RNA–Protein interactions for RNA: ENSMUST00000215295.1

Syne1-205, Transcript of Nesprin-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Syne1, Length 27,908 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-205ENSMUST00000215295 Notch1Q01705 2531 aa2.42□□□□□ -2.02
Syne1-205ENSMUST00000215295 1600014C23RikQ9DAX4 101 aa2.4□□□□□ -2.02
Syne1-205ENSMUST00000215295 BC029722A0A0N4SW31 51 aa2.4□□□□□ -2.03
Syne1-205ENSMUST00000215295 Lce6aD3YV94 81 aa2.39□□□□□ -2.03
Syne1-205ENSMUST00000215295 Krtap24-1G3X9A2 248 aa2.39□□□□□ -2.03
Syne1-205ENSMUST00000215295 Gm5965D3Z724 196 aa2.39□□□□□ -2.03
Syne1-205ENSMUST00000215295 Gm19426M0QWC7 77 aa2.39□□□□□ -2.03
Syne1-205ENSMUST00000215295 FasnP19096 2504 aaKnown RBP2.38□□□□□ -2.03
Syne1-205ENSMUST00000215295 TrrapQ80YV3 2565 aaKnown RBP2.38□□□□□ -2.03
Syne1-205ENSMUST00000215295 D6Ertd527eA0A0N4SWI3 464 aa2.37□□□□□ -2.03
Syne1-205ENSMUST00000215295 Tnp1P10856 55 aa2.35□□□□□ -2.03
Syne1-205ENSMUST00000215295 2310050C09RikG5E8Z3 280 aa2.35□□□□□ -2.03
Syne1-205ENSMUST00000215295 A930033H14RikG5E8X6 103 aa2.34□□□□□ -2.03
Syne1-205ENSMUST00000215295 Stab1Q8R4Y4 2571 aa2.34□□□□□ -2.03
Syne1-205ENSMUST00000215295 Hectd1Q69ZR2 2618 aaKnown RBP2.33□□□□□ -2.04
Syne1-205ENSMUST00000215295 Krtap29-1A2A5X4 342 aa2.33□□□□□ -2.04
Syne1-205ENSMUST00000215295 Gm20537G3UYK7 97 aa2.33□□□□□ -2.04
Syne1-205ENSMUST00000215295 CenpfE9Q3P4 2997 aaKnown RBP2.33□□□□□ -2.04
Syne1-205ENSMUST00000215295 Gm17349F7BGH6 99 aa2.32□□□□□ -2.04
Syne1-205ENSMUST00000215295 Defb10Q8R2I8 73 aa2.32□□□□□ -2.04
Syne1-205ENSMUST00000215295 PcntP48725 2898 aa2.31□□□□□ -2.04
Syne1-205ENSMUST00000215295 CicQ924A2 2510 aa2.31□□□□□ -2.04
Syne1-205ENSMUST00000215295 Nsd1O88491 2588 aaKnown RBP2.31□□□□□ -2.04
Syne1-205ENSMUST00000215295 Tnp2P11378 117 aa2.3□□□□□ -2.04
Syne1-205ENSMUST00000215295 Gm5767A0A0J9YTU8 78 aa2.3□□□□□ -2.04
Syne1-205ENSMUST00000215295 HrnrQ8VHD8 2496 aa2.29□□□□□ -2.04
Syne1-205ENSMUST00000215295 Defb2P82020 71 aa2.28□□□□□ -2.04
Syne1-205ENSMUST00000215295 Usp24B1AY13 2617 aaKnown RBP2.28□□□□□ -2.05
Syne1-205ENSMUST00000215295 2310079G19RikQ9D6L6 185 aa2.27□□□□□ -2.05
Syne1-205ENSMUST00000215295 Spink7Q6IE32 76 aa2.27□□□□□ -2.05
Syne1-205ENSMUST00000215295 Tex15F8VPN2 2785 aa2.27□□□□□ -2.05
Syne1-205ENSMUST00000215295 Itpr3P70227 2670 aa2.26□□□□□ -2.05
Syne1-205ENSMUST00000215295 AtrQ9JKK8 2635 aa2.26□□□□□ -2.05
Syne1-205ENSMUST00000215295 Stab2Q8R4U0 2559 aa2.26□□□□□ -2.05
Syne1-205ENSMUST00000215295 Hivep1Q03172 2688 aa2.26□□□□□ -2.05
Syne1-205ENSMUST00000215295 B930094E09RikQ8C4T2 136 aa2.25□□□□□ -2.05
Syne1-205ENSMUST00000215295 9530053A07RikE9PVG8 2581 aa2.24□□□□□ -2.05
Syne1-205ENSMUST00000215295 Zfp292Q9Z2U2 2698 aa2.24□□□□□ -2.05
Syne1-205ENSMUST00000215295 TgO08710 2766 aa2.23□□□□□ -2.05
Syne1-205ENSMUST00000215295 Tep1P97499 2629 aa2.23□□□□□ -2.05
Syne1-205ENSMUST00000215295 Igsf10Q3V1M1 2594 aa2.22□□□□□ -2.05
Syne1-205ENSMUST00000215295 Ubr5Q80TP3 2792 aa2.22□□□□□ -2.05
Syne1-205ENSMUST00000215295 Srrm2Q8BTI8 2703 aaKnown RBP2.2□□□□□ -2.06
Syne1-205ENSMUST00000215295 FlnaQ8BTM8 2647 aaKnown RBP2.2□□□□□ -2.06
Syne1-205ENSMUST00000215295 Mast4Q811L6 2618 aa2.2□□□□□ -2.06
Syne1-205ENSMUST00000215295 4933428G20RikQ9D3X4 101 aa2.2□□□□□ -2.06
Syne1-205ENSMUST00000215295 Itpr1P11881 2749 aa2.2□□□□□ -2.06
Syne1-205ENSMUST00000215295 Col6a5A6H584 2640 aa2.2□□□□□ -2.06
Syne1-205ENSMUST00000215295 Nbeal2Q6ZQA0 2742 aa2.2□□□□□ -2.06
Syne1-205ENSMUST00000215295 Akap13E9Q394 2776 aa2.19□□□□□ -2.06
Syne1-205ENSMUST00000215295 Igfn1Q3KNY0 2849 aa2.19□□□□□ -2.06
Syne1-205ENSMUST00000215295 Gm42715A0A087WP63 3095 aaKnown RBP2.17□□□□□ -2.06
Syne1-205ENSMUST00000215295 Pkd1l1Q8R526 2615 aa2.17□□□□□ -2.06
Syne1-205ENSMUST00000215295 Gm9195A0A140LHT4 2805 aa2.17□□□□□ -2.06
Syne1-205ENSMUST00000215295 Zfhx3Q61329 3726 aa2.15□□□□□ -2.06
Syne1-205ENSMUST00000215295 Tnrc18Q80WC3 2878 aa2.15□□□□□ -2.07
Syne1-205ENSMUST00000215295 2210017I01RikA0A0A6YVV1 95 aa2.13□□□□□ -2.07
Syne1-205ENSMUST00000215295 FlnbQ80X90 2602 aaKnown RBP2.13□□□□□ -2.07
Syne1-205ENSMUST00000215295 Lelp1Q9DAE3 120 aa2.13□□□□□ -2.07
Syne1-205ENSMUST00000215295 Ep400Q8CHI8 3072 aaKnown RBP2.13□□□□□ -2.07
Syne1-205ENSMUST00000215295 ApcQ61315 2845 aa2.11□□□□□ -2.07
Syne1-205ENSMUST00000215295 2310061N02RikQ9D6S9 174 aa2.09□□□□□ -2.07
Syne1-205ENSMUST00000215295 Itpr2Q9Z329 2701 aa2.09□□□□□ -2.08
Syne1-205ENSMUST00000215295 FcgbpE9Q0B5 2583 aa2.09□□□□□ -2.08
Syne1-205ENSMUST00000215295 DspE9Q557 2883 aaKnown RBP2.08□□□□□ -2.08
Syne1-205ENSMUST00000215295 KalrnA2CG49 2964 aa2.07□□□□□ -2.08
Syne1-205ENSMUST00000215295 Chd7A2AJK6 2986 aaKnown RBP2.07□□□□□ -2.08
Syne1-205ENSMUST00000215295 SrcapA0A087WQ44 3271 aa2.06□□□□□ -2.08
Syne1-205ENSMUST00000215295 Usp34Q6ZQ93 3582 aa2.06□□□□□ -2.08
Syne1-205ENSMUST00000215295 Dnah12Q3V0Q1 3086 aa2.05□□□□□ -2.08
Syne1-205ENSMUST00000215295 Krtap3-2Q9D638 99 aa2.04□□□□□ -2.08
Syne1-205ENSMUST00000215295 Krtap3-3Q9D7P0 99 aa2.04□□□□□ -2.08
Syne1-205ENSMUST00000215295 Golgb1E9PVZ8 3238 aa2.04□□□□□ -2.08
Syne1-205ENSMUST00000215295 Krtap7-1Q9D3I6 87 aa2.04□□□□□ -2.08
Syne1-205ENSMUST00000215295 Ash1lQ99MY8 2958 aa2.03□□□□□ -2.08
Syne1-205ENSMUST00000215295 Cep350E9Q309 3095 aa2.03□□□□□ -2.08
Syne1-205ENSMUST00000215295 Krtap13-1Q8K198 168 aa2.02□□□□□ -2.09
Syne1-205ENSMUST00000215295 BptfA2A654 3036 aaKnown RBP2.02□□□□□ -2.09
Syne1-205ENSMUST00000215295 Muc2Q80Z19 2680 aa2.02□□□□□ -2.09
Syne1-205ENSMUST00000215295 Dmxl1Q6PNC0 3013 aa2.01□□□□□ -2.09
Syne1-205ENSMUST00000215295 Chd9Q8BYH8 2885 aa2.01□□□□□ -2.09
Syne1-205ENSMUST00000215295 Zzef1Q5SSH7 2924 aa2.01□□□□□ -2.09
Syne1-205ENSMUST00000215295 Pdzd2E9Q1M1 2796 aa2.01□□□□□ -2.09
Syne1-205ENSMUST00000215295 Bod1lE9Q6J5 3032 aa2□□□□□ -2.09
Syne1-205ENSMUST00000215295 FlncQ8VHX6 2726 aaKnown RBP2□□□□□ -2.09
Syne1-205ENSMUST00000215295 NbeaQ9EPN1 2936 aa2□□□□□ -2.09
Syne1-205ENSMUST00000215295 FrylF8VQ05 3007 aa1.99□□□□□ -2.09
Syne1-205ENSMUST00000215295 FryE9Q8I9 3020 aa1.99□□□□□ -2.09
Syne1-205ENSMUST00000215295 Tenm1Q9WTS4 2731 aa1.99□□□□□ -2.09
Syne1-205ENSMUST00000215295 Tenm3Q9WTS6 2715 aa1.99□□□□□ -2.09
Syne1-205ENSMUST00000215295 Prune2Q52KR3 3084 aa1.99□□□□□ -2.09
Syne1-205ENSMUST00000215295 Helz2E9QAM5 2947 aaKnown RBP1.99□□□□□ -2.09
Syne1-205ENSMUST00000215295 LrbaQ9ESE1 2856 aa1.98□□□□□ -2.09
Syne1-205ENSMUST00000215295 Fbn2Q61555 2907 aa1.97□□□□□ -2.09
Syne1-205ENSMUST00000215295 Gm19668J3QMD1 248 aa1.96□□□□□ -2.1
Syne1-205ENSMUST00000215295 Trank1Q8BV79 2999 aa1.96□□□□□ -2.1
Syne1-205ENSMUST00000215295 Nf1Q04690 2841 aa1.96□□□□□ -2.1
Syne1-205ENSMUST00000215295 Lama2Q60675 3118 aaKnown RBP1.95□□□□□ -2.1
Syne1-205ENSMUST00000215295 Krtap3-1A2A591 98 aa1.95□□□□□ -2.1
Syne1-205ENSMUST00000215295 Gm3285A0A1W2P7U0 201 aa1.93□□□□□ -2.1
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms