RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 BptfA2A654 3036 aaKnown RBP4.62□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 Szt2A2A9C3 3431 aa4.62□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 Igfn1Q3KNY0 2849 aa4.61□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 Vps13aQ5H8C4 3166 aa4.6□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 Tenm4Q3UHK6 2771 aa4.59□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 AtmQ62388 3066 aa4.59□□□□□ -1.67
Pdgfra-201ENSMUST00000000476 Adgrg4B7ZCC9 3073 aa4.59□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 2210017I01RikA0A0A6YVV1 95 aa4.58□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Celsr3Q91ZI0 3301 aa4.58□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 AspmQ8CJ27 3122 aa4.57□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Tex15F8VPN2 2785 aa4.57□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Unc80Q8BLN6 3261 aa4.57□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Gm17402F6Z0L5 76 aa4.56□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Lrrc37aB1AWG4 3215 aa4.55□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Frem2Q6NVD0 3160 aa4.54□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Prm2P07978 107 aa4.54□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Wdfy4E9Q2M9 3149 aa4.53□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 FryE9Q8I9 3020 aa4.53□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Zzef1Q5SSH7 2924 aa4.53□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 NbeaQ9EPN1 2936 aa4.53□□□□□ -1.68
Pdgfra-201ENSMUST00000000476 Dmxl2Q8BPN8 3032 aa4.5□□□□□ -1.69
Pdgfra-201ENSMUST00000000476 Gm9918Q8BUR5 174 aa4.49□□□□□ -1.69
Pdgfra-201ENSMUST00000000476 FrylF8VQ05 3007 aa4.49□□□□□ -1.69
Pdgfra-201ENSMUST00000000476 Pdzd2E9Q1M1 2796 aa4.45□□□□□ -1.7
Pdgfra-201ENSMUST00000000476 Lama1P19137 3084 aa4.45□□□□□ -1.7
Pdgfra-201ENSMUST00000000476 Brca2P97929 3329 aa4.45□□□□□ -1.7
Pdgfra-201ENSMUST00000000476 Tenm3Q9WTS6 2715 aa4.44□□□□□ -1.7
Pdgfra-201ENSMUST00000000476 Gm19668J3QMD1 248 aa4.41□□□□□ -1.7
Pdgfra-201ENSMUST00000000476 Dchs2A0A0A6YW72 3346 aa4.41□□□□□ -1.7
Pdgfra-201ENSMUST00000000476 Gm10318A0A1W2P728 225 aa4.4□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 Gm11939A2A592 99 aa4.39□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 Celsr2Q9R0M0 2920 aa4.38□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 DspE9Q557 2883 aaKnown RBP4.38□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 FlncQ8VHX6 2726 aaKnown RBP4.36□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 Krtap19-5O08632 62 aa4.36□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 Col6a3E9PWQ3 3284 aa4.35□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 Nf1Q04690 2841 aa4.35□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 Krtap13-1Q8K198 168 aa4.35□□□□□ -1.71
Pdgfra-201ENSMUST00000000476 Trank1Q8BV79 2999 aa4.34□□□□□ -1.72
Pdgfra-201ENSMUST00000000476 Tenm2Q9WTS5 2764 aa4.33□□□□□ -1.72
Pdgfra-201ENSMUST00000000476 4933428G20RikQ9D3X4 101 aa4.32□□□□□ -1.72
Pdgfra-201ENSMUST00000000476 LrbaQ9ESE1 2856 aa4.31□□□□□ -1.72
Pdgfra-201ENSMUST00000000476 Crct1Q6PAI5 102 aa4.31□□□□□ -1.72
Pdgfra-201ENSMUST00000000476 Vps13cQ8BX70 3748 aa4.29□□□□□ -1.72
Pdgfra-201ENSMUST00000000476 Tenm1Q9WTS4 2731 aa4.28□□□□□ -1.72
Pdgfra-201ENSMUST00000000476 VcanQ62059 3357 aa4.27□□□□□ -1.73
Pdgfra-201ENSMUST00000000476 Chd9Q8BYH8 2885 aa4.27□□□□□ -1.73
Pdgfra-201ENSMUST00000000476 Krtap3-1A2A591 98 aa4.25□□□□□ -1.73
Pdgfra-201ENSMUST00000000476 Dchs1E9PVD3 3291 aa4.22□□□□□ -1.73
Pdgfra-201ENSMUST00000000476 SpegQ62407 3262 aa4.22□□□□□ -1.73
Pdgfra-201ENSMUST00000000476 Krtap3-2Q9D638 99 aa4.22□□□□□ -1.73
Pdgfra-201ENSMUST00000000476 Krtap3-3Q9D7P0 99 aa4.22□□□□□ -1.73
Pdgfra-201ENSMUST00000000476 Akap9Q70FJ1 3797 aa4.21□□□□□ -1.74
Pdgfra-201ENSMUST00000000476 Wdfy3Q6VNB8 3508 aa4.2□□□□□ -1.74
Pdgfra-201ENSMUST00000000476 Myo15aQ9QZZ4 3511 aa4.2□□□□□ -1.74
Pdgfra-201ENSMUST00000000476 RelnQ60841 3461 aa4.2□□□□□ -1.74
Pdgfra-201ENSMUST00000000476 Megf8P60882 2789 aa4.15□□□□□ -1.74
Pdgfra-201ENSMUST00000000476 DmdP11531 3678 aa4.15□□□□□ -1.75
Pdgfra-201ENSMUST00000000476 Helz2E9QAM5 2947 aaKnown RBP4.13□□□□□ -1.75
Pdgfra-201ENSMUST00000000476 Muc5acE9QAQ8 3455 aa4.12□□□□□ -1.75
Pdgfra-201ENSMUST00000000476 OtogO55225 2910 aa4.07□□□□□ -1.76
Pdgfra-201ENSMUST00000000476 Csmd1Q923L3 3564 aa4.03□□□□□ -1.76
Pdgfra-201ENSMUST00000000476 Ank2Q8C8R3 3898 aa4.03□□□□□ -1.76
Pdgfra-201ENSMUST00000000476 Gm6358A0A087WPH4 74 aa4.01□□□□□ -1.77
Pdgfra-201ENSMUST00000000476 Fbn1Q61554 2873 aaKnown RBP4.01□□□□□ -1.77
Pdgfra-201ENSMUST00000000476 VwfQ8CIZ8 2813 aa4□□□□□ -1.77
Pdgfra-201ENSMUST00000000476 Krtap1-5A2A590 122 aa3.99□□□□□ -1.77
Pdgfra-201ENSMUST00000000476 Gm884A2A9H6 3643 aa3.98□□□□□ -1.77
Pdgfra-201ENSMUST00000000476 Smg1Q8BKX6 3658 aaKnown RBP3.97□□□□□ -1.77
Pdgfra-201ENSMUST00000000476 Sprr2a3Q4KL71 83 aa3.96□□□□□ -1.78
Pdgfra-201ENSMUST00000000476 Sprr2a1Q9CQK8 83 aa3.96□□□□□ -1.78
Pdgfra-201ENSMUST00000000476 Krtap19-9aF8WH65 55 aa3.95□□□□□ -1.78
Pdgfra-201ENSMUST00000000476 Lama5Q61001 3718 aa3.93□□□□□ -1.78
Pdgfra-201ENSMUST00000000476 Huwe1Q7TMY8 4377 aaKnown RBP3.93□□□□□ -1.78
Pdgfra-201ENSMUST00000000476 Krtap8-1O08633 61 aa3.92□□□□□ -1.78
Pdgfra-201ENSMUST00000000476 Krtap7-1Q9D3I6 87 aa3.9□□□□□ -1.78
Pdgfra-201ENSMUST00000000476 Krtap1-4Q3V2D6 188 aa3.88□□□□□ -1.79
Pdgfra-201ENSMUST00000000476 Dnah14A0A140LIJ4 4489 aa3.87□□□□□ -1.79
Pdgfra-201ENSMUST00000000476 SpenQ62504 3644 aaKnown RBP3.87□□□□□ -1.79
Pdgfra-201ENSMUST00000000476 Zfhx4Q9JJN2 3550 aa3.86□□□□□ -1.79
Pdgfra-201ENSMUST00000000476 Gm18596A0A1W2P860 280 aa3.84□□□□□ -1.79
Pdgfra-201ENSMUST00000000476 LorP18165 486 aa3.83□□□□□ -1.8
Pdgfra-201ENSMUST00000000476 Krtap19-9bQ99NG9 58 aa3.82□□□□□ -1.8
Pdgfra-201ENSMUST00000000476 Sprr2kO70562 68 aa3.79□□□□□ -1.8
Pdgfra-201ENSMUST00000000476 Dnah10D3YYQ8 4591 aa3.78□□□□□ -1.8
Pdgfra-201ENSMUST00000000476 Dnah5Q8VHE6 4621 aa3.78□□□□□ -1.8
Pdgfra-201ENSMUST00000000476 Cmya5Q70KF4 3739 aa3.75□□□□□ -1.81
Pdgfra-201ENSMUST00000000476 Krtap12-1Q9Z287 130 aa3.75□□□□□ -1.81
Pdgfra-201ENSMUST00000000476 Gm19402J3QJV4 266 aa3.74□□□□□ -1.81
Pdgfra-201ENSMUST00000000476 Stard9Q80TF6 4561 aa3.72□□□□□ -1.81
Pdgfra-201ENSMUST00000000476 Vps13dB1ART2 4390 aa3.71□□□□□ -1.82
Pdgfra-201ENSMUST00000000476 Col7a1Q63870 2944 aa3.71□□□□□ -1.82
Pdgfra-201ENSMUST00000000476 Dnah17Q69Z23 4481 aa3.69□□□□□ -1.82
Pdgfra-201ENSMUST00000000476 Svep1A2AVA0 3567 aa3.69□□□□□ -1.82
Pdgfra-201ENSMUST00000000476 PlecQ9QXS1 4691 aaKnown RBP3.67□□□□□ -1.82
Pdgfra-201ENSMUST00000000476 Muc6Q80T03 2850 aa3.66□□□□□ -1.82
Pdgfra-201ENSMUST00000000476 Csmd2V9GX34 3611 aa3.61□□□□□ -1.83
Pdgfra-201ENSMUST00000000476 Sprr2gO70558 76 aa3.6□□□□□ -1.83
Pdgfra-201ENSMUST00000000476 LystP97412 3788 aa3.58□□□□□ -1.84
Pdgfra-201ENSMUST00000000476 Dync2h1Q45VK7 4306 aa3.56□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 111.5 ms