RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Zcchc13Q9D548 170 aa15.27■□□□□ 0.04
Ubp1-203ENSMUST00000116492 B230307C23RikQ8BLB2 64 aa15.26■□□□□ 0.03
Ubp1-203ENSMUST00000116492 Gm4707V9GXN5 68 aa15.24■□□□□ 0.03
Ubp1-203ENSMUST00000116492 Dync2h1Q45VK7 4306 aa15.24■□□□□ 0.03
Ubp1-203ENSMUST00000116492 TnxbO35452 4006 aa15.24■□□□□ 0.03
Ubp1-203ENSMUST00000116492 Igkv3-4A0A140T8Q4 119 aa15.22■□□□□ 0.03
Ubp1-203ENSMUST00000116492 C130032M10RikQ8C888 123 aa15.22■□□□□ 0.03
Ubp1-203ENSMUST00000116492 Mrpl34Q99N91 92 aa15.22■□□□□ 0.03
Ubp1-203ENSMUST00000116492 Csmd3Q80T79 3707 aa15.22■□□□□ 0.03
Ubp1-203ENSMUST00000116492 Gm10837Q3UTT8 145 aa15.22■□□□□ 0.03
Ubp1-203ENSMUST00000116492 Gm9508A0A1W2P7W0 230 aa15.2■□□□□ 0.02
Ubp1-203ENSMUST00000116492 Gm17521F6QAC8 156 aa15.2■□□□□ 0.02
Ubp1-203ENSMUST00000116492 Gm37013Q8K491 104 aa15.2■□□□□ 0.02
Ubp1-203ENSMUST00000116492 Samd13D3YUG0 102 aa15.19■□□□□ 0.02
Ubp1-203ENSMUST00000116492 Gm17349F7BGH6 99 aa15.19■□□□□ 0.02
Ubp1-203ENSMUST00000116492 BikO70337 150 aa15.17■□□□□ 0.02
Ubp1-203ENSMUST00000116492 TgO08710 2766 aa15.16■□□□□ 0.02
Ubp1-203ENSMUST00000116492 Gm44790A0A0N4SV91 103 aa15.15■□□□□ 0.02
Ubp1-203ENSMUST00000116492 Huwe1Q7TMY8 4377 aaKnown RBP15.14■□□□□ 0.01
Ubp1-203ENSMUST00000116492 Defa27F2Z403 93 aa15.14■□□□□ 0.01
Ubp1-203ENSMUST00000116492 Defa28D3Z1V9 94 aa15.13■□□□□ 0.01
Ubp1-203ENSMUST00000116492 Gm10139O88245 57 aa15.13■□□□□ 0.01
Ubp1-203ENSMUST00000116492 Prr15lQ8JZM2 100 aa15.13■□□□□ 0.01
Ubp1-203ENSMUST00000116492 1700018G05RikA0A1B0GSI2 66 aa15.1■□□□□ 0.01
Ubp1-203ENSMUST00000116492 Wfdc10Q3V2J9 124 aa15.1■□□□□ 0.01
Ubp1-203ENSMUST00000116492 Nupr2Q497P3 102 aa15.08■□□□□ 0.01
Ubp1-203ENSMUST00000116492 UqcrqQ9CQ69 82 aa15.08■□□□□ 0.01
Ubp1-203ENSMUST00000116492 Igkv8-19A0A0G2JFN8 121 aa15.07■□□□□ 0
Ubp1-203ENSMUST00000116492 Phf5aP83870 110 aaKnown RBP15.07■□□□□ 0
Ubp1-203ENSMUST00000116492 AI606181Q8C7B9 129 aa15.07■□□□□ 0
Ubp1-203ENSMUST00000116492 Igsf10Q3V1M1 2594 aa15.06■□□□□ 0
Ubp1-203ENSMUST00000116492 Chchd10Q7TNL9 138 aa15.05■□□□□ 0
Ubp1-203ENSMUST00000116492 Tenm2Q9WTS5 2764 aa15.03■□□□□ -0
Ubp1-203ENSMUST00000116492 Wfdc13Q5DQQ6 81 aa15.03■□□□□ -0
Ubp1-203ENSMUST00000116492 Megf8P60882 2789 aa15.03■□□□□ -0
Ubp1-203ENSMUST00000116492 Q8BT88 171 aa15.02□□□□□ -0.01
Ubp1-203ENSMUST00000116492 1700012A03RikQ9DAF1 130 aa15.02□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Igkv3-10A0A0G2JGN0 119 aa15.01□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Odf3bQ5M8M2 238 aa15.01□□□□□ -0.01
Ubp1-203ENSMUST00000116492 H2al1aQ5M8Q2 105 aa15.01□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Stab2Q8R4U0 2559 aa15□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Dnah11E9Q7N9 4488 aa14.98□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Gm21886J3QJU9 214 aa14.98□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Ube2aQ9Z255 152 aa14.98□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Smlr1J3QMJ4 66 aa14.96□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Muc6Q80T03 2850 aa14.96□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Gm28230A0A0A0MQ91 144 aa14.96□□□□□ -0.01
Ubp1-203ENSMUST00000116492 Defb9Q8R2I6 67 aa14.95□□□□□ -0.02
Ubp1-203ENSMUST00000116492 Q8K1L6 76 aa14.95□□□□□ -0.02
Ubp1-203ENSMUST00000116492 Spink8Q09TK9 105 aa14.94□□□□□ -0.02
Ubp1-203ENSMUST00000116492 Dnah9B1AR51 4484 aa14.93□□□□□ -0.02
Ubp1-203ENSMUST00000116492 Gm10065F6TJM2 114 aa14.92□□□□□ -0.02
Ubp1-203ENSMUST00000116492 Fras1Q80T14 4010 aa14.89□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Igkv3-7A0A0G2JE31 119 aa14.89□□□□□ -0.03
Ubp1-203ENSMUST00000116492 SnurfQ9WU12 71 aa14.89□□□□□ -0.03
Ubp1-203ENSMUST00000116492 6030445D17RikE9Q8F9 148 aa14.88□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Gm27235Q3UW50 83 aa14.87□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Brk1Q91VR8 75 aa14.87□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Gm20604F8WIA3 75 aa14.86□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Pet100P0DJE0 76 aa14.86□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Serp1Q9Z1W5 66 aa14.86□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Plac8Q9JI48 112 aa14.85□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Gm10570F6VB42 170 aa14.84□□□□□ -0.03
Ubp1-203ENSMUST00000116492 Reg3aO09037 175 aa14.83□□□□□ -0.04
Ubp1-203ENSMUST00000116492 Igkv3-5A0A140T8M6 119 aa14.82□□□□□ -0.04
Ubp1-203ENSMUST00000116492 Krtap29-1A2A5X4 342 aa14.82□□□□□ -0.04
Ubp1-203ENSMUST00000116492 PrkdcP97313 4128 aa14.8□□□□□ -0.04
Ubp1-203ENSMUST00000116492 Coa6Q8BGD8 79 aa14.78□□□□□ -0.04
Ubp1-203ENSMUST00000116492 PlecQ9QXS1 4691 aaKnown RBP14.77□□□□□ -0.04
Ubp1-203ENSMUST00000116492 A0A286YE49 62 aa14.74□□□□□ -0.05
Ubp1-203ENSMUST00000116492 HrnrQ8VHD8 2496 aa14.73□□□□□ -0.05
Ubp1-203ENSMUST00000116492 Gm9507D3Z5T3 223 aa14.72□□□□□ -0.05
Ubp1-203ENSMUST00000116492 Gm10642Q3TWM1 71 aa14.72□□□□□ -0.05
Ubp1-203ENSMUST00000116492 Gm9918Q8BUR5 174 aa14.71□□□□□ -0.06
Ubp1-203ENSMUST00000116492 Spint4Q9D263 159 aa14.71□□□□□ -0.06
Ubp1-203ENSMUST00000116492 Gm10337F7DEP7 55 aa14.69□□□□□ -0.06
Ubp1-203ENSMUST00000116492 Pkd1l1Q8R526 2615 aa14.68□□□□□ -0.06
Ubp1-203ENSMUST00000116492 Rpl37aP61514 92 aa14.68□□□□□ -0.06
Ubp1-203ENSMUST00000116492 Atox1O08997 68 aaKnown RBP14.65□□□□□ -0.06
Ubp1-203ENSMUST00000116492 Defb11Q8R2I7 77 aa14.65□□□□□ -0.06
Ubp1-203ENSMUST00000116492 NbdyA0A0N4SUI7 68 aa14.63□□□□□ -0.07
Ubp1-203ENSMUST00000116492 Gm2310J3QNJ2 377 aa14.63□□□□□ -0.07
Ubp1-203ENSMUST00000116492 FasnP19096 2504 aaKnown RBP14.63□□□□□ -0.07
Ubp1-203ENSMUST00000116492 Dph3Q8K0W9 82 aa14.62□□□□□ -0.07
Ubp1-203ENSMUST00000116492 Mrpl55Q9CZ83 127 aa14.62□□□□□ -0.07
Ubp1-203ENSMUST00000116492 Znf706Q9D115 76 aaKnown RBP14.6□□□□□ -0.07
Ubp1-203ENSMUST00000116492 Adm2Q7TNK8 150 aa14.59□□□□□ -0.07
Ubp1-203ENSMUST00000116492 1700074P13RikQ9D9G7 251 aa14.57□□□□□ -0.08
Ubp1-203ENSMUST00000116492 A530084C06RikQ3UTW2 186 aa14.54□□□□□ -0.08
Ubp1-203ENSMUST00000116492 Gm28374F6SG70 93 aa14.54□□□□□ -0.08
Ubp1-203ENSMUST00000116492 Gpr15lA0A0B4J1N3 78 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 2310050C09RikG5E8Z3 280 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 Cypt14J3QPF7 87 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 H2al1bA0A087WP11 105 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 H2al1kJ3QP08 105 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 H2al1eQ810S6 105 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 Defb12Q8K4N3 78 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 H2al1mQ9DAD9 105 aa14.53□□□□□ -0.08
Ubp1-203ENSMUST00000116492 Cdc42se1Q8BHL7 80 aa14.5□□□□□ -0.09
Ubp1-203ENSMUST00000116492 Ly6g6cQ9Z1Q4 126 aa14.5□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 6.8 ms