RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Nf1Q04690 2841 aa4.79□□□□□ -1.64
Cux1-201ENSMUST00000004097 Chd9Q8BYH8 2885 aa4.78□□□□□ -1.64
Cux1-201ENSMUST00000004097 Gm21887J3QQ04 176 aa4.76□□□□□ -1.65
Cux1-201ENSMUST00000004097 Zfhx4Q9JJN2 3550 aa4.75□□□□□ -1.65
Cux1-201ENSMUST00000004097 Gm16253D3Z167 63 aa4.75□□□□□ -1.65
Cux1-201ENSMUST00000004097 Gm5965D3Z724 196 aa4.74□□□□□ -1.65
Cux1-201ENSMUST00000004097 Igfn1Q3KNY0 2849 aa4.73□□□□□ -1.65
Cux1-201ENSMUST00000004097 Muc5acE9QAQ8 3455 aa4.73□□□□□ -1.65
Cux1-201ENSMUST00000004097 Srrm2Q8BTI8 2703 aaKnown RBP4.72□□□□□ -1.65
Cux1-201ENSMUST00000004097 4933415A04RikQ9D443 101 aa4.72□□□□□ -1.65
Cux1-201ENSMUST00000004097 Myo15bI7HPW8 3033 aa4.71□□□□□ -1.66
Cux1-201ENSMUST00000004097 Fbn2Q61555 2907 aa4.71□□□□□ -1.66
Cux1-201ENSMUST00000004097 Sprr1aQ62266 144 aa4.71□□□□□ -1.66
Cux1-201ENSMUST00000004097 Csmd1Q923L3 3564 aa4.7□□□□□ -1.66
Cux1-201ENSMUST00000004097 Akap9Q70FJ1 3797 aa4.7□□□□□ -1.66
Cux1-201ENSMUST00000004097 Gm2310J3QNJ2 377 aa4.69□□□□□ -1.66
Cux1-201ENSMUST00000004097 A930033H14RikG5E8X6 103 aa4.69□□□□□ -1.66
Cux1-201ENSMUST00000004097 RelnQ60841 3461 aa4.68□□□□□ -1.66
Cux1-201ENSMUST00000004097 Krtap14O08640 167 aa4.68□□□□□ -1.66
Cux1-201ENSMUST00000004097 NbeaQ9EPN1 2936 aa4.67□□□□□ -1.66
Cux1-201ENSMUST00000004097 Gm884A2A9H6 3643 aa4.66□□□□□ -1.66
Cux1-201ENSMUST00000004097 Tnp1P10856 55 aa4.65□□□□□ -1.67
Cux1-201ENSMUST00000004097 Gm9112A2AI92 75 aa4.63□□□□□ -1.67
Cux1-201ENSMUST00000004097 Tenm1Q9WTS4 2731 aa4.63□□□□□ -1.67
Cux1-201ENSMUST00000004097 Vps13cQ8BX70 3748 aa4.61□□□□□ -1.67
Cux1-201ENSMUST00000004097 Smg1Q8BKX6 3658 aaKnown RBP4.61□□□□□ -1.67
Cux1-201ENSMUST00000004097 Cox6b2Q80ZN9 88 aa4.58□□□□□ -1.68
Cux1-201ENSMUST00000004097 Adgrg4B7ZCC9 3073 aa4.57□□□□□ -1.68
Cux1-201ENSMUST00000004097 TgO08710 2766 aa4.54□□□□□ -1.68
Cux1-201ENSMUST00000004097 Tenm3Q9WTS6 2715 aa4.54□□□□□ -1.68
Cux1-201ENSMUST00000004097 Pdzd2E9Q1M1 2796 aa4.53□□□□□ -1.68
Cux1-201ENSMUST00000004097 4933428G20RikQ9D3X4 101 aa4.53□□□□□ -1.68
Cux1-201ENSMUST00000004097 Gm3646F6S692 53 aa4.52□□□□□ -1.69
Cux1-201ENSMUST00000004097 Gm10318A0A1W2P728 225 aa4.51□□□□□ -1.69
Cux1-201ENSMUST00000004097 Celsr2Q9R0M0 2920 aa4.49□□□□□ -1.69
Cux1-201ENSMUST00000004097 Prm2P07978 107 aa4.49□□□□□ -1.69
Cux1-201ENSMUST00000004097 D6Ertd527eA0A0N4SWI3 464 aa4.49□□□□□ -1.69
Cux1-201ENSMUST00000004097 VwfQ8CIZ8 2813 aa4.49□□□□□ -1.69
Cux1-201ENSMUST00000004097 2310061N02RikQ9D6S9 174 aa4.48□□□□□ -1.69
Cux1-201ENSMUST00000004097 Rps29P62274 56 aa4.48□□□□□ -1.69
Cux1-201ENSMUST00000004097 Cystm1Q8K353 104 aa4.46□□□□□ -1.69
Cux1-201ENSMUST00000004097 A730071L15RikQ8C4X0 137 aa4.46□□□□□ -1.7
Cux1-201ENSMUST00000004097 Gm11565A2A4M7 156 aa4.45□□□□□ -1.7
Cux1-201ENSMUST00000004097 Ndufaf8A2AMZ4 74 aa4.45□□□□□ -1.7
Cux1-201ENSMUST00000004097 Cmya5Q70KF4 3739 aa4.43□□□□□ -1.7
Cux1-201ENSMUST00000004097 Lama5Q61001 3718 aa4.42□□□□□ -1.7
Cux1-201ENSMUST00000004097 Svep1A2AVA0 3567 aa4.42□□□□□ -1.7
Cux1-201ENSMUST00000004097 Gm9736A0A1W2P7N1 277 aa4.39□□□□□ -1.71
Cux1-201ENSMUST00000004097 Csmd2V9GX34 3611 aa4.37□□□□□ -1.71
Cux1-201ENSMUST00000004097 Muc4Q8JZM8 3443 aa4.36□□□□□ -1.71
Cux1-201ENSMUST00000004097 Crct1Q6PAI5 102 aa4.35□□□□□ -1.71
Cux1-201ENSMUST00000004097 Tenm4Q3UHK6 2771 aa4.33□□□□□ -1.72
Cux1-201ENSMUST00000004097 Megf8P60882 2789 aa4.33□□□□□ -1.72
Cux1-201ENSMUST00000004097 Helz2E9QAM5 2947 aaKnown RBP4.31□□□□□ -1.72
Cux1-201ENSMUST00000004097 Sprr2kO70562 68 aa4.29□□□□□ -1.72
Cux1-201ENSMUST00000004097 Gm6358A0A087WPH4 74 aa4.24□□□□□ -1.73
Cux1-201ENSMUST00000004097 SmcpP15265 143 aa4.24□□□□□ -1.73
Cux1-201ENSMUST00000004097 Col7a1Q63870 2944 aa4.21□□□□□ -1.73
Cux1-201ENSMUST00000004097 B930094E09RikQ8C4T2 136 aa4.19□□□□□ -1.74
Cux1-201ENSMUST00000004097 Tenm2Q9WTS5 2764 aa4.18□□□□□ -1.74
Cux1-201ENSMUST00000004097 1700042G07RikB1AUF7 90 aa4.18□□□□□ -1.74
Cux1-201ENSMUST00000004097 Gm20537G3UYK7 97 aa4.18□□□□□ -1.74
Cux1-201ENSMUST00000004097 LystP97412 3788 aa4.17□□□□□ -1.74
Cux1-201ENSMUST00000004097 Gm40193A0A1B0GT39 78 aa4.15□□□□□ -1.74
Cux1-201ENSMUST00000004097 OtogO55225 2910 aa4.14□□□□□ -1.75
Cux1-201ENSMUST00000004097 CubnQ9JLB4 3623 aa4.1□□□□□ -1.75
Cux1-201ENSMUST00000004097 Sprr2gO70558 76 aa4.06□□□□□ -1.76
Cux1-201ENSMUST00000004097 Ank2Q8C8R3 3898 aa4.04□□□□□ -1.76
Cux1-201ENSMUST00000004097 Gm19668J3QMD1 248 aa4.03□□□□□ -1.76
Cux1-201ENSMUST00000004097 Fbn1Q61554 2873 aaKnown RBP4.03□□□□□ -1.76
Cux1-201ENSMUST00000004097 Gm18596A0A1W2P860 280 aa3.99□□□□□ -1.77
Cux1-201ENSMUST00000004097 2310079G19RikQ9D6L6 185 aa3.98□□□□□ -1.77
Cux1-201ENSMUST00000004097 2210017I01RikA0A0A6YVV1 95 aa3.97□□□□□ -1.77
Cux1-201ENSMUST00000004097 Dnah7cA0A087WR13 4024 aa3.93□□□□□ -1.78
Cux1-201ENSMUST00000004097 Krtap8-1O08633 61 aa3.91□□□□□ -1.78
Cux1-201ENSMUST00000004097 Xirp2Q4U4S6 3784 aa3.89□□□□□ -1.79
Cux1-201ENSMUST00000004097 Gm17416Q30KP4 66 aa3.86□□□□□ -1.79
Cux1-201ENSMUST00000004097 Krtap19-5O08632 62 aa3.86□□□□□ -1.79
Cux1-201ENSMUST00000004097 Dnah7aE9Q0T8 4024 aa3.86□□□□□ -1.79
Cux1-201ENSMUST00000004097 Csmd3Q80T79 3707 aa3.85□□□□□ -1.79
Cux1-201ENSMUST00000004097 BsnO88737 3942 aa3.84□□□□□ -1.8
Cux1-201ENSMUST00000004097 Gm19402J3QJV4 266 aa3.82□□□□□ -1.8
Cux1-201ENSMUST00000004097 Krtap13-1Q8K198 168 aa3.81□□□□□ -1.8
Cux1-201ENSMUST00000004097 Hspg2Q05793 3707 aaKnown RBP3.8□□□□□ -1.8
Cux1-201ENSMUST00000004097 Dnah3Q8BW94 4083 aa3.78□□□□□ -1.8
Cux1-201ENSMUST00000004097 2310046K23RikA0A0A6YVW6 87 aa3.77□□□□□ -1.81
Cux1-201ENSMUST00000004097 Gm17402F6Z0L5 76 aa3.74□□□□□ -1.81
Cux1-201ENSMUST00000004097 Muc6Q80T03 2850 aa3.73□□□□□ -1.81
Cux1-201ENSMUST00000004097 LorP18165 486 aa3.73□□□□□ -1.81
Cux1-201ENSMUST00000004097 Krtap7-1Q9D3I6 87 aa3.68□□□□□ -1.82
Cux1-201ENSMUST00000004097 Dnah7bL7N1Y0 4068 aa3.58□□□□□ -1.84
Cux1-201ENSMUST00000004097 Krtap19-9aF8WH65 55 aa3.56□□□□□ -1.84
Cux1-201ENSMUST00000004097 Dnah6E9Q0B6 4144 aa3.56□□□□□ -1.84
Cux1-201ENSMUST00000004097 Gm11939A2A592 99 aa3.55□□□□□ -1.84
Cux1-201ENSMUST00000004097 Sprr2fO70557 76 aa3.53□□□□□ -1.84
Cux1-201ENSMUST00000004097 Gm38119A0A0A6YX29 146 aa3.52□□□□□ -1.85
Cux1-201ENSMUST00000004097 Lce3bQ9CQM7 98 aa3.5□□□□□ -1.85
Cux1-201ENSMUST00000004097 Kmt2aP55200 3966 aa3.5□□□□□ -1.85
Cux1-201ENSMUST00000004097 Pkhd1E9PZ36 4059 aa3.48□□□□□ -1.85
Cux1-201ENSMUST00000004097 Lce1mQ9CR91 182 aa3.48□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 94.9 ms