RNA–Protein interactions for RNA: ENSMUST00000053716.7

Clrn3-201, Transcript of Clarin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn3, Length 3,305 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3-201ENSMUST00000053716 Defb40Q70KL2 73 aa4.29□□□□□ -1.72
Clrn3-201ENSMUST00000053716 Mrpl34Q99N91 92 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 AplnQ9R0R4 77 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 Csmd3Q80T79 3707 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 FlnbQ80X90 2602 aaKnown RBP4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 Krtap10-4Q08EG8 221 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 Stab1Q8R4Y4 2571 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 Gm37389A0A0A6YW05 95 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 Gm44790A0A0N4SV91 103 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 PscaP57096 123 aa4.28□□□□□ -1.72
Clrn3-201ENSMUST00000053716 Srrm2Q8BTI8 2703 aaKnown RBP4.27□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Dmac1Q9CQ00 111 aa4.27□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Igkv8-19A0A0G2JFN8 121 aa4.26□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Wfdc6bF6ULY1 148 aa4.26□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Hivep1Q03172 2688 aa4.26□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Igkv3-4A0A140T8Q4 119 aa4.26□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Gm17521F6QAC8 156 aa4.26□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Vpreb3D3Z6J4 130 aa4.25□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Gm16485Q8C4B7 115 aa4.25□□□□□ -1.73
Clrn3-201ENSMUST00000053716 A930002H24RikQ8C8Y3 163 aa4.25□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Defb12Q8K4N3 78 aa4.25□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Defa28D3Z1V9 94 aa4.25□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Coa6Q8BGD8 79 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Krtap31-2Q8CAY5 177 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Dnah1E9Q8T7 4250 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Dnah10D3YYQ8 4591 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Gm11627A6PWP4 55 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Sprr1aQ62266 144 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 HrnrQ8VHD8 2496 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 H2al1bA0A087WP11 105 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Igkv3-12A0A140T8P0 119 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 1700018G05RikA0A1B0GSI2 66 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Obox2E9PXV9 151 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 H2al1kJ3QP08 105 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 H2al1eQ810S6 105 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 H2al1mQ9DAD9 105 aa4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Nsd1O88491 2588 aaKnown RBP4.24□□□□□ -1.73
Clrn3-201ENSMUST00000053716 VwfQ8CIZ8 2813 aa4.23□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Ube2bP63147 152 aa4.23□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Spint4Q9D263 159 aa4.22□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Dnah14A0A140LIJ4 4489 aa4.22□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Gm16181B0V2H2 73 aa4.22□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Gm37013Q8K491 104 aa4.22□□□□□ -1.73
Clrn3-201ENSMUST00000053716 TgO08710 2766 aa4.22□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Prol1E9PYQ4 312 aa4.21□□□□□ -1.73
Clrn3-201ENSMUST00000053716 Cdc42se1Q8BHL7 80 aa4.21□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Gm10197F6QEY5 67 aa4.21□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Gm21886J3QJU9 214 aa4.21□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Dnah17Q69Z23 4481 aa4.2□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Gm12353A2AGJ4 60 aa4.2□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Wfdc13Q5DQQ6 81 aa4.2□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Dnah6E9Q0B6 4144 aa4.2□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Reg3aO09037 175 aa4.2□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Coa5Q99M07 74 aa4.2□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Gm7137J3QMW1 236 aa4.19□□□□□ -1.74
Clrn3-201ENSMUST00000053716 U90926O08546 118 aa4.19□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Sslp1Q3UN54 99 aa4.19□□□□□ -1.74
Clrn3-201ENSMUST00000053716 AI606181Q8C7B9 129 aa4.18□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Atox1O08997 68 aaKnown RBP4.18□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Igkv3-10A0A0G2JGN0 119 aa4.17□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Fam104aA2A6P4 185 aa4.17□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Odf3bQ5M8M2 238 aa4.17□□□□□ -1.74
Clrn3-201ENSMUST00000053716 A0A286YE49 62 aa4.17□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Rpl37aP61514 92 aa4.16□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Gm28230A0A0A0MQ91 144 aa4.16□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Zcchc13Q9D548 170 aa4.16□□□□□ -1.74
Clrn3-201ENSMUST00000053716 1700074P13RikQ9D9G7 251 aa4.16□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Dnah11E9Q7N9 4488 aa4.16□□□□□ -1.74
Clrn3-201ENSMUST00000053716 Fn1P11276 2477 aaKnown RBP4.15□□□□□ -1.75
Clrn3-201ENSMUST00000053716 B9d2Q3UK10 175 aa4.15□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Gm10139O88245 57 aa4.13□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Megf8P60882 2789 aa4.13□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Ube2aQ9Z255 152 aa4.13□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Igkv3-7A0A0G2JE31 119 aa4.13□□□□□ -1.75
Clrn3-201ENSMUST00000053716 SycnQ8VCK7 134 aa4.13□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Dnah9B1AR51 4484 aa4.12□□□□□ -1.75
Clrn3-201ENSMUST00000053716 FasnP19096 2504 aaKnown RBP4.12□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Chchd10Q7TNL9 138 aa4.12□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Tenm2Q9WTS5 2764 aa4.12□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Phf5aP83870 110 aaKnown RBP4.11□□□□□ -1.75
Clrn3-201ENSMUST00000053716 9530053A07RikE9PVG8 2581 aa4.1□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Gm10267M0QWD8 85 aa4.1□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Chtf8P0CG14 533 aa4.1□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Gm2310J3QNJ2 377 aa4.09□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Phxr4P15974 95 aa4.09□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Muc6Q80T03 2850 aa4.09□□□□□ -1.75
Clrn3-201ENSMUST00000053716 Gm9508A0A1W2P7W0 230 aa4.09□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Gm10837Q3UTT8 145 aa4.09□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Wfdc10Q3V2J9 124 aa4.09□□□□□ -1.76
Clrn3-201ENSMUST00000053716 4933415A04RikQ9D443 101 aa4.08□□□□□ -1.76
Clrn3-201ENSMUST00000053716 2310061N02RikQ9D6S9 174 aa4.08□□□□□ -1.76
Clrn3-201ENSMUST00000053716 OxtP35454 125 aa4.08□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Dync2h1Q45VK7 4306 aa4.07□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Wfdc17Q5SSJ1 76 aa4.07□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Stab2Q8R4U0 2559 aa4.06□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Igkv3-5A0A140T8M6 119 aa4.06□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Igsf10Q3V1M1 2594 aa4.05□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Defb38Q7TNV7 63 aa4.05□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Defb9Q8R2I6 67 aa4.05□□□□□ -1.76
Clrn3-201ENSMUST00000053716 Huwe1Q7TMY8 4377 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms