RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 AtrQ9JKK8 2635 aa5.51□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 SnurfQ9WU12 71 aa5.51□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Mp68P56379 58 aa5.51□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Q8BGJ3 129 aa5.51□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Fam168bQ80XQ8 194 aa5.51□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 4930507D05RikQ8C9C9 103 aa5.51□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gm10999F6Q4M4 69 aa5.5□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gm10320E9PW43 113 aa5.5□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Limd2Q8BGB5 128 aa5.5□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 1700018G05RikA0A1B0GSI2 66 aa5.5□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gm7138L7N2C3 230 aa5.5□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gm3238W4VSP7 230 aa5.5□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 PolqQ8CGS6 2544 aa5.49□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gpr15lA0A0B4J1N3 78 aa5.48□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Fam104aA2A6P4 185 aa5.48□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Sprr1aQ62266 144 aa5.48□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Zcchc13Q9D548 170 aa5.48□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gm10197F6QEY5 67 aa5.48□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gm17689B3GLJ4 109 aa5.47□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Spint4Q9D263 159 aa5.47□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Rps28P62858 69 aaKnown RBP5.47□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Gm21886J3QJU9 214 aa5.47□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 FlnbQ80X90 2602 aaKnown RBP5.47□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 PtprqP0C5E4 2300 aa5.46□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 Tenm3Q9WTS6 2715 aa5.46□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Gm44790A0A0N4SV91 103 aa5.45□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Phf5aP83870 110 aaKnown RBP5.45□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 SpenQ62504 3644 aaKnown RBP5.45□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Lama5Q61001 3718 aa5.45□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Gm27235Q3UW50 83 aa5.45□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Stab1Q8R4Y4 2571 aa5.44□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 RetnlbQ99P86 105 aa5.44□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Gm20661K7N787 53 aa5.43□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Spaca4Q80ZQ0 127 aa5.43□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Q8BT88 171 aa5.42□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Zfhx3Q61329 3726 aa5.42□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 A330070K13RikQ8CA53 115 aa5.41□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Smim29Q8R043 75 aa5.41□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 Gm36176A0A1W2P8D5 158 aa5.41□□□□□ -1.54
Sf3b1-201ENSMUST00000027127 OtogO55225 2910 aa5.4□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Celsr2Q9R0M0 2920 aa5.39□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Rpl37aP61514 92 aa5.39□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Smg1Q8BKX6 3658 aaKnown RBP5.38□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Gm7137J3QMW1 236 aa5.38□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Gm10065F6TJM2 114 aa5.38□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 A730071L15RikQ8C4X0 137 aa5.38□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Notch1Q01705 2531 aa5.37□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Defb1P56386 69 aa5.36□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Defb9Q8R2I6 67 aa5.36□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Nf1Q04690 2841 aa5.36□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Itpr2Q9Z329 2701 aa5.35□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Pdzd2E9Q1M1 2796 aa5.35□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Gm10139O88245 57 aa5.35□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Akap13E9Q394 2776 aa5.34□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Pla2g10Q9QXX3 151 aa5.34□□□□□ -1.55
Sf3b1-201ENSMUST00000027127 Fn1P11276 2477 aaKnown RBP5.34□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 A530084C06RikQ3UTW2 186 aa5.34□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Fam229bQ8CF36 80 aa5.34□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Csmd1Q923L3 3564 aa5.33□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Nsd1O88491 2588 aaKnown RBP5.33□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Rnase13Q5GAM7 153 aa5.32□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Cystm1Q8K353 104 aa5.32□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Ank2Q8C8R3 3898 aa5.32□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Gm17349F7BGH6 99 aa5.31□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Cdc42se1Q8BHL7 80 aa5.31□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Gm37013Q8K491 104 aa5.3□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 2310061N02RikQ9D6S9 174 aa5.3□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Plac8Q9JI48 112 aa5.3□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Hivep1Q03172 2688 aa5.3□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Chd9Q8BYH8 2885 aa5.29□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 LrbaQ9ESE1 2856 aa5.29□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 NbdyA0A0N4SUI7 68 aa5.29□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Muc5acE9QAQ8 3455 aa5.28□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 Coa5Q99M07 74 aa5.28□□□□□ -1.56
Sf3b1-201ENSMUST00000027127 9530053A07RikE9PVG8 2581 aa5.27□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Cypt14J3QPF7 87 aa5.27□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Igfn1Q3KNY0 2849 aa5.26□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Uqcr11Q9CPX8 56 aa5.26□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 6030445D17RikE9Q8F9 148 aa5.25□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Odf3bQ5M8M2 238 aa5.25□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 OxtP35454 125 aa5.25□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Krtap29-1A2A5X4 342 aa5.23□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Cypt15B1AXS0 87 aa5.23□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 SmcpP15265 143 aa5.23□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 CriptO70333 101 aa5.22□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Tex15F8VPN2 2785 aa5.22□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Phxr4P15974 95 aa5.22□□□□□ -1.57
Sf3b1-201ENSMUST00000027127 Nbeal2Q6ZQA0 2742 aa5.21□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Gm26620Q9CY65 116 aa5.21□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Col6a5A6H584 2640 aa5.2□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Tenm4Q3UHK6 2771 aa5.19□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Gm10643Q3URG9 111 aa5.18□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Srrm2Q8BTI8 2703 aaKnown RBP5.17□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Gm9508A0A1W2P7W0 230 aa5.17□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Gm9821Q8K076 103 aa5.17□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Svep1A2AVA0 3567 aa5.17□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Cmya5Q70KF4 3739 aa5.16□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Igsf10Q3V1M1 2594 aa5.16□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Stab2Q8R4U0 2559 aa5.15□□□□□ -1.58
Sf3b1-201ENSMUST00000027127 Gm16253D3Z167 63 aa5.15□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms