST00000004428 Wdfy3Q6VNB8 3508 aa3.09□□□□□ -1.91
Clcn5-201ENSMUST00000004428 Muc5acE9QAQ8 3455 aa3.08□□□□□ -1.92
Clcn5-201ENSMUST00000004428 Krtap10-4Q08EG8 221 aa3.07□□□□□ -1.92
Clcn5-201ENSMUST00000004428 Gm2696A0A1W2P709 240 aa3.03□□□□□ -1.92
Clcn5-201ENSMUST00000004428 Gm9918Q8BUR5 174 aa3.02□□□□□ -1.93
Clcn5-201ENSMUST00000004428 Krtap31-1Q9D644 177 aa3.02□□□□□ -1.93
Clcn5-201ENSMUST00000004428 Krtap13-1Q8K198 168 aa3.01□□□□□ -1.93
Clcn5-201ENSMUST00000004428 Muc4Q8JZM8 3443 aa3.01□□□□□ -1.93
Clcn5-201ENSMUST00000004428 Myo15aQ9QZZ4 3511 aa3□□□□□ -1.93
Clcn5-201ENSMUST00000004428 Lama5Q61001 3718 aa3□□□□□ -1.93
Clcn5-201ENSMUST00000004428 Gm11939A2A592 99 aa2.98□□□□□ -1.93
Clcn5-201ENSMUST00000004428 Smg1Q8BKX6 3658 aaKnown RBP2.95□□□□□ -1.94
Clcn5-201ENSMUST00000004428 Krtap19-5O08632 62 aa2.92□□□□□ -1.94
Clcn5-201ENSMUST00000004428 Mt3P28184 68 aa2.92□□□□□ -1.94
Clcn5-201ENSMUST00000004428 TnxbO35452 4006 aa2.89□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Krtap3-2Q9D638 99 aa2.88□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Krtap3-3Q9D7P0 99 aa2.88□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Zfhx3Q61329 3726 aa2.88□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Krtap3-1A2A591 98 aa2.87□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Sprr2a3Q4KL71 83 aa2.86□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Sprr2a1Q9CQK8 83 aa2.86□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Krtap7-1Q9D3I6 87 aa2.84□□□□□ -1.95
Clcn5-201ENSMUST00000004428 Huwe1Q7TMY8 4377 aaKnown RBP2.83□□□□□ -1.96
Clcn5-201ENSMUST00000004428 Krtap19-9bQ99NG9 58 aa2.83□□□□□ -1.96
Clcn5-201ENSMUST00000004428 Gm884A2A9H6 3643 aa2.8□□□□□ -1.96
Clcn5-201ENSMUST00000004428 SpenQ62504 3644 aaKnown RBP2.79□□□□□ -1.96
Clcn5-201ENSMUST00000004428 Svep1A2AVA0 3567 aa2.78□□□□□ -1.96
Clcn5-201ENSMUST00000004428 Vps13dB1ART2 4390 aa2.77□□□□□ -1.97
Clcn5-201ENSMUST00000004428 Cmya5Q70KF4 3739 aa2.77□□□□□ -1.97
Clcn5-201ENSMUST00000004428 Krtap1-5A2A590 122 aa2.76□□□□□ -1.97
Clcn5-201ENSMUST00000004428 Csmd1Q923L3 3564 aa2.76□□□□□ -1.97
Clcn5-201ENSMUST00000004428 2310046K23RikA0A0A6YVW6 87 aa2.75□□□□□ -1.97
Clcn5-201ENSMUST00000004428 Krtap19-9aF8WH65 55 aa2.75□□□□□ -1.97
Clcn5-201ENSMUST00000004428 PrkdcP97313 4128 aa2.75□□□□□ -1.97
Clcn5-201ENSMUST00000004428 Ryr1E9PZQ0 5035 aa2.73□□□□□ -1.97
Clcn5-201ENSMUST00000004428 Gm9736A0A1W2P7N1 277 aa2.72□□□□□ -1.97
Clcn5-201ENSMUST00000004428 Dnah3Q8BW94 4083 aa2.71□□□□□ -1.97
Clcn5-201ENSMUST00000004428 LystP97412 3788 aa2.7□□□□□ -1.98
Clcn5-201ENSMUST00000004428 Gm18596A0A1W2P860 280 aa2.69□□□□□ -1.98
Clcn5-201ENSMUST00000004428 Dync2h1Q45VK7 4306 aa2.69□□□□□ -1.98
Clcn5-201ENSMUST00000004428 Dnah17Q69Z23 4481 aa2.67□□□□□ -1.98
Clcn5-201ENSMUST00000004428 Dnah7bL7N1Y0 4068 aa2.66□□□□□ -1.98
Clcn5-201ENSMUST00000004428 Sprr2kO70562 68 aa2.66□□□□□ -1.98
Clcn5-201ENSMUST00000004428 Dnah14A0A140LIJ4 4489 aa2.66□□□□□ -1.98
Clcn5-201ENSMUST00000004428 Xirp2Q4U4S6 3784 aa2.65□□□□□ -1.99
Clcn5-201ENSMUST00000004428 Csmd2V9GX34 3611 aa2.64□□□□□ -1.99
Clcn5-201ENSMUST00000004428 BsnO88737 3942 aa2.64□□□□□ -1.99
Clcn5-201ENSMUST00000004428 Lrp1bQ9JI18 4599 aa2.64□□□□□ -1.99
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms