RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Megf8P60882 2789 aa14,3□□□□□ -0,12
Ptx3-201ENSMUST00000029421 Wfdc6bF6ULY1 148 aa14,29□□□□□ -0,12
Ptx3-201ENSMUST00000029421 Vpreb1P13372 142 aa14,29□□□□□ -0,12
Ptx3-201ENSMUST00000029421 A330070K13RikQ8CA53 115 aa14,29□□□□□ -0,12
Ptx3-201ENSMUST00000029421 Gm11011D3Z3L9 86 aa14,29□□□□□ -0,12
Ptx3-201ENSMUST00000029421 Sprr1aQ62266 144 aa14,29□□□□□ -0,12
Ptx3-201ENSMUST00000029421 BaalcQ8VHV1 145 aa14,28□□□□□ -0,12
Ptx3-201ENSMUST00000029421 A0A286YE02 88 aa14,27□□□□□ -0,12
Ptx3-201ENSMUST00000029421 Gm10401E9Q3K6 71 aa14,27□□□□□ -0,12
Ptx3-201ENSMUST00000029421 P84750 121 aa14,27□□□□□ -0,12
Ptx3-201ENSMUST00000029421 SnurfQ9WU12 71 aa14,27□□□□□ -0,12
Ptx3-201ENSMUST00000029421 Muc6Q80T03 2850 aa14,26□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Igkv3-2A0A075B5P0 119 aa14,25□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Gm37013Q8K491 104 aa14,25□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Obox2E9PXV9 151 aa14,25□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Igkv3-12A0A140T8P0 119 aa14,24□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Smim29Q8R043 75 aa14,23□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Igkv3-4A0A140T8Q4 119 aa14,22□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Defa27F2Z403 93 aa14,22□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Q8BT88 171 aa14,21□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Prr15lQ8JZM2 100 aa14,21□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Mrpl34Q99N91 92 aa14,21□□□□□ -0,13
Ptx3-201ENSMUST00000029421 Gm10337F7DEP7 55 aa14,2□□□□□ -0,14
Ptx3-201ENSMUST00000029421 Tenm2Q9WTS5 2764 aa14,19□□□□□ -0,14
Ptx3-201ENSMUST00000029421 Gm9507D3Z5T3 223 aa14,19□□□□□ -0,14
Ptx3-201ENSMUST00000029421 Vpreb3D3Z6J4 130 aa14,19□□□□□ -0,14
Ptx3-201ENSMUST00000029421 Gm10570F6VB42 170 aa14,18□□□□□ -0,14
Ptx3-201ENSMUST00000029421 C130032M10RikQ8C888 123 aa14,18□□□□□ -0,14
Ptx3-201ENSMUST00000029421 Fras1Q80T14 4010 aa14,18□□□□□ -0,14
Ptx3-201ENSMUST00000029421 PrkdcP97313 4128 aa14,17□□□□□ -0,14
Ptx3-201ENSMUST00000029421 Gm9918Q8BUR5 174 aa14,16□□□□□ -0,14
Ptx3-201ENSMUST00000029421 Dph3Q8K0W9 82 aa14,14□□□□□ -0,15
Ptx3-201ENSMUST00000029421 Defb40Q70KL2 73 aa14,14□□□□□ -0,15
Ptx3-201ENSMUST00000029421 PscaP57096 123 aa14,13□□□□□ -0,15
Ptx3-201ENSMUST00000029421 Mrpl55Q9CZ83 127 aa14,12□□□□□ -0,15
Ptx3-201ENSMUST00000029421 Igkv8-19A0A0G2JFN8 121 aa14,12□□□□□ -0,15
Ptx3-201ENSMUST00000029421 U90926O08546 118 aa14,11□□□□□ -0,15
Ptx3-201ENSMUST00000029421 Coa6Q8BGD8 79 aa14,11□□□□□ -0,15
Ptx3-201ENSMUST00000029421 Gm17521F6QAC8 156 aa14,1□□□□□ -0,15
Ptx3-201ENSMUST00000029421 Fam104aA2A6P4 185 aa14,1□□□□□ -0,15
Ptx3-201ENSMUST00000029421 PlecQ9QXS1 4691 aaKnown RBP14,1□□□□□ -0,15
Ptx3-201ENSMUST00000029421 Spink8Q09TK9 105 aa14,08□□□□□ -0,16
Ptx3-201ENSMUST00000029421 Ube2bP63147 152 aa14,08□□□□□ -0,16
Ptx3-201ENSMUST00000029421 Fam168bQ80XQ8 194 aa14,08□□□□□ -0,16
Ptx3-201ENSMUST00000029421 Gm44790A0A0N4SV91 103 aa14,06□□□□□ -0,16
Ptx3-201ENSMUST00000029421 H2al1bA0A087WP11 105 aa14,06□□□□□ -0,16
Ptx3-201ENSMUST00000029421 H2al1kJ3QP08 105 aa14,06□□□□□ -0,16
Ptx3-201ENSMUST00000029421 Nupr2Q497P3 102 aa14,06□□□□□ -0,16
Ptx3-201ENSMUST00000029421 H2al1eQ810S6 105 aa14,06□□□□□ -0,16
Ptx3-201ENSMUST00000029421 H2al1mQ9DAD9 105 aa14,06□□□□□ -0,16
Ptx3-201ENSMUST00000029421 FasnP19096 2504 aaKnown RBP14,05□□□□□ -0,16
Ptx3-201ENSMUST00000029421 A530084C06RikQ3UTW2 186 aa14,05□□□□□ -0,16
Ptx3-201ENSMUST00000029421 Gm10837Q3UTT8 145 aa14,03□□□□□ -0,16
Ptx3-201ENSMUST00000029421 Chchd10Q7TNL9 138 aa14,03□□□□□ -0,16
Ptx3-201ENSMUST00000029421 Cdc42se1Q8BHL7 80 aa14□□□□□ -0,17
Ptx3-201ENSMUST00000029421 Spint4Q9D263 159 aa14□□□□□ -0,17
Ptx3-201ENSMUST00000029421 Gm20604F8WIA3 75 aa13,99□□□□□ -0,17
Ptx3-201ENSMUST00000029421 Igkv3-10A0A0G2JGN0 119 aa13,98□□□□□ -0,17
Ptx3-201ENSMUST00000029421 Dnah11E9Q7N9 4488 aa13,98□□□□□ -0,17
Ptx3-201ENSMUST00000029421 Atox1O08997 68 aaKnown RBP13,97□□□□□ -0,17
Ptx3-201ENSMUST00000029421 SycnQ8VCK7 134 aa13,96□□□□□ -0,17
Ptx3-201ENSMUST00000029421 2310050C09RikG5E8Z3 280 aa13,95□□□□□ -0,18
Ptx3-201ENSMUST00000029421 Ly6g6cQ9Z1Q4 126 aa13,95□□□□□ -0,18
Ptx3-201ENSMUST00000029421 TgO08710 2766 aa13,94□□□□□ -0,18
Ptx3-201ENSMUST00000029421 1700018G05RikA0A1B0GSI2 66 aa13,93□□□□□ -0,18
Ptx3-201ENSMUST00000029421 Gm21886J3QJU9 214 aa13,93□□□□□ -0,18
Ptx3-201ENSMUST00000029421 Zcchc13Q9D548 170 aa13,93□□□□□ -0,18
Ptx3-201ENSMUST00000029421 Defa28D3Z1V9 94 aa13,92□□□□□ -0,18
Ptx3-201ENSMUST00000029421 Plac8Q9JI48 112 aa13,91□□□□□ -0,18
Ptx3-201ENSMUST00000029421 Dnah9B1AR51 4484 aa13,9□□□□□ -0,18
Ptx3-201ENSMUST00000029421 Gm10139O88245 57 aa13,89□□□□□ -0,19
Ptx3-201ENSMUST00000029421 A0A286YE49 62 aa13,88□□□□□ -0,19
Ptx3-201ENSMUST00000029421 AI606181Q8C7B9 129 aa13,87□□□□□ -0,19
Ptx3-201ENSMUST00000029421 1700012A03RikQ9DAF1 130 aa13,85□□□□□ -0,19
Ptx3-201ENSMUST00000029421 Gm28230A0A0A0MQ91 144 aa13,84□□□□□ -0,19
Ptx3-201ENSMUST00000029421 Wfdc10Q3V2J9 124 aa13,84□□□□□ -0,19
Ptx3-201ENSMUST00000029421 Coa5Q99M07 74 aa13,82□□□□□ -0,2
Ptx3-201ENSMUST00000029421 Q8K1L6 76 aa13,8□□□□□ -0,2
Ptx3-201ENSMUST00000029421 Ube2aQ9Z255 152 aa13,8□□□□□ -0,2
Ptx3-201ENSMUST00000029421 Odf3bQ5M8M2 238 aa13,8□□□□□ -0,2
Ptx3-201ENSMUST00000029421 Dnah7aE9Q0T8 4024 aa13,8□□□□□ -0,2
Ptx3-201ENSMUST00000029421 Reg3aO09037 175 aa13,77□□□□□ -0,21
Ptx3-201ENSMUST00000029421 Gm10197F6QEY5 67 aa13,76□□□□□ -0,21
Ptx3-201ENSMUST00000029421 Gm10065F6TJM2 114 aa13,75□□□□□ -0,21
Ptx3-201ENSMUST00000029421 Sox16Q62247 57 aa13,74□□□□□ -0,21
Ptx3-201ENSMUST00000029421 Dnah7cA0A087WR13 4024 aa13,74□□□□□ -0,21
Ptx3-201ENSMUST00000029421 Phf5aP83870 110 aaKnown RBP13,72□□□□□ -0,21
Ptx3-201ENSMUST00000029421 Wfdc13Q5DQQ6 81 aa13,71□□□□□ -0,21
Ptx3-201ENSMUST00000029421 OxtP35454 125 aa13,7□□□□□ -0,22
Ptx3-201ENSMUST00000029421 1700074P13RikQ9D9G7 251 aa13,69□□□□□ -0,22
Ptx3-201ENSMUST00000029421 Defb12Q8K4N3 78 aa13,68□□□□□ -0,22
Ptx3-201ENSMUST00000029421 Defb9Q8R2I6 67 aa13,68□□□□□ -0,22
Ptx3-201ENSMUST00000029421 Krtap29-1A2A5X4 342 aa13,67□□□□□ -0,22
Ptx3-201ENSMUST00000029421 Gm2310J3QNJ2 377 aa13,65□□□□□ -0,22
Ptx3-201ENSMUST00000029421 Krtap10-4Q08EG8 221 aa13,64□□□□□ -0,23
Ptx3-201ENSMUST00000029421 Igkv3-7A0A0G2JE31 119 aa13,63□□□□□ -0,23
Ptx3-201ENSMUST00000029421 Gm27235Q3UW50 83 aa13,61□□□□□ -0,23
Ptx3-201ENSMUST00000029421 Bean1Q9EQG5 255 aa13,61□□□□□ -0,23
Ptx3-201ENSMUST00000029421 Igkv3-5A0A140T8M6 119 aa13,59□□□□□ -0,23
Ptx3-201ENSMUST00000029421 Phxr4P15974 95 aa13,57□□□□□ -0,24
Retrieved 100 of 22,080 RNA–protein pairs in 42,1 ms