RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Obox2E9PXV9 151 aa4.91□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Spata3Q9D9T6 193 aa4.91□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Hspg2Q05793 3707 aaKnown RBP4.91□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Gm37013Q8K491 104 aa4.9□□□□□ -1.62
Bdnf-209ENSMUST00000111050 TgO08710 2766 aa4.9□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Phf5aP83870 110 aaKnown RBP4.9□□□□□ -1.63
Bdnf-209ENSMUST00000111050 D730001G18RikA0A087WQU7 115 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Phxr5P08399 672 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Tex15F8VPN2 2785 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 ApcQ61315 2845 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Ankrd11E9Q4F7 2643 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Pdzd2E9Q1M1 2796 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Igkv3-7A0A0G2JE31 119 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Gm20661K7N787 53 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Reg3bP35230 175 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Sprr4Q8CGN8 76 aa4.89□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Usp9yF8VPU6 2556 aa4.88□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Fam168bQ80XQ8 194 aa4.88□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Gm9821Q8K076 103 aa4.87□□□□□ -1.63
Bdnf-209ENSMUST00000111050 FlnaQ8BTM8 2647 aaKnown RBP4.87□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Tenm3Q9WTS6 2715 aa4.86□□□□□ -1.63
Bdnf-209ENSMUST00000111050 P84750 121 aa4.86□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Snhg11Q4G0K9 87 aa4.85□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Myo18bE9PV66 2605 aa4.85□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Dmac1Q9CQ00 111 aa4.85□□□□□ -1.63
Bdnf-209ENSMUST00000111050 Igkv3-12A0A140T8P0 119 aa4.84□□□□□ -1.64
Bdnf-209ENSMUST00000111050 BsnO88737 3942 aa4.84□□□□□ -1.64
Bdnf-209ENSMUST00000111050 TrrapQ80YV3 2565 aaKnown RBP4.83□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Gm28230A0A0A0MQ91 144 aa4.83□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Ccl21aP84444 133 aa4.83□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Defb18Q30KP5 85 aa4.83□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Muc2Q80Z19 2680 aa4.83□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Csmd3Q80T79 3707 aa4.83□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Ighv8-13A0A075B5Y0 101 aa4.82□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Limd2Q8BGB5 128 aa4.82□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Nbeal2Q6ZQA0 2742 aa4.82□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Wfdc10Q3V2J9 124 aa4.81□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Gm16485Q8C4B7 115 aa4.81□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Odf3bQ5M8M2 238 aa4.8□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Tep1P97499 2629 aa4.79□□□□□ -1.64
Bdnf-209ENSMUST00000111050 FlnbQ80X90 2602 aaKnown RBP4.79□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Chchd10Q7TNL9 138 aa4.79□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Igkv3-5A0A140T8M6 119 aa4.78□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Prol1E9PYQ4 312 aa4.78□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Wfdc6bF6ULY1 148 aa4.78□□□□□ -1.64
Bdnf-209ENSMUST00000111050 Gm11565A2A4M7 156 aa4.77□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Gm2310J3QNJ2 377 aa4.77□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Defb13Q8R2I4 64 aa4.77□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Ccl21bP86792 133 aa4.76□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Ccl21cP86793 133 aa4.76□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Plac8Q9JI48 112 aa4.76□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Notch1Q01705 2531 aa4.76□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Gm4707V9GXN5 68 aa4.75□□□□□ -1.65
Bdnf-209ENSMUST00000111050 1700012A03RikQ9DAF1 130 aa4.75□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Gm11627A6PWP4 55 aa4.74□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Gm3250E9Q1M3 230 aa4.74□□□□□ -1.65
Bdnf-209ENSMUST00000111050 2310034C09RikQ9D746 214 aa4.73□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Ank2Q8C8R3 3898 aa4.73□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Gm12216A0A1W2P827 62 aa4.72□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Krtap24-1G3X9A2 248 aa4.72□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Sslp1Q3UN54 99 aa4.72□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Krtap4-1Q3UUY3 169 aa4.72□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Srrm2Q8BTI8 2703 aaKnown RBP4.72□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Usp24B1AY13 2617 aaKnown RBP4.72□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Uqcr11Q9CPX8 56 aa4.72□□□□□ -1.65
Bdnf-209ENSMUST00000111050 Sprr1aQ62266 144 aa4.71□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Fbn1Q61554 2873 aaKnown RBP4.71□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Tenm2Q9WTS5 2764 aa4.7□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Gm3233E9Q2H5 230 aa4.7□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Q8BGJ3 129 aa4.7□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Hectd1Q69ZR2 2618 aaKnown RBP4.69□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Gm21798J3QNU5 87 aa4.69□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Unc79Q0KK59 2596 aa4.68□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Gm10139O88245 57 aa4.68□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Cypt15B1AXS0 87 aa4.67□□□□□ -1.66
Bdnf-209ENSMUST00000111050 AplnQ9R0R4 77 aa4.67□□□□□ -1.66
Bdnf-209ENSMUST00000111050 SycnQ8VCK7 134 aa4.66□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Znf706Q9D115 76 aaKnown RBP4.66□□□□□ -1.66
Bdnf-209ENSMUST00000111050 Col6a5A6H584 2640 aa4.66□□□□□ -1.66
Bdnf-209ENSMUST00000111050 AtrQ9JKK8 2635 aa4.66□□□□□ -1.66
Bdnf-209ENSMUST00000111050 FasnP19096 2504 aaKnown RBP4.65□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Nsd1O88491 2588 aaKnown RBP4.63□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Mp68P56379 58 aa4.63□□□□□ -1.67
Bdnf-209ENSMUST00000111050 VwfQ8CIZ8 2813 aa4.63□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Kmt2bO08550 2713 aa4.63□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Tenm1Q9WTS4 2731 aa4.62□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Defb2P82020 71 aa4.62□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Q8K1L6 76 aa4.61□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Cypt14J3QPF7 87 aa4.61□□□□□ -1.67
Bdnf-209ENSMUST00000111050 6030445D17RikE9Q8F9 148 aa4.6□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Megf8P60882 2789 aa4.6□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Itpr2Q9Z329 2701 aa4.6□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Gm10999F6Q4M4 69 aa4.59□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Erdr1J3QMM0 206 aa4.59□□□□□ -1.67
Bdnf-209ENSMUST00000111050 Dnah7bL7N1Y0 4068 aa4.58□□□□□ -1.68
Bdnf-209ENSMUST00000111050 Dnah11E9Q7N9 4488 aa4.57□□□□□ -1.68
Bdnf-209ENSMUST00000111050 Defb1P56386 69 aa4.57□□□□□ -1.68
Bdnf-209ENSMUST00000111050 Gm7138L7N2C3 230 aa4.56□□□□□ -1.68
Bdnf-209ENSMUST00000111050 Wfdc3Q14AE4 130 aa4.56□□□□□ -1.68
Bdnf-209ENSMUST00000111050 Gm3238W4VSP7 230 aa4.56□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms